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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3738281..3739427+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005790-T1 ID=KJC3_005790-T1|Name=KJC3_005790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1147bp|location=Sequence derived from alignment at ch4:3738281..3739427+ (Aspergillus niger KJC3)
ATGGATGTCCTGCAAAGTCTGCCTTTGCCGTCAATTGACCGGCCGTTTGG
TATCCACCTATGGCCTATCTTCGACAAGGCCTTCGAGCTGGTGGTGGGCT
ATCCTGCCAGCGAGTTTCGCTTTGAAGAAGGCGTGACGCCCATGTCTACT
TTCAAGGAAACCGCCATTGCGCTCGTTGCCTACTATGTCATCATCTTTGG
TGGCCGTGAGTTCATGAAGAACAGACCTGCCTTCAAGCTCAACACGCTTT
TCATGATCCACAACCTTTACCTCACCCTGATCAGCGGCACTCTCTTGGCT
CTCTTCATTGAGCAGCTTCTCCCTACTGTCTGGAGACATGGTATCTTCTA
TGCTATCTGTGACCACGACGGTGGATGGACGCGGCCTCTTATCGTTCTGT
ACTATGTGAGTACTCACGGCGCGGGACAAGTTTCGCTACGATCGGATCCG
GTATGCTAACGATATCGCGAATAGCTCAACTATTTGACCAAGTACCTCGA
ACTCATTGACACCGTCTTCCTGTTCCTCAAGAAGAAGCCTCTTACCTTCC
TTCATACCTACCACCACGGTGCCACCGCGCTTCTCTGCTATACCCAGCTT
ATTGGCTTGACTGCGGTTCAGTGGGTTGTCATTGATATCAACCTCCTGGT
GCACGTCGTCATGTACTGGTACTACTTCCAGAGTGCCCGTGGTATCCGTA
TCTGGTGGAAGGAGTGGATCACCCGTCTCCAGATTATTCAGTTCGTCATC
GATCTCGGTTAGTAACCATTTCCAGCTCCGCATCGCTTCAACTAACCAGG
TGACAGGCTTCATCTACTTCGCTTCTTACACCTACTTCTCCTCTACTTAC
TTCCCCTGGGCTCCCAACATGGGCAAGTGCGCCGGCGAGGAGTTTGCCGC
TTTCTCCGGCATGGCTGTCATCAGCTCTTACCTCTTCCTCTTCATCTCCT
TCTACGTCGCTACCTACAAGAAGGCTGCCAAGGCCGGCCGTCCCCGCCGC
AACACTGGCAAGCAGGCTGTTATTGACATGGCCAAGTTCGAGGTCTCTTC
GCCGAACGCTGACGCCAAGGGCAACGCCAAGTCCAACGGAGCTGCTGTGT
CGACCGGCCGTGCCAATGGCCCGGTTACCCGCTCCCGCAAGGCTTAA back to topCoding sequence (CDS) from alignment at ch4:3738281..3739427+ >KJC3_005790-T1 ID=KJC3_005790-T1|Name=KJC3_005790-T1|organism=Aspergillus niger KJC3|type=CDS|length=3087bp|location=Sequence derived from alignment at ch4:3738281..3739427+ (Aspergillus niger KJC3)
ATGGATGTCCTGCAAAGTCTGCCTTTGCCGTCAATTGACCGGCCGTTTGG
TATCCACCTATGGCCTATCTTCGACAAGGCCTTCGAGCTGGTGGTGGGCT
ATCCTGCCAGCGAGTTTCGCTTTGAAGAAGGCGTGACGCCCATGTCTACT
TTCAAGGAAACCGCCATTGCGCTCGTTGCCTACTATGTCATCATCTTTGG
TGGCCGTGAGTTCATGAAGAACAGACCTGCCTTCAAGCTCAACACGCTTT
TCATGATCCACAACCTTTACCTCACCCTGATCAGCGGCACTCTCTTGGCT
CTCTTCATTGAGCAGCTTCTCCCTACTGTCTGGAGACATGGTATCTTCTA
TGCTATCTGTGACCACGACGGTGGATGGACGCGGCCTCTTATCGTTCTGT
ACTATCTCAACTATTTGACCAAGTACCTCGAACTCATTGACACCGTCTTC
CTGTTCCTCAAGAAGAAGCCTCTTACCTTCCTTCATACCTACCACCACGG
TGCCACCGCGCTTCTCTGCTATACCCAGCTTATTGGCTTGACTGCGGTTC
AGTGGGTTGTCATTGATATCAACCTCCTGGTGCACGTCGTCATGTACTGG
TACTACTTCCAGAGTGCCCGTGGTATCCGTATCTGGTGGAAGGAGTGGAT
CACCCGTCTCCAGATTATTCAGTTCGTCATCGATCTCGGCTTCATCTACT
TCGCTTCTTACACCTACTTCTCCTCTACTTACTTCCCCTGGGCTCCCAAC
ATGGGCAAGTGCGCCGGCGAGGAGTTTGCCGCTTTCTCCGGCATGGCTGT
CATCAGCTCTTACCTCTTCCTCTTCATCTCCTTCTACGTCGCTACCTACA
AGAAGGCTGCCAAGGCCGGCCGTCCCCGCCGCAACACTGGCAAGCAGGCT
GTTATTGACATGGCCAAGTTCGAGGTCTCTTCGCCGAACGCTGACGCCAA
GGGCAACGCCAAGTCCAACGGAGCTGCTGTGTCGACCGGCCGTGCCAATG
GCCCGGTTACCCGCTCCCGCAAGGCTTAAATGGATGTCCTGCAAAGTCTG
CCTTTGCCGTCAATTGACCGGCCGTTTGGTATCCACCTATGGCCTATCTT
CGACAAGGCCTTCGAGCTGGTGGTGGGCTATCCTGCCAGCGAGTTTCGCT
TTGAAGAAGGCGTGACGCCCATGTCTACTTTCAAGGAAACCGCCATTGCG
CTCGTTGCCTACTATGTCATCATCTTTGGTGGCCGTGAGTTCATGAAGAA
CAGACCTGCCTTCAAGCTCAACACGCTTTTCATGATCCACAACCTTTACC
TCACCCTGATCAGCGGCACTCTCTTGGCTCTCTTCATTGAGCAGCTTCTC
CCTACTGTCTGGAGACATGGTATCTTCTATGCTATCTGTGACCACGACGG
TGGATGGACGCGGCCTCTTATCGTTCTGTACTATCTCAACTATTTGACCA
AGTACCTCGAACTCATTGACACCGTCTTCCTGTTCCTCAAGAAGAAGCCT
CTTACCTTCCTTCATACCTACCACCACGGTGCCACCGCGCTTCTCTGCTA
TACCCAGCTTATTGGCTTGACTGCGGTTCAGTGGGTTGTCATTGATATCA
ACCTCCTGGTGCACGTCGTCATGTACTGGTACTACTTCCAGAGTGCCCGT
GGTATCCGTATCTGGTGGAAGGAGTGGATCACCCGTCTCCAGATTATTCA
GTTCGTCATCGATCTCGGCTTCATCTACTTCGCTTCTTACACCTACTTCT
CCTCTACTTACTTCCCCTGGGCTCCCAACATGGGCAAGTGCGCCGGCGAG
GAGTTTGCCGCTTTCTCCGGCATGGCTGTCATCAGCTCTTACCTCTTCCT
CTTCATCTCCTTCTACGTCGCTACCTACAAGAAGGCTGCCAAGGCCGGCC
GTCCCCGCCGCAACACTGGCAAGCAGGCTGTTATTGACATGGCCAAGTTC
GAGGTCTCTTCGCCGAACGCTGACGCCAAGGGCAACGCCAAGTCCAACGG
AGCTGCTGTGTCGACCGGCCGTGCCAATGGCCCGGTTACCCGCTCCCGCA
AGGCTTAAATGGATGTCCTGCAAAGTCTGCCTTTGCCGTCAATTGACCGG
CCGTTTGGTATCCACCTATGGCCTATCTTCGACAAGGCCTTCGAGCTGGT
GGTGGGCTATCCTGCCAGCGAGTTTCGCTTTGAAGAAGGCGTGACGCCCA
TGTCTACTTTCAAGGAAACCGCCATTGCGCTCGTTGCCTACTATGTCATC
ATCTTTGGTGGCCGTGAGTTCATGAAGAACAGACCTGCCTTCAAGCTCAA
CACGCTTTTCATGATCCACAACCTTTACCTCACCCTGATCAGCGGCACTC
TCTTGGCTCTCTTCATTGAGCAGCTTCTCCCTACTGTCTGGAGACATGGT
ATCTTCTATGCTATCTGTGACCACGACGGTGGATGGACGCGGCCTCTTAT
CGTTCTGTACTATCTCAACTATTTGACCAAGTACCTCGAACTCATTGACA
CCGTCTTCCTGTTCCTCAAGAAGAAGCCTCTTACCTTCCTTCATACCTAC
CACCACGGTGCCACCGCGCTTCTCTGCTATACCCAGCTTATTGGCTTGAC
TGCGGTTCAGTGGGTTGTCATTGATATCAACCTCCTGGTGCACGTCGTCA
TGTACTGGTACTACTTCCAGAGTGCCCGTGGTATCCGTATCTGGTGGAAG
GAGTGGATCACCCGTCTCCAGATTATTCAGTTCGTCATCGATCTCGGCTT
CATCTACTTCGCTTCTTACACCTACTTCTCCTCTACTTACTTCCCCTGGG
CTCCCAACATGGGCAAGTGCGCCGGCGAGGAGTTTGCCGCTTTCTCCGGC
ATGGCTGTCATCAGCTCTTACCTCTTCCTCTTCATCTCCTTCTACGTCGC
TACCTACAAGAAGGCTGCCAAGGCCGGCCGTCCCCGCCGCAACACTGGCA
AGCAGGCTGTTATTGACATGGCCAAGTTCGAGGTCTCTTCGCCGAACGCT
GACGCCAAGGGCAACGCCAAGTCCAACGGAGCTGCTGTGTCGACCGGCCG
TGCCAATGGCCCGGTTACCCGCTCCCGCAAGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030457 |
| DBxref | InterPro:IPR002076 |
| DBxref | PFAM:PF01151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3738281..3739427 + |
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