You are here

Home

KJC3_005824-T1, KJC3_005824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005824-T1
Unique NameKJC3_005824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3859262..3861713-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005824-T1 ID=KJC3_005824-T1|Name=KJC3_005824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2452bp|location=Sequence derived from alignment at ch4:3859262..3861713- (Aspergillus niger KJC3)
GGGTTGAAGAAGCATAGACGTCATATCTTGAAAATACCATAAGATACAAT
GGGAGCTTCACGATAATAGTAGATAACAGAATAACGTGCAAGCGTCTCCC
TCTGCGTTTTCGAGTCTTTGCTCTGGCCAGTCCTTTGGCATCAATATTCA
AAGCCCTTTGGGGCGTTGTGACTTGTCGCAGAATGTCGCGAACCCAGGCC
TAAGGCCACCATGGCCTGGGCCCGGGCTACGCACTTCAACCAAATCCAGC
AGTTACAGAATGGAGTACCCCTGTTGCAAGATGACGTAAGGTCGAGTTCT
GCAGTCCCCATTGAAACGATTGTATCAACACCGGCGTGACACGCCCTCTT
ACCAGATATTCCACTTAATATAATTGCACTTCGCAATAAACTGGGGAGTC
ATTGACACATAGTAGAGTTTCCAGGGAGTTTCGTAGCCAATGTAAGATAC
TAAAAGCTCAATGTCTTAAAGCACAGCCGCAAATTAGCAGACTGATAGCC
CCGATTCAGTTTCAGATGAGCGCACTCCTCCTTCCTCCCACTATTGCTCC
ATTTTTGACGCCCGCCCCTTTGTCGTTGCCATTCCAAACGACCAATTATT
CTGGGCATTTCAGGAACCCCGCATATGACCTTTCAATGCTTGGAGTTTCT
TCTAAAATAGCAACAATTGCTCAGCCCTGCTTAGTCATCTACCCTGAACC
CGAAAAGGCGCAAGCGGAGAATCCCTTAAAATCGATCGACGAGAAGACTG
ACCAGGGGATTTGCATGGTGACAAGCATTTCTATCCTGTTCCTGAAGCCG
GAGCTGGTCTCCTTATGCCTTTTGGAGATTGACGATGAGTTCGTTCCACA
ACTTGGTGCTACAGGCAAAGAAGGCGCGCTCTGTCATCAATTACAGAGGG
AGGAAATCAGATGCCAAGAAGAATAATCTGTCCAAGCACGCTGCAGGTTC
ATCATCAGTGTCCTCGTCAGTGTATGTTGAATGCCCCTCGTTGGATTCCG
AGTTCTATGCTTAAGGTTTATGGCGTGTTCATCACTAACATACCCTCGTT
GTACTACTACAGTGTGGAGCTAGTTCCGACTTCTTCCCCCTGGGATCTCC
TCCCAGTCGAGATTCAGATCAAGATATTCGCCCACTGCGGTGTCACGGAT
TTCCTACCATTAAAGCTTGTCTGCAAATCGTTCTATCTGCTGCTTAACTC
GCAGGAACAATGGATTACCCGGCAATACCTCCGTCAACGTCGCCATGGAA
CACTTCCATCCCCAATAGATAGCGAAAGAACATATACTCGGAACCCGGAG
GATGATGCAGTGTTGTTATCGGATTTGTTTCCACCAGCCAAAAGCGCTAA
GGGTGGTCACATATACACTTTCAAGTATATTTCCGGCCTGCGTCGCCGGC
AGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGCAGACCGTGTTATGGAT
CGGTTTGTGCACAGCGAACCGGCGTTTATGAAATCCATGTTCACCTCCAA
AGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACTGCGCGCTTATGGTTTC
ATCTCGCTCCGCTCATGTAAGTAGTGGCCTCCCAACCTCCCGTTTTAGTG
CTCTTCTAACGCATTCCTCTTCATGCAGGTATTATACACTATACTTCCTT
GAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGCGTGA
CTGGGAAGCCGGACGCTTGCCAGTTCCTGTACCCCCACACATCCGTAAAG
CCATGTACCGGGACTTGCAAGTAAAGATAATCAGATCACCCCCTTTTACT
GACACCCCTACCCTCATAGCCACACATCACTGCATGCAACTTCTAGTCTC
ATACTTGCGGTACACTGTACCACCGGATGAGCCTACGGTTTCGGATGACA
GTTGGATTGGATCGTTGCTTACAGTATCGCCGTTCCTCCGAATAGTGGAG
TACTTCTCCGCTGAGATCGGGGATGGTGGCAATCAGCGGATGCAGCGAAA
GGACTTCATGCACAATTTTCATAATGATATTACATTAAATGAAAAGGACG
ACATCAACATGTTGGTCTTCCAGAATGCCCCGAATGTGCATCTGCATGGT
TCCGTGGAAGATGTCTGGTTCGATGTTGTGAGGGAGGAATTGGCTTTACG
AAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGGTTTGGACAGGATTGC
CTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCAGATGGATGGCGTGCA
TAATGCATTCTGTCGGTTTAGCAAGCATTGCATTCTTTGCATTCACAAGG
CGAGGCGTTTCATCGGGGTTTTGGTGGACTCCATGGTGGAGAATATGTCC
ATCTTCATGACATGAGCTCTTTGCTCATCTGGGTGTTACTCGTTTGGCAT
AACGATTTTAGCAGCGGCTATTACATATAAATGGAGATTTTTTTGCCTTG
AG
back to top

Coding sequence (CDS) from alignment at ch4:3859262..3861713-

>KJC3_005824-T1 ID=KJC3_005824-T1|Name=KJC3_005824-T1|organism=Aspergillus niger KJC3|type=CDS|length=3798bp|location=Sequence derived from alignment at ch4:3859262..3861713- (Aspergillus niger KJC3)
GTATTATACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGC
AGACTAACGTTCTTCTGCGTGACTGGGAAGCCGGACGCTTGCCAGTTCCT
GTACCCCCACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGAT
AATCAGATCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACACATC
ACTGCATGCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGAT
GAGCCTACGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATC
GCCGTTCCTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTG
GCAATCAGCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGAT
ATTACATTAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGC
CCCGAATGTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTG
TGAGGGAGGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGC
GTCATGGTTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCG
CATTCCAGATGGATGGCGTGCATAATGTGGAGCTAGTTCCGACTTCTTCC
CCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATATTCGCCCACTG
CGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAATCGTTCTATC
TGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATACCTCCGTCAA
CGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAAGAACATATAC
TCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTGTTTCCACCAG
CCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTATATTTCCGGC
CTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGCAGA
CCGTGTTATGGATCGGTTTGTGCACAGCGAACCGGCGTTTATGAAATCCA
TGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACTGCG
CGCTTATGGTTTCATCTCGCTCCGCTCATATGAGTTCGTTCCACAACTTG
GTGCTACAGGCAAAGAAGGCGCGCTCTGTCATCAATTACAGAGGGAGGAA
ATCAGATGCCAAGAAGAATAATCTGTCCAAGCACGCTGCAGGTTCATCAT
CAGTGTCCTCGTCAGTGTATTATACACTATACTTCCTTGAAACCTATGCT
CTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGCGTGACTGGGAAGCCGG
ACGCTTGCCAGTTCCTGTACCCCCACACATCCGTAAAGCCATGTACCGGG
ACTTGCAAGTAAAGATAATCAGATCACCCCCTTTTACTGACACCCCTACC
CTCATAGCCACACATCACTGCATGCAACTTCTAGTCTCATACTTGCGGTA
CACTGTACCACCGGATGAGCCTACGGTTTCGGATGACAGTTGGATTGGAT
CGTTGCTTACAGTATCGCCGTTCCTCCGAATAGTGGAGTACTTCTCCGCT
GAGATCGGGGATGGTGGCAATCAGCGGATGCAGCGAAAGGACTTCATGCA
CAATTTTCATAATGATATTACATTAAATGAAAAGGACGACATCAACATGT
TGGTCTTCCAGAATGCCCCGAATGTGCATCTGCATGGTTCCGTGGAAGAT
GTCTGGTTCGATGTTGTGAGGGAGGAATTGGCTTTACGAAAGGCGGCGCC
GCATCATGCAGAGCGCGTCATGGTTTGGACAGGATTGCCTGTCCTATTCA
GCTGCCAAGACTGTCGCATTCCAGATGGATGGCGTGCATAATGTGGAGCT
AGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCA
AGATATTCGCCCACTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTC
TGCAAATCGTTCTATCTGCTGCTTAACTCGCAGGAACAATGGATTACCCG
GCAATACCTCCGTCAACGTCGCCATGGAACACTTCCATCCCCAATAGATA
GCGAAAGAACATATACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCG
GATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTGGTCACATATACACTTT
CAAGTATATTTCCGGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTT
GCTGCTACCTTGCAGACCGTGTTATGGATCGGTTTGTGCACAGCGAACCG
GCGTTTATGAAATCCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGT
GCAAAGGACTACTGCGCGCTTATGGTTTCATCTCGCTCCGCTCATATGAG
TTCGTTCCACAACTTGGTGCTACAGGCAAAGAAGGCGCGCTCTGTCATCA
ATTACAGAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCAAGCAC
GCTGCAGGTTCATCATCAGTGTCCTCGTCAGTGTATTATACACTATACTT
CCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGC
GTGACTGGGAAGCCGGACGCTTGCCAGTTCCTGTACCCCCACACATCCGT
AAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAGATCACCCCCTTT
TACTGACACCCCTACCCTCATAGCCACACATCACTGCATGCAACTTCTAG
TCTCATACTTGCGGTACACTGTACCACCGGATGAGCCTACGGTTTCGGAT
GACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTTCCTCCGAATAGT
GGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATCAGCGGATGCAGC
GAAAGGACTTCATGCACAATTTTCATAATGATATTACATTAAATGAAAAG
GACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAATGTGCATCTGCA
TGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAGGGAGGAATTGGCTT
TACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGGTTTGGACAGGA
TTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCAGATGGATGGCG
TGCATAATGTGGAGCTAGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCA
GTCGAGATTCAGATCAAGATATTCGCCCACTGCGGTGTCACGGATTTCCT
ACCATTAAAGCTTGTCTGCAAATCGTTCTATCTGCTGCTTAACTCGCAGG
AACAATGGATTACCCGGCAATACCTCCGTCAACGTCGCCATGGAACACTT
CCATCCCCAATAGATAGCGAAAGAACATATACTCGGAACCCGGAGGATGA
TGCAGTGTTGTTATCGGATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTG
GTCACATATACACTTTCAAGTATATTTCCGGCCTGCGTCGCCGGCAGACG
CTTTGTTCAAGGCTTTGCTGCTACCTTGCAGACCGTGTTATGGATCGGTT
TGTGCACAGCGAACCGGCGTTTATGAAATCCATGTTCACCTCCAAAGCTG
AGCGCTGTGTCTTCGTGCAAAGGACTACTGCGCGCTTATGGTTTCATCTC
GCTCCGCTCATATGAGTTCGTTCCACAACTTGGTGCTACAGGCAAAGAAG
GCGCGCTCTGTCATCAATTACAGAGGGAGGAAATCAGATGCCAAGAAGAA
TAATCTGTCCAAGCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005824KJC3_005824Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005824-T1KJC3_005824-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005824-T1.cdsKJC3_005824-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005824-T1.utr3p1KJC3_005824-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005824-T1.exon4KJC3_005824-T1.exon4Aspergillus niger KJC3exon
KJC3_005824-T1.exon3KJC3_005824-T1.exon3Aspergillus niger KJC3exon
KJC3_005824-T1.exon2KJC3_005824-T1.exon2Aspergillus niger KJC3exon
KJC3_005824-T1.exon1KJC3_005824-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005824-T1.utr5p2KJC3_005824-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005824-T1.utr5p1KJC3_005824-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.8
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3859262..3861713 -
Powered by Drupal