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KJC3_005848-T1, KJC3_005848-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005848-T1
Unique NameKJC3_005848-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3914276..3916101+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005848-T1 ID=KJC3_005848-T1|Name=KJC3_005848-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1826bp|location=Sequence derived from alignment at ch4:3914276..3916101+ (Aspergillus niger KJC3)
CTGTGTGTGTGCCTGAGTTGCAACTTCAAACGGTCTGTCTGTCTGTCTGT
CTGTCAGCCTGGCAAAGGTGCAACTGAACGGTGAAGTCCATTATACTGTC
CAGTGCCCTTGGAACGATAAGCAAGCACAGATCGGCAGGAAGATCAGGCA
AGAAGAAATTTCCATTTGTATATGTACGAAAAAGAAAAAGGAAAAAAATG
GGGGTCAGCAATCCAGTCAAGTATGTCTTGCGCCTGTCCCTGTTCACCAA
CAAGCGAACCGAGCAACAACAACAACATCGACAACACCACTCCTCCTCCC
CCATCTCCCCCATCTCCCCCTCCACTACCTGGAAAGGGAAAGAAATCGAC
TCTGACCCGCCCATTGAAGTTCGCTGGGGCGCTGTACAGTACCCAGATGA
CTATGCAGCATTGACCGATGTCCATGCCCACATGGCGGTGAGCGCAATTG
ACTCGGATCTGGGCAGCAGCAGCAGCAGTAGCCGCAGCAGAAGCAGCGGT
AGCAGTAGCCGGACGGGGCTGGTGCGCGTTGTGAGCTGGGCCAGTCTTGC
TGGGGATAGATGTCGGTGGACGATGGAACAAGAACGGAGATTAGCGATTG
CGAGAAGTGAACTGGCTCGATGTCAGAAAGCTTGGAGTTCGGAGCAGGAG
TTGTGGTTAGCTCAAGTATGTTTTATCCCCTATCCTTCTCATCAATGTTT
CAACAACAACTCTCTTGGATTTCTCTTTCTTGTGTGCTTCCATCCTGCTT
GCTTCCCCGTCGTGAGACAAACAAACCTATACCCCTGTCTGTCTTGACTT
TCACCGAACAACCCCTCCCCCCCTCCCCTCCACACCACCATCTCACACAA
TGACGGGACATGACATACAGTAGGGCCCTACTGTACCTGCATATGACTAA
CCCTTCCCACCTACGTAAACCAGATCGAAAAGTTGCACGAGGAGAAAGAA
GCCCACGAACATTTCATTCACCACCGAGCAAAACAACAGGACGAAGAGCA
GCAGCATTTTCGCAAATCCTGGATTCGACGAAAGTCTTACGAAGAGCAAC
AGCAGCAGCTCGTCCCTACTACGCAAAGGACTAATAGTCGATTGCGGCGG
ATACGGCGCATAGGATCATAGTATCTATGTCCGGGTTGTCGGAAGTATAG
TGTCTTTTTAGGCAAAAAGTAAGTAGATAGTTTATGGAGCTCTCGACGTC
ATGATTGGCAACGACGTGAAACGATAACCATTTCTGACAGGTGCTTTTTT
GTTGATCGATCCTTTTCTCACTAGTCAGGGTTAGGTGTTTAACATCACTT
TTACGACTTCGCTTGTGTGTGTGTCCATCTAATTGCGATCAGCTCTGCAA
GGCAACCCATTTGGAAAATGAGGAAGGCAGGAAAGATAATGAAGAAAAGA
CAGAAGGATGGAAGGAAAAGGGGGTGGACGAGAATCATGTCCATGATGAC
CTCCTGCATGAATGGCTTGAACTAGTTCTGAGGCTTGGTTTTGTGGGTTT
TATTTTCGTCCCCCCTTATGCCATCCACTTCCTCTAGTCTTCGCTGTCGA
TCCAGCCGGCTGCGCATCTTGATCTTCCCGTTGTCTCCGGAATGGATTTT
CTGTTGAGCAGGGAATTGAGCAAGGAAGGAGGATGAAAAAGGGAAAAGAA
AAAAAGAAACAATGGAATCAAAACTTTGCACAAGCATGGCTTTTTTTCCC
GGACCTAGGGGCGATCATGCTGCATGGCATGATTGGATGCGTATCGATCT
TTAGAGTAGGGGAGTAGGGCATGGTGTTAGTAGTACTTACTAGTAGTACT
GTATGCCTTTTTCTTTGAATTACGAG
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Coding sequence (CDS) from alignment at ch4:3914276..3916101+

>KJC3_005848-T1 ID=KJC3_005848-T1|Name=KJC3_005848-T1|organism=Aspergillus niger KJC3|type=CDS|length=1332bp|location=Sequence derived from alignment at ch4:3914276..3916101+ (Aspergillus niger KJC3)
ATGGGGGTCAGCAATCCAGTCAAGTATGTCTTGCGCCTGTCCCTGTTCAC
CAACAAGCGAACCGAGCAACAACAACAACATCGACAACACCACTCCTCCT
CCCCCATCTCCCCCATCTCCCCCTCCACTACCTGGAAAGGGAAAGAAATC
GACTCTGACCCGCCCATTGAAGTTCGCTGGGGCGCTGTACAGTACCCAGA
TGACTATGCAGCATTGACCGATGTCCATGCCCACATGGCGGTGAGCGCAA
TTGACTCGGATCTGGGCAGCAGCAGCAGCAGTAGCCGCAGCAGAAGCAGC
GGTAGCAGTAGCCGGACGGGGCTGGTGCGCGTTGTGAGCTGGGCCAGTCT
TGCTGGGGATAGATGTCGGTGGACGATGGAACAAGAACGGAGATTAGCGA
TTGCGAGAAGTGAACTGGCTCGATGTCAGAAAGCTTGGAGTTCGGAGCAG
GAGTTGTGGTTAGCTCAAATCGAAAAGTTGCACGAGGAGAAAGAAGCCCA
CGAACATTTCATTCACCACCGAGCAAAACAACAGGACGAAGAGCAGCAGC
ATTTTCGCAAATCCTGGATTCGACGAAAGTCTTACGAAGAGCAACAGCAG
CAGCTCGTCCCTACTACGCAAAGGACTAATAGTCGATTGCGGCGGATACG
GCGCATAGGATCATAGATGGGGGTCAGCAATCCAGTCAAGTATGTCTTGC
GCCTGTCCCTGTTCACCAACAAGCGAACCGAGCAACAACAACAACATCGA
CAACACCACTCCTCCTCCCCCATCTCCCCCATCTCCCCCTCCACTACCTG
GAAAGGGAAAGAAATCGACTCTGACCCGCCCATTGAAGTTCGCTGGGGCG
CTGTACAGTACCCAGATGACTATGCAGCATTGACCGATGTCCATGCCCAC
ATGGCGGTGAGCGCAATTGACTCGGATCTGGGCAGCAGCAGCAGCAGTAG
CCGCAGCAGAAGCAGCGGTAGCAGTAGCCGGACGGGGCTGGTGCGCGTTG
TGAGCTGGGCCAGTCTTGCTGGGGATAGATGTCGGTGGACGATGGAACAA
GAACGGAGATTAGCGATTGCGAGAAGTGAACTGGCTCGATGTCAGAAAGC
TTGGAGTTCGGAGCAGGAGTTGTGGTTAGCTCAAATCGAAAAGTTGCACG
AGGAGAAAGAAGCCCACGAACATTTCATTCACCACCGAGCAAAACAACAG
GACGAAGAGCAGCAGCATTTTCGCAAATCCTGGATTCGACGAAAGTCTTA
CGAAGAGCAACAGCAGCAGCTCGTCCCTACTACGCAAAGGACTAATAGTC
GATTGCGGCGGATACGGCGCATAGGATCATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005848KJC3_005848Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005848-T1.utr5p1KJC3_005848-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005848-T1.exon1KJC3_005848-T1.exon1Aspergillus niger KJC3exon
KJC3_005848-T1.exon2KJC3_005848-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005848-T1.cdsKJC3_005848-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005848-T1.utr3p1KJC3_005848-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005848-T1KJC3_005848-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3914276..3916101 +
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