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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3944171..3947299- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005856-T1 ID=KJC3_005856-T1|Name=KJC3_005856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3129bp|location=Sequence derived from alignment at ch4:3944171..3947299- (Aspergillus niger KJC3)
CCACCCCTCATCTTCTTCTGCCACTCTCGGTCGCAGACTCTTCTCACAAC
ACCTTCTATTCACATTCAAAAGACCCCTTATTCTCCTCTTTACTATCCAG
ATATCGTCAAGGGTTCCTCGCCAGGATGGCTTTCGCTGAGCTGTAGATTC
CTCGCTGGGGGGCACGGCTGCCTTTTCCATGCTCCCCAGTCCAGCAGCTC
CGAGTAATCTCCAATTGACTTGACGATTATCTGTTCCTCTTTCGACGCAA
CAATAGGCAAGCGTCGGAATTGCCCCTCAGTACACTTACAGGAGAAGCAC
TTTTGACGTCCCTTTCTGGACGGTGAGGTGCTTTTGCGGTCTACGAAAAG
TCTTTGCTATCGTCCCTTTTTCTTGCCCTCCCCTCCCCTCTATCCGATCA
CCACCCCCTACCGATATACCACCACTCATCCTGATCTCTCTCACGCTGTC
TATAACATCCATCACGACATCCTTTCCTTCCTCTACGCCATTACGAAATT
ACGTTCCGAAAAACTCCTACCTTACGATATCGGTCCCTGAACCTGTCTTC
TCAAGTCGCTGACGCAATCGATTCATTGCGGCGGGTTGTACGGGTAGCAA
ACTTTGTCGAACCAACAAGTGCTTCTTAACCTTTGTCGGTCCCGATAGGA
CTGAGAGACCTCTCCCAAGGAAGAAATATCACAATACCTATTGTTGACGA
TATAATGGCGCCAACAACACACTCCCCGAAGCGGTCACCCCAGGGTGTCG
CAAAGGCTACCCATCACAACCCCGCGGGTCGTTCCCCGAGAACGTCCAAT
AAAGCTGTCTCCCTCGGTTCTCTGAACGCTGATCGGAAACGAAGAGCGGC
CTCCGTCTCGAGCGTGTCATCCGTCTCATCCATTGGCGAACTCAGCGATG
ATGCAAATGATTCCGAGGATGATGATGCAGATGACGAAGAAGAACAGCCC
GCTGTTCGTGGCCCGTCTTATGGTCGCCGTGACAGGGCCCATAAGACGGG
TGTCAAACAAAAGAAGACAAAAAAGATGAAGTTCTCCGACGATGACGGCT
ACGATGGCCAACGGAGTAGCGATGATAACAATGAATCCGATGAAAGCTCC
GATGATGTCTATGCCGCTGTGGACTATATCAGCGATGGCTCAGATGATGA
GGAACAGGATGTAGAGAAGTTGGAAGAGTTGTTGATTGTGGAATCTGAGA
ATGAAAACCCTGTTGGTGGTATCTTGGCTGCTCCCGGCGCTGATGCTTGG
GCCGGTCCCAATGTTTTCGACGATCATATGATCCTGTCGGCTGCGTCCTT
CTTTGATGAAGAACAGCTTTATACTGCCATGGAAGCCTTTGGGGAGACTG
ACATGGCTAGCGAGACTGCTATTGAGACCCCGGTGGCGCGCCGGGTGCAT
TTCGAGGAAGACTCAGACTCCTCGTCTGATAGTGATTCCCATACTGAAGA
TGAGATCCCAAGTGATTTCCTCCAGCAGGATAGTCTCGATCCCCAGTTGC
GTCGCATGATCGACAATGATAATGAAAATTTATCCCGCCGCCGGCGTCAA
TCTGAGGAGATATATGCCGAGTCAGACTATGGGCATTCTAATATTTATCA
CGTGGAATCCGATGCCATCTCCGACGGTTCGGAGTCAAGCGGCTATGAAA
GTATGCATGCAGCTGGTCAACCCCGCACATTTCATTTACTGACACGTTTG
AAGCCGATGATGGCGAGACTACAGATGAAGATCTCCCTCCTCCTGCCACC
ATCACTCATCCCAGATCTATCCTGCGTCGTGATTCTTCGGCCTCGTTGGC
GCCCACAGGCGATGAGAAGAGCGAAACCACTTCTCGTCGGCGAGGACCTA
TCATGGGGACATTTGTCGCCGATCCTCATAAACCTGTTGCACTTGTCGAC
TGCACTGGCAAGCACCTTGTGATCATTCCTGCCTATGCTTCTTCTCGCCA
TGATTGGCTTGAATCTGCCACGAACAGTGTCTGCAATACTGCTCACAACA
GCCCGCGGGCTACTACCATGCATCTTATTGACGAGAGCGACACGGACGCC
CTCGCGTCGCCCAACCATGCTGATCTGAGCCCTATGCTAGCATCGAGTGC
CAATCTTATGATGACTGCTCTTGGTAATGATATTGCTCCGGGTGGTCAGG
TAATGGGCCCGCCCGAGGCGTTCTATCCGTCCCGTGACTTTGCTATCGAT
AGCTCTTTCGAGGACGATGATGAAGATGATCCGGAGTCGGCTTTGAATGT
CGAAGACTTCATTGACTTCGGTGATGGGTCATCTGATGACGAAATGGACA
AGGCGTTTGACGAAGAAGCGCTGATGTCGCCAATGACTGCCCGACCCCTA
CAGGCCGGCACGGGTACGCCGACCCCTAATCGCGGTGCTGACTCCCAGCA
GGCCAGCAGTGCGGAGCGATTCCTAAATCACCTGGACCGTGGCATCGTTA
CCGCATTCCGCCGGAATCACAACCGCTACCAAGCCCTGTTGCGTCTCCCA
CAACATCGGGAATTTATGCCGGCCAATTCGCCTTCTCGCCCCGCTAGCGT
CTTCAGGCATGCACGCCATGCAGACCAACGCACCCCCACGCGCAAGCGCA
AAGCTAGTGGGTACAACGGCGGGGAGGCGGTCCGACGAAAGCTGATGGAC
GCCCACCGCCACACCCAGCTTCCTTTCTAAATACTACCTGACACTGCGCG
ATACCCTGATATCTCTGATTTGAGGCGAACATAGCGTGCCTGGATTTCCG
CTAATTCCGAGGACATATTGAACATTTGTACATGGATTTAGAGTCTGTGT
TTCTAGCATAGACGATGATGCGTTTGTTACATCGGGAACGTGGCTTGGTT
GATCCAGCCTCGTTCTCTACCAAACGCGGTGTTCTGCATGGGTTCTCTCT
CCGACAGAATTAGGTCTTCTTTCTCTTGGTCGGAAAGATGGGGGATATCT
CATGGCCAAAAGTTCGAGTTTGATGACATTTGATTTCTGGAGTTGATCGA
AGGATATACCTTGTGTTACGAAGACCTGTTGCTTTTCTTTGTCCTACCTT
GATTTTCTCCGTTTGATGACATGTATGCACTGCTACGGCGTCTTAAGCAC
ACGGAAATGCAAATATGAAAATATTCTAA back to topCoding sequence (CDS) from alignment at ch4:3944171..3947299- >KJC3_005856-T1 ID=KJC3_005856-T1|Name=KJC3_005856-T1|organism=Aspergillus niger KJC3|type=CDS|length=3846bp|location=Sequence derived from alignment at ch4:3944171..3947299- (Aspergillus niger KJC3)
CCGATGATGGCGAGACTACAGATGAAGATCTCCCTCCTCCTGCCACCATC
ACTCATCCCAGATCTATCCTGCGTCGTGATTCTTCGGCCTCGTTGGCGCC
CACAGGCGATGAGAAGAGCGAAACCACTTCTCGTCGGCGAGGACCTATCA
TGGGGACATTTGTCGCCGATCCTCATAAACCTGTTGCACTTGTCGACTGC
ACTGGCAAGCACCTTGTGATCATTCCTGCCTATGCTTCTTCTCGCCATGA
TTGGCTTGAATCTGCCACGAACAGTGTCTGCAATACTGCTCACAACAGCC
CGCGGGCTACTACCATGCATCTTATTGACGAGAGCGACACGGACGCCCTC
GCGTCGCCCAACCATGCTGATCTGAGCCCTATGCTAGCATCGAGTGCCAA
TCTTATGATGACTGCTCTTGGTAATGATATTGCTCCGGGTGGTCAGGTAA
TGGGCCCGCCCGAGGCGTTCTATCCGTCCCGTGACTTTGCTATCGATAGC
TCTTTCGAGGACGATGATGAAGATGATCCGGAGTCGGCTTTGAATGTCGA
AGACTTCATTGACTTCGGTGATGGGTCATCTGATGACGAAATGGACAAGG
CGTTTGACGAAGAAGCGCTGATGTCGCCAATGACTGCCCGACCCCTACAG
GCCGGCACGGGTACGCCGACCCCTAATCGCGGTGCTGACTCCCAGCAGGC
CAGCAGTGCGGAGCGATTCCTAAATCACCTGGACCGTGGCATCGTTACCG
CATTCCGCCGGAATCACAACCGCTACCAAGCCCTGTTGCGTCTCCCACAA
CATCGGGAATTTATGCCGGCCAATTCGCCTTCTCGCCCCGCTAGCGTCTT
CAGGCATGCACGCCATGCAGACCAACGCACCCCCACGCGCAAGCGCAAAG
CTAGTGGGTACAACGGCGGGGAGGCGGTCCGACGAAAGCTGATGGACGCC
CACCGCCACACCCAGCTTCCTTTCTAAATGGCGCCAACAACACACTCCCC
GAAGCGGTCACCCCAGGGTGTCGCAAAGGCTACCCATCACAACCCCGCGG
GTCGTTCCCCGAGAACGTCCAATAAAGCTGTCTCCCTCGGTTCTCTGAAC
GCTGATCGGAAACGAAGAGCGGCCTCCGTCTCGAGCGTGTCATCCGTCTC
ATCCATTGGCGAACTCAGCGATGATGCAAATGATTCCGAGGATGATGATG
CAGATGACGAAGAAGAACAGCCCGCTGTTCGTGGCCCGTCTTATGGTCGC
CGTGACAGGGCCCATAAGACGGGTGTCAAACAAAAGAAGACAAAAAAGAT
GAAGTTCTCCGACGATGACGGCTACGATGGCCAACGGAGTAGCGATGATA
ACAATGAATCCGATGAAAGCTCCGATGATGTCTATGCCGCTGTGGACTAT
ATCAGCGATGGCTCAGATGATGAGGAACAGGATGTAGAGAAGTTGGAAGA
GTTGTTGATTGTGGAATCTGAGAATGAAAACCCTGTTGGTGGTATCTTGG
CTGCTCCCGGCGCTGATGCTTGGGCCGGTCCCAATGTTTTCGACGATCAT
ATGATCCTGTCGGCTGCGTCCTTCTTTGATGAAGAACAGCTTTATACTGC
CATGGAAGCCTTTGGGGAGACTGACATGGCTAGCGAGACTGCTATTGAGA
CCCCGGTGGCGCGCCGGGTGCATTTCGAGGAAGACTCAGACTCCTCGTCT
GATAGTGATTCCCATACTGAAGATGAGATCCCAAGTGATTTCCTCCAGCA
GGATAGTCTCGATCCCCAGTTGCGTCGCATGATCGACAATGATAATGAAA
ATTTATCCCGCCGCCGGCGTCAATCTGAGGAGATATATGCCGAGTCAGAC
TATGGGCATTCTAATATTTATCACGTGGAATCCGATGCCATCTCCGACGG
TTCGGAGTCAAGCGGCTATGAAACCGATGATGGCGAGACTACAGATGAAG
ATCTCCCTCCTCCTGCCACCATCACTCATCCCAGATCTATCCTGCGTCGT
GATTCTTCGGCCTCGTTGGCGCCCACAGGCGATGAGAAGAGCGAAACCAC
TTCTCGTCGGCGAGGACCTATCATGGGGACATTTGTCGCCGATCCTCATA
AACCTGTTGCACTTGTCGACTGCACTGGCAAGCACCTTGTGATCATTCCT
GCCTATGCTTCTTCTCGCCATGATTGGCTTGAATCTGCCACGAACAGTGT
CTGCAATACTGCTCACAACAGCCCGCGGGCTACTACCATGCATCTTATTG
ACGAGAGCGACACGGACGCCCTCGCGTCGCCCAACCATGCTGATCTGAGC
CCTATGCTAGCATCGAGTGCCAATCTTATGATGACTGCTCTTGGTAATGA
TATTGCTCCGGGTGGTCAGGTAATGGGCCCGCCCGAGGCGTTCTATCCGT
CCCGTGACTTTGCTATCGATAGCTCTTTCGAGGACGATGATGAAGATGAT
CCGGAGTCGGCTTTGAATGTCGAAGACTTCATTGACTTCGGTGATGGGTC
ATCTGATGACGAAATGGACAAGGCGTTTGACGAAGAAGCGCTGATGTCGC
CAATGACTGCCCGACCCCTACAGGCCGGCACGGGTACGCCGACCCCTAAT
CGCGGTGCTGACTCCCAGCAGGCCAGCAGTGCGGAGCGATTCCTAAATCA
CCTGGACCGTGGCATCGTTACCGCATTCCGCCGGAATCACAACCGCTACC
AAGCCCTGTTGCGTCTCCCACAACATCGGGAATTTATGCCGGCCAATTCG
CCTTCTCGCCCCGCTAGCGTCTTCAGGCATGCACGCCATGCAGACCAACG
CACCCCCACGCGCAAGCGCAAAGCTAGTGGGTACAACGGCGGGGAGGCGG
TCCGACGAAAGCTGATGGACGCCCACCGCCACACCCAGCTTCCTTTCTAA
ATGGCGCCAACAACACACTCCCCGAAGCGGTCACCCCAGGGTGTCGCAAA
GGCTACCCATCACAACCCCGCGGGTCGTTCCCCGAGAACGTCCAATAAAG
CTGTCTCCCTCGGTTCTCTGAACGCTGATCGGAAACGAAGAGCGGCCTCC
GTCTCGAGCGTGTCATCCGTCTCATCCATTGGCGAACTCAGCGATGATGC
AAATGATTCCGAGGATGATGATGCAGATGACGAAGAAGAACAGCCCGCTG
TTCGTGGCCCGTCTTATGGTCGCCGTGACAGGGCCCATAAGACGGGTGTC
AAACAAAAGAAGACAAAAAAGATGAAGTTCTCCGACGATGACGGCTACGA
TGGCCAACGGAGTAGCGATGATAACAATGAATCCGATGAAAGCTCCGATG
ATGTCTATGCCGCTGTGGACTATATCAGCGATGGCTCAGATGATGAGGAA
CAGGATGTAGAGAAGTTGGAAGAGTTGTTGATTGTGGAATCTGAGAATGA
AAACCCTGTTGGTGGTATCTTGGCTGCTCCCGGCGCTGATGCTTGGGCCG
GTCCCAATGTTTTCGACGATCATATGATCCTGTCGGCTGCGTCCTTCTTT
GATGAAGAACAGCTTTATACTGCCATGGAAGCCTTTGGGGAGACTGACAT
GGCTAGCGAGACTGCTATTGAGACCCCGGTGGCGCGCCGGGTGCATTTCG
AGGAAGACTCAGACTCCTCGTCTGATAGTGATTCCCATACTGAAGATGAG
ATCCCAAGTGATTTCCTCCAGCAGGATAGTCTCGATCCCCAGTTGCGTCG
CATGATCGACAATGATAATGAAAATTTATCCCGCCGCCGGCGTCAATCTG
AGGAGATATATGCCGAGTCAGACTATGGGCATTCTAATATTTATCACGTG
GAATCCGATGCCATCTCCGACGGTTCGGAGTCAAGCGGCTATGAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005856-T1.utr3p1 | KJC3_005856-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005856-T1.utr5p1 | KJC3_005856-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:3944171..3947299 - |
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