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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3904660..3906808+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005845-T1 ID=KJC3_005845-T1|Name=KJC3_005845-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2149bp|location=Sequence derived from alignment at ch4:3904660..3906808+ (Aspergillus niger KJC3)
GTCAATTGCCCCAGTTCGGGAGTCTTTCTTACAGTGAAAAGAGCTGCACA
CAGAAGGCATGATCTAAGCCTCCTCATATCAAGCGCATCGGTTGAGAGGA
AGTATGATCCGCGCGGGGTCCCTGAAGCAAGTTGACTTCTATCTCCGATC
CTTCCCCGCGATTTCCATAGAGCAGCGACCCTTGCGACTGTCTCAACAGC
TCATTCGGACGACGACATGACAAGTACATCTTCCGCCTCTGCTTTCGATG
ACAAGCGACCCATATCCATGAGCTTCCGTCACAGTCAATCCGGGAGACCT
GATTCACCCCATACGCCCCAACATCACCTCCGATCCAACAATTCTTCCTT
TGCGAGCACCTCGTCCGCAAGCACATCGTTTCGCGGAGAAGAAGATGCTA
TCATATTTGAATTTGGATCAAGATGGCTTCGGGCTGGATTCGAGGGCGAA
AGCACGCCAATGTGCGTGGTTGGATGCGGCCCAGAGGAGTCAAGGAGGGT
TGGCGATTACAGAGGGTGGCTGAGAAGCAACAATGAGACGGACACATCAC
GCTCGCGACCAGTCAAAGCAGACGAATGGGCTGGTGCATACGAACTCTGG
AAGATGGATGTACGCGATATGAATATGGCGCTCATTGACGACAAGATTGA
GCGCATGTTTCGCGAGACATACAATAAATACCTATTGACGGATGCGGGAA
CATCACGACTGGTTCTGGTTCTTCCATCTATCATGCCGCATCCTCTCCTA
TCATCACTTTTGTCAACACTGTTTAGCCGTTGGCGGTTTCCAAGCATCAC
ACTCTTGACTAGTGCTACTATGGCCGTGGTCGCAGCTGGGCTGCGTTCAG
GTCTGGTAGTGGACATCGGATGGGCAGAAACCATTGTAACCGGTATCTAC
GAATACAGAGAGATGGAGATTAAGCGCAGCACGAGGGCTATGAAGTCCCT
ACTGCAGGAGACTGGCCGGTTCCTTACACGACTCTCCGATGACAGTAGGG
CCGCACAATCGGCGGACGAAATCTCCGTTCATTATGAGCTATGCGAAGAA
ATTGCTAGTCGATTCCTGTGGTGTAAACCTAAGGCGGCTTCCCAAGGCTC
CGCGGCGACACAGCAGCAACAGCCAGTCGAGGGACAAGGGGAGGATGCTG
GAGCGGCTGACCGACACACTACTTCGCAATCAGATGCAACGGTGTCGCTT
CCCTCCCCATCAGGTTCAGGATCAACCTACATCGACCTTCCTTTCTCCAA
GCTTGCGGAACCGGTGGAAAAGGTTCTTTTTGCGGAGGGCTTAGCCGACT
GCGAGTTGGACGACGAGGAAAAACCGTTGCCGTTGTTGGTGTATAATGCC
CTTCTTAGCCTGCCTCCCGATGTCCGCGGCACGTGCATGTCACGCATTGT
TTTCATTGGCGGAGGCTCTAATATCCCTGGTGTCCGACAGCGCATTCTCC
AGGACGTGGCGTCCCTGGTCGAAAAGTATGGCTGGTCACCTGTCCGCGGC
AAGGTTATTGAGCAGCAACGCCAAAAGCTTGAAAGCCTAAGACTCTCTCA
ACAAGCCATACCCACTGTCACAAAGCAGGAGAGCGCTAATGAGGCCCCTG
ATGAGCGATCAACCCCAGATGCACAAGCAGAAGAAGAGATCGACCCCATC
GAGCAAAAGATCCGTCGTAACAACAAAGACAAGGATGCCCACCCGCCGGT
CCAAGGTGTCTTGCGGGAGGTCGAATCCCTTGGACCCTGGGCAGGAGCCA
GCCTCCTCACAAGTCTCAAGATCCGGGGCTTAGTCGAGATTGAGCGGGAA
AAATACCTCCAACATGGCCTTGCAGGAGCTAGTCGGGATCTGGAGCATGG
GCATGCTCCTGATAGGCGCTCGGGGCTACGCACGGGAGGCGACCGGTCTA
GTTGGACTGTGGCTGGCTGGGGTTGAATCTAGTGTCGTTCCCCCGCATGG
CCACGCTAATTATGCGTCCTGGTCAGACAAGCATTGTTGGAGATTCGAAA
AATTTTCCATCGTTTTGTCTTCCCCCCTCACGGAGTAGTGCTGACCTCAC
CACCCTGAACTCACTCTGATTTTGTTCTCACTGAGATTGTTGAAGCAGTT
AGCAGTAGATACGATACCCGTTAGAGTCTTACAGCAAATTTATTAGCAA back to topCoding sequence (CDS) from alignment at ch4:3904660..3906808+ >KJC3_005845-T1 ID=KJC3_005845-T1|Name=KJC3_005845-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch4:3904660..3906808+ (Aspergillus niger KJC3)
ATGACAAGTACATCTTCCGCCTCTGCTTTCGATGACAAGCGACCCATATC
CATGAGCTTCCGTCACAGTCAATCCGGGAGACCTGATTCACCCCATACGC
CCCAACATCACCTCCGATCCAACAATTCTTCCTTTGCGAGCACCTCGTCC
GCAAGCACATCGTTTCGCGGAGAAGAAGATGCTATCATATTTGAATTTGG
ATCAAGATGGCTTCGGGCTGGATTCGAGGGCGAAAGCACGCCAATGTGCG
TGGTTGGATGCGGCCCAGAGGAGTCAAGGAGGGTTGGCGATTACAGAGGG
TGGCTGAGAAGCAACAATGAGACGGACACATCACGCTCGCGACCAGTCAA
AGCAGACGAATGGGCTGGTGCATACGAACTCTGGAAGATGGATGTACGCG
ATATGAATATGGCGCTCATTGACGACAAGATTGAGCGCATGTTTCGCGAG
ACATACAATAAATACCTATTGACGGATGCGGGAACATCACGACTGGTTCT
GGTTCTTCCATCTATCATGCCGCATCCTCTCCTATCATCACTTTTGTCAA
CACTGTTTAGCCGTTGGCGGTTTCCAAGCATCACACTCTTGACTAGTGCT
ACTATGGCCGTGGTCGCAGCTGGGCTGCGTTCAGGTCTGGTAGTGGACAT
CGGATGGGCAGAAACCATTGTAACCGGTATCTACGAATACAGAGAGATGG
AGATTAAGCGCAGCACGAGGGCTATGAAGTCCCTACTGCAGGAGACTGGC
CGGTTCCTTACACGACTCTCCGATGACAGTAGGGCCGCACAATCGGCGGA
CGAAATCTCCGTTCATTATGAGCTATGCGAAGAAATTGCTAGTCGATTCC
TGTGGTGTAAACCTAAGGCGGCTTCCCAAGGCTCCGCGGCGACACAGCAG
CAACAGCCAGTCGAGGGACAAGGGGAGGATGCTGGAGCGGCTGACCGACA
CACTACTTCGCAATCAGATGCAACGGTGTCGCTTCCCTCCCCATCAGGTT
CAGGATCAACCTACATCGACCTTCCTTTCTCCAAGCTTGCGGAACCGGTG
GAAAAGGTTCTTTTTGCGGAGGGCTTAGCCGACTGCGAGTTGGACGACGA
GGAAAAACCGTTGCCGTTGTTGGTGTATAATGCCCTTCTTAGCCTGCCTC
CCGATGTCCGCGGCACGTGCATGTCACGCATTGTTTTCATTGGCGGAGGC
TCTAATATCCCTGGTGTCCGACAGCGCATTCTCCAGGACGTGGCGTCCCT
GGTCGAAAAGTATGGCTGGTCACCTGTCCGCGGCAAGGTTATTGAGCAGC
AACGCCAAAAGCTTGAAAGCCTAAGACTCTCTCAACAAGCCATACCCACT
GTCACAAAGCAGGAGAGCGCTAATGAGGCCCCTGATGAGCGATCAACCCC
AGATGCACAAGCAGAAGAAGAGATCGACCCCATCGAGCAAAAGATCCGTC
GTAACAACAAAGACAAGGATGCCCACCCGCCGGTCCAAGGTGTCTTGCGG
GAGGTCGAATCCCTTGGACCCTGGGCAGGAGCCAGCCTCCTCACAAGTCT
CAAGATCCGGGGCTTAGTCGAGATTGAGCGGGAAAAATACCTCCAACATG
GCCTTGCAGGAGCTAGTCGGGATCTGGAGCATGGGCATGCTCCTGATAGG
CGCTCGGGGCTACGCACGGGAGGCGACCGGTCTAGTTGGACTGTGGCTGG
CTGGGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005845-T1.utr5p1 | KJC3_005845-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005845-T1.utr3p1 | KJC3_005845-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR004000 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3904660..3906808 + |
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