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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3935873..3937468+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005854-T1 ID=KJC3_005854-T1|Name=KJC3_005854-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1596bp|location=Sequence derived from alignment at ch4:3935873..3937468+ (Aspergillus niger KJC3)
ATGGCGTACTCTCCTGGCCCGACATCCCCGGTCCACGGGAACGGGGCGCC
CATGATGGCAAATAACTTACAATCTAGAGGCCGCTCCACCAGTCCTCCGA
CCAGCGTGCCGCTGTCGAAACGGGACAAACGACGCAGCGCGCTCCAGGAG
CGCCTTCATGACCTCACGGCCTCGTTCAGCCAAAACAGAGATACCCAGTT
TCGTCAGCAATTGCATGCCCTCCAATGCGACATGACCCTCATTAACAATG
CCGATCCTTACGAGCCTGGCCCTCTCCCCGATTCGGCGGAGGATATCGCC
CGCCTTATCGAGAATACCGTCGGTGGGGGCAAGTTCGCTAAGGAGATGGC
GAGTTTGGCCGGCATGTGGTATTCGCGCTTCGTGCAGGAGGTAAATCAGG
TTAAAGCGGAGAAGGATGCGGATTTGGCTATGTTGGTGGTAAGTTCATTT
CAGCGTTGGTTTTGGTTTTCCTGGCTTGGTCGTGGGCTAATGTTTATTTT
CCTTCTCCAGCATCGTCACAATCACAATCTCGAACGGTTCAAGCAGGAGT
ATGCGTTTCGGGTACACTTCGCAGAGGAAGAATACAATAACTTGTCGCTT
ACCCTTCGGGAGCGTCTTGTTCAAACGATTTCAGGCAAGAGGGCTCGCTT
GATGCGAGAAAAAGAGCAGTTGGATCTGGCTGATACCAATGCCCTTCTCC
TGCACCCCAATCAGTTTAGCATCACCAACCCGGCCAGTCCGGGTGGGATC
CACGGAAACCGCAAGACCCGTCACACCCGCCACCGCGTCGATTTGGACGA
GCTCGGCAATGGGATTATGTCGGAGCATTTCAATAAGCGCAAGAGAAAGG
CGGCCGATGAGGATGTGGGCTCGCCTGTGCGCGAGACCAACCCCGCCGAG
CGCGCCAAGGCCCAGGCGGCGGCGCAGCAGCAAGCGCCGTCCTACTCCAT
CAATTCTCTCTTCACGGAGAGGGAGCTTGGTGCTCATGCCAATGCTGCAC
ACATTGCGACGGTCCACTTCTTCTCGACGTCCAAGCGTGCGGACCAGCCG
TCCGGAGCGGCTACAAACGGTAACAACACCGATGCCGACGACGGTTCGGG
GGTGGACGGGACGGGTGCCGAGGACAATGGCACTCCTGCGGCCGATATGG
CTCGCACAGCCAGTCAGAACTTCCACGCCACGCGATCCACGAGGACGCAT
GGTAACCATGCTTTGAACGCGCTGGCGGAGCTGTCAGACAAGCCCGCGGT
GCGCCCTAGCCTCCCGTACAATATCCTGGCCAACTACCACGCGCGTTCAA
GCAACAGCGGCGCGCCTCCTCTGCCTCCTTTGATGAACGAGGAAGTCGAT
GACGACTGGGCGCGCATCGACCGGTTGCACAACAAGCCTGCAGGATTTGT
GGATCGCACGCTCGTTCAGCTCTTAGTTGAGACCATCCCCTCAGACGTGG
ACGGAGTGCCGCAGGACCCTAATCGGTTTAACATGCTACATCCCGACTTC
CCCACCGAAATGGGCATGCATCTATATCCTTTACGGAAGGATAATGGCGA
AGTAACAAGCAACGAGCGTTCAACAAAGAAAACCAAATCGGGCTAG back to topCoding sequence (CDS) from alignment at ch4:3935873..3937468+ >KJC3_005854-T1 ID=KJC3_005854-T1|Name=KJC3_005854-T1|organism=Aspergillus niger KJC3|type=CDS|length=3048bp|location=Sequence derived from alignment at ch4:3935873..3937468+ (Aspergillus niger KJC3)
ATGGCGTACTCTCCTGGCCCGACATCCCCGGTCCACGGGAACGGGGCGCC
CATGATGGCAAATAACTTACAATCTAGAGGCCGCTCCACCAGTCCTCCGA
CCAGCGTGCCGCTGTCGAAACGGGACAAACGACGCAGCGCGCTCCAGGAG
CGCCTTCATGACCTCACGGCCTCGTTCAGCCAAAACAGAGATACCCAGTT
TCGTCAGCAATTGCATGCCCTCCAATGCGACATGACCCTCATTAACAATG
CCGATCCTTACGAGCCTGGCCCTCTCCCCGATTCGGCGGAGGATATCGCC
CGCCTTATCGAGAATACCGTCGGTGGGGGCAAGTTCGCTAAGGAGATGGC
GAGTTTGGCCGGCATGTGGTATTCGCGCTTCGTGCAGGAGGTAAATCAGG
TTAAAGCGGAGAAGGATGCGGATTTGGCTATGTTGGTGCATCGTCACAAT
CACAATCTCGAACGGTTCAAGCAGGAGTATGCGTTTCGGGTACACTTCGC
AGAGGAAGAATACAATAACTTGTCGCTTACCCTTCGGGAGCGTCTTGTTC
AAACGATTTCAGGCAAGAGGGCTCGCTTGATGCGAGAAAAAGAGCAGTTG
GATCTGGCTGATACCAATGCCCTTCTCCTGCACCCCAATCAGTTTAGCAT
CACCAACCCGGCCAGTCCGGGTGGGATCCACGGAAACCGCAAGACCCGTC
ACACCCGCCACCGCGTCGATTTGGACGAGCTCGGCAATGGGATTATGTCG
GAGCATTTCAATAAGCGCAAGAGAAAGGCGGCCGATGAGGATGTGGGCTC
GCCTGTGCGCGAGACCAACCCCGCCGAGCGCGCCAAGGCCCAGGCGGCGG
CGCAGCAGCAAGCGCCGTCCTACTCCATCAATTCTCTCTTCACGGAGAGG
GAGCTTGGTGCTCATGCCAATGCTGCACACATTGCGACGGTCCACTTCTT
CTCGACGTCCAAGCGTGCGGACCAGCCGTCCGGAGCGGCTACAAACGGTA
ACAACACCGATGCCGACGACGGTTCGGGGGTGGACGGGACGGGTGCCGAG
GACAATGGCACTCCTGCGGCCGATATGGCTCGCACAGCCAGTCAGAACTT
CCACGCCACGCGATCCACGAGGACGCATGGTAACCATGCTTTGAACGCGC
TGGCGGAGCTGTCAGACAAGCCCGCGGTGCGCCCTAGCCTCCCGTACAAT
ATCCTGGCCAACTACCACGCGCGTTCAAGCAACAGCGGCGCGCCTCCTCT
GCCTCCTTTGATGAACGAGGAAGTCGATGACGACTGGGCGCGCATCGACC
GGTTGCACAACAAGCCTGCAGGATTTGTGGATCGCACGCTCGTTCAGCTC
TTAGTTGAGACCATCCCCTCAGACGTGGACGGAGTGCCGCAGGACCCTAA
TCGGTTTAACATGCTACATCCCGACTTCCCCACCGAAATGGGCATGCATC
TATATCCTTTACGGAAGGATAATGGCGAAGTAACAAGCAACGAGCGTTCA
ACAAAGAAAACCAAATCGGGCTAGATGGCGTACTCTCCTGGCCCGACATC
CCCGGTCCACGGGAACGGGGCGCCCATGATGGCAAATAACTTACAATCTA
GAGGCCGCTCCACCAGTCCTCCGACCAGCGTGCCGCTGTCGAAACGGGAC
AAACGACGCAGCGCGCTCCAGGAGCGCCTTCATGACCTCACGGCCTCGTT
CAGCCAAAACAGAGATACCCAGTTTCGTCAGCAATTGCATGCCCTCCAAT
GCGACATGACCCTCATTAACAATGCCGATCCTTACGAGCCTGGCCCTCTC
CCCGATTCGGCGGAGGATATCGCCCGCCTTATCGAGAATACCGTCGGTGG
GGGCAAGTTCGCTAAGGAGATGGCGAGTTTGGCCGGCATGTGGTATTCGC
GCTTCGTGCAGGAGGTAAATCAGGTTAAAGCGGAGAAGGATGCGGATTTG
GCTATGTTGGTGCATCGTCACAATCACAATCTCGAACGGTTCAAGCAGGA
GTATGCGTTTCGGGTACACTTCGCAGAGGAAGAATACAATAACTTGTCGC
TTACCCTTCGGGAGCGTCTTGTTCAAACGATTTCAGGCAAGAGGGCTCGC
TTGATGCGAGAAAAAGAGCAGTTGGATCTGGCTGATACCAATGCCCTTCT
CCTGCACCCCAATCAGTTTAGCATCACCAACCCGGCCAGTCCGGGTGGGA
TCCACGGAAACCGCAAGACCCGTCACACCCGCCACCGCGTCGATTTGGAC
GAGCTCGGCAATGGGATTATGTCGGAGCATTTCAATAAGCGCAAGAGAAA
GGCGGCCGATGAGGATGTGGGCTCGCCTGTGCGCGAGACCAACCCCGCCG
AGCGCGCCAAGGCCCAGGCGGCGGCGCAGCAGCAAGCGCCGTCCTACTCC
ATCAATTCTCTCTTCACGGAGAGGGAGCTTGGTGCTCATGCCAATGCTGC
ACACATTGCGACGGTCCACTTCTTCTCGACGTCCAAGCGTGCGGACCAGC
CGTCCGGAGCGGCTACAAACGGTAACAACACCGATGCCGACGACGGTTCG
GGGGTGGACGGGACGGGTGCCGAGGACAATGGCACTCCTGCGGCCGATAT
GGCTCGCACAGCCAGTCAGAACTTCCACGCCACGCGATCCACGAGGACGC
ATGGTAACCATGCTTTGAACGCGCTGGCGGAGCTGTCAGACAAGCCCGCG
GTGCGCCCTAGCCTCCCGTACAATATCCTGGCCAACTACCACGCGCGTTC
AAGCAACAGCGGCGCGCCTCCTCTGCCTCCTTTGATGAACGAGGAAGTCG
ATGACGACTGGGCGCGCATCGACCGGTTGCACAACAAGCCTGCAGGATTT
GTGGATCGCACGCTCGTTCAGCTCTTAGTTGAGACCATCCCCTCAGACGT
GGACGGAGTGCCGCAGGACCCTAATCGGTTTAACATGCTACATCCCGACT
TCCCCACCGAAATGGGCATGCATCTATATCCTTTACGGAAGGATAATGGC
GAAGTAACAAGCAACGAGCGTTCAACAAAGAAAACCAAATCGGGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013907 |
| DBxref | PFAM:PF08598 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3935873..3937468 + |
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