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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3735095..3736505- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005789-T1 ID=KJC3_005789-T1|Name=KJC3_005789-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1411bp|location=Sequence derived from alignment at ch4:3735095..3736505- (Aspergillus niger KJC3)
CTCCCCTCACCCACGTCCATTCGTCCACCTCCACAACCCACCCTCCTCTC
GCCATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCGTCCGCCC
TTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCCC
CCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGC
TTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTGCCAGGTA
TGCAACTATCTCCCATGAAGCCATTGGGTTCCGACGCTCCCTGCGGTGCA
CGATTCCCAATCACAGGGATTCCCACTACCAGTTCCCCGAGACAATTCAC
ACATCTTTCTTGATAATACCACACCAACCCGCGAGTTCCGCCCATATAAC
TAACCACATCTGCCGGTAGATTCGAGAAGGAATTCGACGGTGTTCAGGAT
GTCTTCGAGCTCCAGGTAAGCTAATCTGCCCATATTGCATGATTCCAATT
CGTCCCTATCAATTCCCTTCCCCATAATCAGCAAAGCTGCCATTGGCAGA
TAAAACCGGACCGTCCGCAGCCCCTTGGCGCCATATCAGACACCTTTGCT
GACAAGTTACTGTTCTCCCATCCAGCGTAATCTCAACAACTGCTTCGCCT
ACGATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCT
CGTCGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGGTGCGCT
TCCTCCTCCCCATTCCATCACCGTTTCCTTCCCATGACAATTGAACTTAC
AATGTTTTTCTTTCTCTACAAATAGGTGTCAAGGCCAAGGTCGAGACTCA
GGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGAGC
TGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAAACGTCA
CGTCCCGACATATATCTCGTCATGTTTCCTTTGCTCCTTCCCCCGTCAAT
TGTGATAGGAAAGCTGTATACATACTCTAGAGTGCAGTTGGAATCGATTG
AAGTCGCTGATGTATTCGGTGGGCCGTCTCTGATTAACGCCATCTGCTTC
CGACTTCCTGACTGTCCGGGGGTTGAATGGAGGTGCACGCGTGCTTTTCT
ATACCAGTGCTACTATAAATTTTGTGAGCATTTATCTGTACTCTGTATTA
TTGGTGATAGTGCGGAAAATAAGAGGGTGTCATTTTCTTTTCCATTCCAT
CAATATTTCGCCTCGAGATAGGCTCAATCGAGATGCTGGAGGGGTTGAAC
CGCATGGGACAGTCTGGAGCAGTATGAAGACAATAGCGCTCCGACTAATA
TTGAGGACAGAAAAGGCAGGTTGTTACGCTTGATTATGAGAACTGGGGCA
GCCTCTATACT back to topCoding sequence (CDS) from alignment at ch4:3735095..3736505- >KJC3_005789-T1 ID=KJC3_005789-T1|Name=KJC3_005789-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch4:3735095..3736505- (Aspergillus niger KJC3)
GTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCTTGAG
GCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGGAGCT
CTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTACGATC
TCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCGTCGC
GTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAAGGAA
TTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGATGTCGCCCATCTCCGT
CTTCCGCATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGAGCGG
CTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTATCGCC
CGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACGAGGA
CGAGACATACGAGGAGTTCTCTGCCAGGTGTCAAGGCCAAGGTCGAGACT
CAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCCAGGA
GCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAACGTA
ATCTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGTCCTT
ACCGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCGCTGT
CCGGATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTCAGGATGTCTT
CGAGCTCCAGATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGCGCCG
TCCGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCGGGTG
CAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCTCCGC
TAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTCTCTG
CCAGGTGTCAAGGCCAAGGTCGAGACTCAGGAGCAGTACAAGCAATACCT
TGAGGCCCTTGAGGGTCTCCGCCAGGAGCTGGGTGTTGCTCTCCGTGAGG
AGCTCTACCCCGAGGAGGCGTAACGTAATCTCAACAACTGCTTCGCCTAC
GATCTCGTTCCCTCCGTTGAGGTCCTTACCGCTGCTCTGAAGGCTGCTCG
TCGCGTCAACGACTACCCCACCGCTGTCCGGATCTTCGAGGATTCGAGAA
GGAATTCGACGGTGTTCAGGATGTCTTCGAGCTCCAGATGTCGCCCATCT
CCGTCTTCCGCATCGCGACCCGCGCCGTCCGCCCTTCCGGCTTCATCAGA
GCGGCTCAATTGCCCCGTCCCCGGGTGCAGGCCCCCGTTGCTCTGGCTAT
CGCCCGTCCCAGCTTCAGCACCTCCGCTAAGCGCTTCGGCGGTCACCACG
AGGACGAGACATACGAGGAGTTCTCTGCCAGGTGTCAAGGCCAAGGTCGA
GACTCAGGAGCAGTACAAGCAATACCTTGAGGCCCTTGAGGGTCTCCGCC
AGGAGCTGGGTGTTGCTCTCCGTGAGGAGCTCTACCCCGAGGAGGCGTAA
CGTAATCTCAACAACTGCTTCGCCTACGATCTCGTTCCCTCCGTTGAGGT
CCTTACCGCTGCTCTGAAGGCTGCTCGTCGCGTCAACGACTACCCCACCG
CTGTCCGGATCTTCGAGGATTCGAGAAGGAATTCGACGGTGTTCAGGATG
TCTTCGAGCTCCAGATGTCGCCCATCTCCGTCTTCCGCATCGCGACCCGC
GCCGTCCGCCCTTCCGGCTTCATCAGAGCGGCTCAATTGCCCCGTCCCCG
GGTGCAGGCCCCCGTTGCTCTGGCTATCGCCCGTCCCAGCTTCAGCACCT
CCGCTAAGCGCTTCGGCGGTCACCACGAGGACGAGACATACGAGGAGTTC
TCTGCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005743 | mitochondrial inner membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004129 | cytochrome-c oxidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005789-T1.utr3p1 | KJC3_005789-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005789-T1.utr5p1 | KJC3_005789-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926522L |
| DBxref | InterPro:IPR036545 |
| DBxref | InterPro:IPR003204 |
| DBxref | PFAM:PF02284 |
| Product | Cytochrome c oxidase subunit 6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3735095..3736505 - |
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