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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3909145..3913505+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005847-T1 ID=KJC3_005847-T1|Name=KJC3_005847-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4361bp|location=Sequence derived from alignment at ch4:3909145..3913505+ (Aspergillus niger KJC3)
GTCCAGACTGCTGCTGTGGTGCCTCTGCCATCCCGTATCTCCCGGAAGGG
AACAACCATCCTGCCGGATAACCTAAGCATCTCCCCTGCCGGTCGCTGGG
CCTGCCTGATCGGGAGACTTGTTTATGTTATGCGGCGATTTTATCGAATT
CCTTACGAATTGAAAATCTGTTTCTGGTCGCTGAGATCTTGTCTGGGTAG
TCTACTCCTAGACGCGACGACCAATCTTACCTTTTAAGTTCGAATATGAA
AGTGTTTGATTAGCAGAGCCGATTGAAGTGCTTGGTTCCGGGGTCGTCCC
TATGAGACGCGACGGGGGGTCACAAATCACCCCTCACATGCGTCGCATCG
TTGTTTCCCTATCGATATGTCCTCCCGCAGCTCCAGTTCTTCTCCGGACA
TTCTTGGGCCACCTGGCGACGCCGAATATTTGATTTCCTCCCCGTTTGTC
CCCTTCTCCGGTCGCCAAAGCTTCATGTCGCCCGCCAACTTTCGCCTCCT
GCAAAGCCCGCGGACGGCGAAGGGAAAAAGGCGGTCGCGCGTGAGTCTGA
GCCCTTCGAAAAATGCCCACTCCATCAAGTTCAACGACGTTGTGCTACCT
GCTTCCCCGACGACGAAACTGAACGGCCAGCGCGGTGGAATGTCTCCCGA
TAAGGGTCCGTCCGACGGGAATGTCAGTCCGTGGAGGATTCGGGTGACGC
TCGAGGCAACACAAGATGAAGAGACGAACCAAGGCAGTCCTTCGCGAAAA
CGTTTGAAGCCGTCAACGACAACGATGAAAGTACCCCTCAAAGACGATAC
AGAACAAACCCCCCGAAGACGCAGAGGTCGCCCAAGGAAGTCAGACATTT
GGGTGCAGGATGCGACACCACGCTCAGGTAGTCCAGGACATACACCGGGC
CCGGGGCATACTCCAGGTCCTGGGGGAACAGGTCAGAAGAGAAAACGAGG
CCGTCCGAGGAAAAGCGCACCAGCGCTCGATGTGGTAGAATTAAGCGAAC
AGCAGGTGGAGAATCATGAGAATGAACAAGAGGCTCCGATAGAGCCCGAG
CAGAGATGGAGTCCTTTGAATCTTGCAGCAGAACCGGGATCTGACGATGA
AATTGGGGGGGATCAAGGACTCGAATTCAATGACGACTTTGGTTATGACG
ACCGCATGGAACTACCTGATTCCGCTGCCCGCGATGGGAATGCTCCCCGA
GTGACATTTGAGCAAACCTTTGAGACTCCGAATGTTGACCATGTCGACCA
AGGGCTTACGGAAAACGACGAGTATAATCTACACTCAACACCATCCAAAA
TGCCATCCCCGACCCGCGATACCCCGATAATCTCGCCAGCGAACACATTG
CATGCCGGCCGCACCCCGAGACCATCGCGCCTTTATCCTACACCAACCTC
ATCTTCTGCAGCAGAAGAAGATAAGATAGAGCAGGTTCAGAAAACGAGTG
CAGCTTATGATAGGGATCACCATGAAAGCGGGGCGCAGCCCAGCGCAGAT
CCGACGGAGGAACACAGGGAGTTTGACTCTATAATGGAAAGTGAAGGATT
CAGCATGGTCTCGCTGGATACATTGCCATCAGCTAAACAACATGAGATCA
AGAGTGCGAGCCACTCCCAAGCCGCCAAGAGTTCTCTGAAGCCTTTCCTA
GAACGGGAATCAAATGGCGTCTTGAAGCGAAGAGCCTCGACGATTCTGAA
TCAACAAGAGGATGATTCTGCCCGGCAGGCACGGTCGGACTCGAAGCAGC
GAAAGCAGTCACCAGCCCAGCTTTTCACCCAGTCAAATCAGGACAATGCC
CACTTAGACCGTCCATCATCCCAAGATAGGCTTGAACCTTCGAGAGGCAT
GCCCGGCTTAACGTCGGTGGCATCTGAGCCGACTTCTACTAGACAAAAGC
GGGGGCCGTTGACCAGGTTCGTCAGAATAGTTCGTGCAGGGTTAGCTCTC
GAAGGGCCTCTACGAAACTCAGAAGAGGGGCAAACTTCGTACCAGTCAAA
CTCCAGAAGGCCCAGCATCTCGGATGATCGAAATTCCATGCTGGACACTC
CTAGGAAAAGGCTCGAACACGTTTTTGGTGACTTAACCCCACAAGTACAA
CAAGAGCTGCAGGCAGGCTTGGCATTAGGACAGGAACTCGCGAAGAGGCG
GCTCGAGAGAGAAATGGAACAACGCAGACAAACGGAGTTGGAGGAGGTGA
CTGCAGAAAACACCGCTCGGGAAACCAGGGAATGGAGTGGATCCAGTTCA
CCACATCAAACACTGCCTGAGACCACAGACTATGGCACACCGGGCACGTT
TATGAAACGGCGGATGGAAGAGTGGCAACGGGAAAGGGAAGCTATCAGTC
GAGAGATCCAAATGGCAAATTCTAGCCAGGTCATCGTCATCGACAGTGAC
GATAATGATCAGTCGAATTTGCAAAATGGCACGTATGAAGGCGGCGACGA
GATTGATCACGCGGCGGAACCCGTTCAAGACGATCAAGATGACGACGCCC
ACGTAGAGGCAGACCGTTTAGACGAGGAAGACGAGGATGATGGCTACGAA
GATATTTGGCAGCAAGAAGCTCGCAGTCAAGGCAACCAGTCAGATCACTC
TTCACTGCTCGAGGATGACCAGGATGGTGAGCACCTTAGGCAGGATGAGT
CTAGCCCATGGAAGAGTGGCTGGACTCCTGCTCGAAATCAGAATGGCAAG
ATCTTATCACCGGCTCATTGGACAAACGAGCGGGAGACTGTGCCATTCTT
GGGCCGATCGAGGGTCAAACAATTAAAGGAGCAAGAAGTTGACTTGACAG
CTCTGTACCGTGCCCAGGACACACCAAAGCGTCGCCACTACTACTATGGG
AAAAGCAGTCCGCCGAGTAGTGCAATACGAGGCTCTGTAGGCCGCTCGCC
AGCTTCTGTGGTACAAGAGGGGCTCTATGAGCATGATTTCAACCAGGATC
AACAGTCAGAGGACTACGTGGAGTCCAGCCCTCGCCGGGATTCGGAAGAT
GAAACATTCCAGATCGATCCGACAACCAGATTGGAGATGGCTAGACAACG
CCAAGAGCCTGGGATGGAAGCCAACGAGATTGGGGGAATGCCAGATGCCG
TTACATCCGAGAGACAAACTGCTCCAGATTTGGGAGACATCACGCCGGAA
CGTCCACGGCATGCAAGCCCTGGCAGTCAAGCATCATCCTGGTTCCAGAA
AATCACTAATTTCACGCCTGGTTGGCTCAGAGCACCGAAGTCTGAACAGC
AAGGGCGGGGTTCTGAGCATCTCTCGGGCGACGGAGATGAGGGACCGCCC
GCCGTTGAGTCAACACATGATAGATATGATAATGATGATTACGGCGATGA
TGAAGTCAACTGGGGAGACTTAGGGGAAACCCCACGACCTATTCGATTTG
GCGATCCAGAAGATGAGAAACAGAGTTTCGCTAGTTCCGAGTCTTTCCAG
GTTGTCGACGATGCTCACGCTTCACTGGACGAGAAGGGTGACAGAGAAGA
AATAGTGGAGGGGCAGGCTTCACGAGAGCAATCACCCTCTTCCTTCTCCC
TGTACTTCTCCGATGATCACTATCGCTTGCTGCATCGCCTCTATCGCTCG
GCAAAACTGTATCCTGAGCGCTTCCCTTACCATCCGGCGCCTGGTCGCTC
CGATATGATTGGCGACTGGATCTGGACCTCGGATGGAGTCTACGGAGTAC
CAGTCACAGAGCTTCAATTTGGCATTGTTGATAGATTTGCACAGCAGCTA
TCCCAAGCCGATTCGAAGGCCGGCGGAACGGGTCAGATTCCTTGGACGGA
AGCTGACGTTCACAGAAGATTGATCAGTATCATAATCGGGGAACAAGTCA
GACAAGACCAGAGGGAGAGGAGGCTCCACGAGGATCGACTGAGGGAAGAG
TATTCGCGAAGCAGGGACGCAGCGTACGAGGCGTGGCGCATATGACTTCT
CAAACCTGCACGTCGCTTGGCTCCTGCCGCCTGGACTCGGCACATTACAT
CTATTTTTTGAGTACAGACTTTGTTGGCACACAAAGTTAGCACACGTTGT
AACGACTTATATTCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTCATTGAAAGGATACGTTGTTTCGGGTCTTCACGGGTGGCGA
ACCGGCGGATTCGATCTTGGTGGTCATTGGGTGGCAGGATCACTTTACGT
TTTGGCCTTACTATGTTCTTGTACAGCATCTATTTTGTCTACGTACTATT
CCCCCTCTGTTTCATTTGTCTTGGACTCTCCACACCCGATTGGATCTTCA
TGAGTCAGCTGCCAAACAAGTTTTATTCTGTAGTCGATTACAGTATATGT
TGGAATGGAAC back to topCoding sequence (CDS) from alignment at ch4:3909145..3913505+ >KJC3_005847-T1 ID=KJC3_005847-T1|Name=KJC3_005847-T1|organism=Aspergillus niger KJC3|type=CDS|length=3579bp|location=Sequence derived from alignment at ch4:3909145..3913505+ (Aspergillus niger KJC3)
ATGTCCTCCCGCAGCTCCAGTTCTTCTCCGGACATTCTTGGGCCACCTGG
CGACGCCGAATATTTGATTTCCTCCCCGTTTGTCCCCTTCTCCGGTCGCC
AAAGCTTCATGTCGCCCGCCAACTTTCGCCTCCTGCAAAGCCCGCGGACG
GCGAAGGGAAAAAGGCGGTCGCGCGTGAGTCTGAGCCCTTCGAAAAATGC
CCACTCCATCAAGTTCAACGACGTTGTGCTACCTGCTTCCCCGACGACGA
AACTGAACGGCCAGCGCGGTGGAATGTCTCCCGATAAGGGTCCGTCCGAC
GGGAATGTCAGTCCGTGGAGGATTCGGGTGACGCTCGAGGCAACACAAGA
TGAAGAGACGAACCAAGGCAGTCCTTCGCGAAAACGTTTGAAGCCGTCAA
CGACAACGATGAAAGTACCCCTCAAAGACGATACAGAACAAACCCCCCGA
AGACGCAGAGGTCGCCCAAGGAAGTCAGACATTTGGGTGCAGGATGCGAC
ACCACGCTCAGGTAGTCCAGGACATACACCGGGCCCGGGGCATACTCCAG
GTCCTGGGGGAACAGGTCAGAAGAGAAAACGAGGCCGTCCGAGGAAAAGC
GCACCAGCGCTCGATGTGGTAGAATTAAGCGAACAGCAGGTGGAGAATCA
TGAGAATGAACAAGAGGCTCCGATAGAGCCCGAGCAGAGATGGAGTCCTT
TGAATCTTGCAGCAGAACCGGGATCTGACGATGAAATTGGGGGGGATCAA
GGACTCGAATTCAATGACGACTTTGGTTATGACGACCGCATGGAACTACC
TGATTCCGCTGCCCGCGATGGGAATGCTCCCCGAGTGACATTTGAGCAAA
CCTTTGAGACTCCGAATGTTGACCATGTCGACCAAGGGCTTACGGAAAAC
GACGAGTATAATCTACACTCAACACCATCCAAAATGCCATCCCCGACCCG
CGATACCCCGATAATCTCGCCAGCGAACACATTGCATGCCGGCCGCACCC
CGAGACCATCGCGCCTTTATCCTACACCAACCTCATCTTCTGCAGCAGAA
GAAGATAAGATAGAGCAGGTTCAGAAAACGAGTGCAGCTTATGATAGGGA
TCACCATGAAAGCGGGGCGCAGCCCAGCGCAGATCCGACGGAGGAACACA
GGGAGTTTGACTCTATAATGGAAAGTGAAGGATTCAGCATGGTCTCGCTG
GATACATTGCCATCAGCTAAACAACATGAGATCAAGAGTGCGAGCCACTC
CCAAGCCGCCAAGAGTTCTCTGAAGCCTTTCCTAGAACGGGAATCAAATG
GCGTCTTGAAGCGAAGAGCCTCGACGATTCTGAATCAACAAGAGGATGAT
TCTGCCCGGCAGGCACGGTCGGACTCGAAGCAGCGAAAGCAGTCACCAGC
CCAGCTTTTCACCCAGTCAAATCAGGACAATGCCCACTTAGACCGTCCAT
CATCCCAAGATAGGCTTGAACCTTCGAGAGGCATGCCCGGCTTAACGTCG
GTGGCATCTGAGCCGACTTCTACTAGACAAAAGCGGGGGCCGTTGACCAG
GTTCGTCAGAATAGTTCGTGCAGGGTTAGCTCTCGAAGGGCCTCTACGAA
ACTCAGAAGAGGGGCAAACTTCGTACCAGTCAAACTCCAGAAGGCCCAGC
ATCTCGGATGATCGAAATTCCATGCTGGACACTCCTAGGAAAAGGCTCGA
ACACGTTTTTGGTGACTTAACCCCACAAGTACAACAAGAGCTGCAGGCAG
GCTTGGCATTAGGACAGGAACTCGCGAAGAGGCGGCTCGAGAGAGAAATG
GAACAACGCAGACAAACGGAGTTGGAGGAGGTGACTGCAGAAAACACCGC
TCGGGAAACCAGGGAATGGAGTGGATCCAGTTCACCACATCAAACACTGC
CTGAGACCACAGACTATGGCACACCGGGCACGTTTATGAAACGGCGGATG
GAAGAGTGGCAACGGGAAAGGGAAGCTATCAGTCGAGAGATCCAAATGGC
AAATTCTAGCCAGGTCATCGTCATCGACAGTGACGATAATGATCAGTCGA
ATTTGCAAAATGGCACGTATGAAGGCGGCGACGAGATTGATCACGCGGCG
GAACCCGTTCAAGACGATCAAGATGACGACGCCCACGTAGAGGCAGACCG
TTTAGACGAGGAAGACGAGGATGATGGCTACGAAGATATTTGGCAGCAAG
AAGCTCGCAGTCAAGGCAACCAGTCAGATCACTCTTCACTGCTCGAGGAT
GACCAGGATGGTGAGCACCTTAGGCAGGATGAGTCTAGCCCATGGAAGAG
TGGCTGGACTCCTGCTCGAAATCAGAATGGCAAGATCTTATCACCGGCTC
ATTGGACAAACGAGCGGGAGACTGTGCCATTCTTGGGCCGATCGAGGGTC
AAACAATTAAAGGAGCAAGAAGTTGACTTGACAGCTCTGTACCGTGCCCA
GGACACACCAAAGCGTCGCCACTACTACTATGGGAAAAGCAGTCCGCCGA
GTAGTGCAATACGAGGCTCTGTAGGCCGCTCGCCAGCTTCTGTGGTACAA
GAGGGGCTCTATGAGCATGATTTCAACCAGGATCAACAGTCAGAGGACTA
CGTGGAGTCCAGCCCTCGCCGGGATTCGGAAGATGAAACATTCCAGATCG
ATCCGACAACCAGATTGGAGATGGCTAGACAACGCCAAGAGCCTGGGATG
GAAGCCAACGAGATTGGGGGAATGCCAGATGCCGTTACATCCGAGAGACA
AACTGCTCCAGATTTGGGAGACATCACGCCGGAACGTCCACGGCATGCAA
GCCCTGGCAGTCAAGCATCATCCTGGTTCCAGAAAATCACTAATTTCACG
CCTGGTTGGCTCAGAGCACCGAAGTCTGAACAGCAAGGGCGGGGTTCTGA
GCATCTCTCGGGCGACGGAGATGAGGGACCGCCCGCCGTTGAGTCAACAC
ATGATAGATATGATAATGATGATTACGGCGATGATGAAGTCAACTGGGGA
GACTTAGGGGAAACCCCACGACCTATTCGATTTGGCGATCCAGAAGATGA
GAAACAGAGTTTCGCTAGTTCCGAGTCTTTCCAGGTTGTCGACGATGCTC
ACGCTTCACTGGACGAGAAGGGTGACAGAGAAGAAATAGTGGAGGGGCAG
GCTTCACGAGAGCAATCACCCTCTTCCTTCTCCCTGTACTTCTCCGATGA
TCACTATCGCTTGCTGCATCGCCTCTATCGCTCGGCAAAACTGTATCCTG
AGCGCTTCCCTTACCATCCGGCGCCTGGTCGCTCCGATATGATTGGCGAC
TGGATCTGGACCTCGGATGGAGTCTACGGAGTACCAGTCACAGAGCTTCA
ATTTGGCATTGTTGATAGATTTGCACAGCAGCTATCCCAAGCCGATTCGA
AGGCCGGCGGAACGGGTCAGATTCCTTGGACGGAAGCTGACGTTCACAGA
AGATTGATCAGTATCATAATCGGGGAACAAGTCAGACAAGACCAGAGGGA
GAGGAGGCTCCACGAGGATCGACTGAGGGAAGAGTATTCGCGAAGCAGGG
ACGCAGCGTACGAGGCGTGGCGCATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005847-T1.utr5p1 | KJC3_005847-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005847-T1.utr3p1 | KJC3_005847-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017956 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3909145..3913505 + |
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