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KJC3_005833-T1, KJC3_005833-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005833-T1
Unique NameKJC3_005833-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3879571..3881125+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005833-T1 ID=KJC3_005833-T1|Name=KJC3_005833-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1555bp|location=Sequence derived from alignment at ch4:3879571..3881125+ (Aspergillus niger KJC3)
CGTGGACATCTGGACTTCTGCCCATCTGCTAGCCCACCATGGAGGGTCTT
TTTTTCAACGTCAACAGCGGGTATGTCTGCTTTGGTGTCGCCTTCTGTGA
ATTCATTTCTCCAGGTCACTGATCAAGCGTTCATAGTTATATCGAGGGTA
TCGTCCGTGGTTATCGGAACAGCCTCCTAACCGGCCAACACTACTCCAAC
CTGACCCAATGCGAGACGATTGATGGTCCGTCAATTTACAGCTACTCTTT
TGCTCCCTGGATAATTCTAACACTGCCTTGCTTCTCCCAGATGTCAAACT
TCAGCTCGCCCCCGCCTATGGCGACTTCCTCGCCTCCCTCCCTCCTAACC
CTTCTACCTCTGCCCTGGCGGGCAAGATGACGGACAAGCTGGTCGCTGAG
TTCCGCTACCTCCTCGCGCAGGCCACGGGGTCCACCGCCAAATTCCTGCA
ATACCTTACGTACGGGTACATGATCGATAACATCGCACTACTCATCACCG
GTACTCTGCACGAGCGTGACACTCGCGAGCTCCTCGAGCGATGCCACCCC
CTAGGCTGGTTCGAGACGCTGCCTGTACTTTGCGTCGCCACGAACATCGA
AGAACTCTACAACTCTGTGCTGGTTGAGACGCCGCTGGCCGGTTACTTCA
AGAGCAGCCTGAGCCATCAGGATCTGGATGAACTGAACATTGAGATCGTG
CGCAACACGCTTTACAAGAATTACTTGGAGGACTTTCACCAGTTTGTCAC
CACACACCCTGATTTCAAGGGCACTCCCACGCAAGAGGTCATGTCCGAGA
TCCTGCAGTTTGAGGCAGACCGCCGTGCAATTAACATCACGCTGAACTCG
TTTGGAACGGAGCTGTCGAAGCAGGAGCGGAAGAAGCTGTACCCGGAGTT
TGGCAAGCTGTATCCAGAGGGATCGCTGATGCTTTCGCGCGCCGATGATA
TTGAATCCGTGGCTCTGGCTGTAAGCATCTCTGCGGACTACAAGGCATTC
TTTGATGCTGTTGGCCTTACTCAGGGCGGTGGTGGCCTAGGTGGCATGGG
TGGTTCGGATGGAAAGAGTCTGGAGGACCTGTTCTACCAAAAGGAGATGG
AGCTGAGCAAGGTTGTCTTCACACGGCAATTCACCCCGGCCGTGGTGTAC
GCGTGGATGAGACTGAAGGAGCAGGTGAGTTACCGGTTCTCACGAGAACA
GTTTAACATCTACTAACAATGGATCCCAGGAAATCCGCAACGTTACATGG
ATTGCTGAGTGCATTGCCCAAAATCAGAAGGAGAGAATTGGAAACTTCAT
TTCCGTTTTCTAGATACCATCTCTTGTTGTTACCCTGTCTTCGCCCGTTC
TTTCTTGAACTATCCGCCAAAACATGTACTCTTTCCCCGCACCTGTTGCA
CGTGTGACTCTAGGGCGCTTTTGTTTCCTCTCATTTTCGCCGTGTCTAGT
TAGTACCCAGTCCCTGTAATGAGCGCATAAATCGGCCCAGCATATCCATG
CTAGTTGTTTTGGCTCTTCGACCTTTCCTATCTCCGACCCCACGGCGTTT
TGGGA
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Coding sequence (CDS) from alignment at ch4:3879571..3881125+

>KJC3_005833-T1 ID=KJC3_005833-T1|Name=KJC3_005833-T1|organism=Aspergillus niger KJC3|type=CDS|length=4356bp|location=Sequence derived from alignment at ch4:3879571..3881125+ (Aspergillus niger KJC3)
ATGGAGGGTCTTTTTTTCAACGTCAACAGCGGTTATATCGAGGGTATCGT
CCGTGGTTATCGGAACAGCCTCCTAACCGGCCAACACTACTCCAACCTGA
CCCAATGCGAGACGATTGATGATGTCAAACTTCAGCTCGCCCCCGCCTAT
GGCGACTTCCTCGCCTCCCTCCCTCCTAACCCTTCTACCTCTGCCCTGGC
GGGCAAGATGACGGACAAGCTGGTCGCTGAGTTCCGCTACCTCCTCGCGC
AGGCCACGGGGTCCACCGCCAAATTCCTGCAATACCTTACGTACGGGTAC
ATGATCGATAACATCGCACTACTCATCACCGGTACTCTGCACGAGCGTGA
CACTCGCGAGCTCCTCGAGCGATGCCACCCCCTAGGCTGGTTCGAGACGC
TGCCTGTACTTTGCGTCGCCACGAACATCGAAGAACTCTACAACTCTGTG
CTGGTTGAGACGCCGCTGGCCGGTTACTTCAAGAGCAGCCTGAGCCATCA
GGATCTGGATGAACTGAACATTGAGATCGTGCGCAACACGCTTTACAAGA
ATTACTTGGAGGACTTTCACCAGTTTGTCACCACACACCCTGATTTCAAG
GGCACTCCCACGCAAGAGGTCATGTCCGAGATCCTGCAGTTTGAGGCAGA
CCGCCGTGCAATTAACATCACGCTGAACTCGTTTGGAACGGAGCTGTCGA
AGCAGGAGCGGAAGAAGCTGTACCCGGAGTTTGGCAAGCTGTATCCAGAG
GGATCGCTGATGCTTTCGCGCGCCGATGATATTGAATCCGTGGCTCTGGC
TGTAAGCATCTCTGCGGACTACAAGGCATTCTTTGATGCTGTTGGCCTTA
CTCAGGGCGGTGGTGGCCTAGGTGGCATGGGTGGTTCGGATGGAAAGAGT
CTGGAGGACCTGTTCTACCAAAAGGAGATGGAGCTGAGCAAGGTTGTCTT
CACACGGCAATTCACCCCGGCCGTGGTGTACGCGTGGATGAGACTGAAGG
AGCAGGAAATCCGCAACGTTACATGGATTGCTGAGTGCATTGCCCAAAAT
CAGAAGGAGAGAATTGGAAACTTCATTTCCGTTTTCTAGATGGAGGGTCT
TTTTTTCAACGTCAACAGCGGTTATATCGAGGGTATCGTCCGTGGTTATC
GGAACAGCCTCCTAACCGGCCAACACTACTCCAACCTGACCCAATGCGAG
ACGATTGATGATGTCAAACTTCAGCTCGCCCCCGCCTATGGCGACTTCCT
CGCCTCCCTCCCTCCTAACCCTTCTACCTCTGCCCTGGCGGGCAAGATGA
CGGACAAGCTGGTCGCTGAGTTCCGCTACCTCCTCGCGCAGGCCACGGGG
TCCACCGCCAAATTCCTGCAATACCTTACGTACGGGTACATGATCGATAA
CATCGCACTACTCATCACCGGTACTCTGCACGAGCGTGACACTCGCGAGC
TCCTCGAGCGATGCCACCCCCTAGGCTGGTTCGAGACGCTGCCTGTACTT
TGCGTCGCCACGAACATCGAAGAACTCTACAACTCTGTGCTGGTTGAGAC
GCCGCTGGCCGGTTACTTCAAGAGCAGCCTGAGCCATCAGGATCTGGATG
AACTGAACATTGAGATCGTGCGCAACACGCTTTACAAGAATTACTTGGAG
GACTTTCACCAGTTTGTCACCACACACCCTGATTTCAAGGGCACTCCCAC
GCAAGAGGTCATGTCCGAGATCCTGCAGTTTGAGGCAGACCGCCGTGCAA
TTAACATCACGCTGAACTCGTTTGGAACGGAGCTGTCGAAGCAGGAGCGG
AAGAAGCTGTACCCGGAGTTTGGCAAGCTGTATCCAGAGGGATCGCTGAT
GCTTTCGCGCGCCGATGATATTGAATCCGTGGCTCTGGCTGTAAGCATCT
CTGCGGACTACAAGGCATTCTTTGATGCTGTTGGCCTTACTCAGGGCGGT
GGTGGCCTAGGTGGCATGGGTGGTTCGGATGGAAAGAGTCTGGAGGACCT
GTTCTACCAAAAGGAGATGGAGCTGAGCAAGGTTGTCTTCACACGGCAAT
TCACCCCGGCCGTGGTGTACGCGTGGATGAGACTGAAGGAGCAGGAAATC
CGCAACGTTACATGGATTGCTGAGTGCATTGCCCAAAATCAGAAGGAGAG
AATTGGAAACTTCATTTCCGTTTTCTAGATGGAGGGTCTTTTTTTCAACG
TCAACAGCGGTTATATCGAGGGTATCGTCCGTGGTTATCGGAACAGCCTC
CTAACCGGCCAACACTACTCCAACCTGACCCAATGCGAGACGATTGATGA
TGTCAAACTTCAGCTCGCCCCCGCCTATGGCGACTTCCTCGCCTCCCTCC
CTCCTAACCCTTCTACCTCTGCCCTGGCGGGCAAGATGACGGACAAGCTG
GTCGCTGAGTTCCGCTACCTCCTCGCGCAGGCCACGGGGTCCACCGCCAA
ATTCCTGCAATACCTTACGTACGGGTACATGATCGATAACATCGCACTAC
TCATCACCGGTACTCTGCACGAGCGTGACACTCGCGAGCTCCTCGAGCGA
TGCCACCCCCTAGGCTGGTTCGAGACGCTGCCTGTACTTTGCGTCGCCAC
GAACATCGAAGAACTCTACAACTCTGTGCTGGTTGAGACGCCGCTGGCCG
GTTACTTCAAGAGCAGCCTGAGCCATCAGGATCTGGATGAACTGAACATT
GAGATCGTGCGCAACACGCTTTACAAGAATTACTTGGAGGACTTTCACCA
GTTTGTCACCACACACCCTGATTTCAAGGGCACTCCCACGCAAGAGGTCA
TGTCCGAGATCCTGCAGTTTGAGGCAGACCGCCGTGCAATTAACATCACG
CTGAACTCGTTTGGAACGGAGCTGTCGAAGCAGGAGCGGAAGAAGCTGTA
CCCGGAGTTTGGCAAGCTGTATCCAGAGGGATCGCTGATGCTTTCGCGCG
CCGATGATATTGAATCCGTGGCTCTGGCTGTAAGCATCTCTGCGGACTAC
AAGGCATTCTTTGATGCTGTTGGCCTTACTCAGGGCGGTGGTGGCCTAGG
TGGCATGGGTGGTTCGGATGGAAAGAGTCTGGAGGACCTGTTCTACCAAA
AGGAGATGGAGCTGAGCAAGGTTGTCTTCACACGGCAATTCACCCCGGCC
GTGGTGTACGCGTGGATGAGACTGAAGGAGCAGGAAATCCGCAACGTTAC
ATGGATTGCTGAGTGCATTGCCCAAAATCAGAAGGAGAGAATTGGAAACT
TCATTTCCGTTTTCTAGATGGAGGGTCTTTTTTTCAACGTCAACAGCGGT
TATATCGAGGGTATCGTCCGTGGTTATCGGAACAGCCTCCTAACCGGCCA
ACACTACTCCAACCTGACCCAATGCGAGACGATTGATGATGTCAAACTTC
AGCTCGCCCCCGCCTATGGCGACTTCCTCGCCTCCCTCCCTCCTAACCCT
TCTACCTCTGCCCTGGCGGGCAAGATGACGGACAAGCTGGTCGCTGAGTT
CCGCTACCTCCTCGCGCAGGCCACGGGGTCCACCGCCAAATTCCTGCAAT
ACCTTACGTACGGGTACATGATCGATAACATCGCACTACTCATCACCGGT
ACTCTGCACGAGCGTGACACTCGCGAGCTCCTCGAGCGATGCCACCCCCT
AGGCTGGTTCGAGACGCTGCCTGTACTTTGCGTCGCCACGAACATCGAAG
AACTCTACAACTCTGTGCTGGTTGAGACGCCGCTGGCCGGTTACTTCAAG
AGCAGCCTGAGCCATCAGGATCTGGATGAACTGAACATTGAGATCGTGCG
CAACACGCTTTACAAGAATTACTTGGAGGACTTTCACCAGTTTGTCACCA
CACACCCTGATTTCAAGGGCACTCCCACGCAAGAGGTCATGTCCGAGATC
CTGCAGTTTGAGGCAGACCGCCGTGCAATTAACATCACGCTGAACTCGTT
TGGAACGGAGCTGTCGAAGCAGGAGCGGAAGAAGCTGTACCCGGAGTTTG
GCAAGCTGTATCCAGAGGGATCGCTGATGCTTTCGCGCGCCGATGATATT
GAATCCGTGGCTCTGGCTGTAAGCATCTCTGCGGACTACAAGGCATTCTT
TGATGCTGTTGGCCTTACTCAGGGCGGTGGTGGCCTAGGTGGCATGGGTG
GTTCGGATGGAAAGAGTCTGGAGGACCTGTTCTACCAAAAGGAGATGGAG
CTGAGCAAGGTTGTCTTCACACGGCAATTCACCCCGGCCGTGGTGTACGC
GTGGATGAGACTGAAGGAGCAGGAAATCCGCAACGTTACATGGATTGCTG
AGTGCATTGCCCAAAATCAGAAGGAGAGAATTGGAAACTTCATTTCCGTT
TTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA6KJC3_005833Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005833-T1KJC3_005833-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005833-T1.utr5p1KJC3_005833-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005833-T1.exon1KJC3_005833-T1.exon1Aspergillus niger KJC3exon
KJC3_005833-T1.exon2KJC3_005833-T1.exon2Aspergillus niger KJC3exon
KJC3_005833-T1.exon3KJC3_005833-T1.exon3Aspergillus niger KJC3exon
KJC3_005833-T1.exon4KJC3_005833-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005833-T1.cdsKJC3_005833-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005833-T1.utr3p1KJC3_005833-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092638RC
DBxrefInterPro:IPR036079
DBxrefInterPro:IPR016727
DBxrefInterPro:IPR035067
DBxrefInterPro:IPR002843
DBxrefPFAM:PF01992
ProductH( )-transporting V0 sector ATPase subunit d
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3879571..3881125 +
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