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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3951258..3953207- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005857-T2 ID=KJC3_005857-T2|Name=KJC3_005857-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1950bp|location=Sequence derived from alignment at ch4:3951258..3953207- (Aspergillus niger KJC3)
GCTGTATTTCAACGGCTCTCGAGCTCAGAGTGGCCATGAATTGCAGAAAG
AGCAGAAATCCCTACGTTGAACAGCTCCCAGCGTGTATATTTCACTTATA
TTGATCGTGCACCGGAACCGGTGGGTCTCGAAACCACTATATATCTGGGG
TATGTTCACCGTCCTTTGTTCAGGCAGCCATATCGCAAAGTGAAGGAACG
GCTCCTTTATCCGCATAGCTTACTTTGTCGAACTTCACTAAATATAAGAG
GACACATATAGGCTTTATAAAGCATTATCGACTACTAAGCGCGGAGCGGG
ATAGTTCGCCATGCAGCAATTCACCCAGTGGAAGAATTGGAGACGCCCGT
CCCAACGTCAACCGCATGAACCCGTCTTGACAACAGAAGATGAGGCATTC
CTACGAGATATTACCTCTGATCCGGCGAATCAAGGGCCGGTCTCGCCTAC
CACCGAACTTGACACCCATCTATCGCCCGTTTCTCCCGTACCCACAGATA
CAATCGATACTACCCAATCAGCAGTGTCACCGGCAGAGGAGTTTGGAAAG
GAGCTAGGGGAGGAAGAACGGAAGGCTAGAGAGAAGACAGAGCGCTCTCA
GAGTGTTTCTCAAGGCTCTAAGGCCGAGGGTTCTACGCAGAAGAAGAGGC
CATGGAGCTGGATTCGGAGGAAGAGTACGGTGGATAAGAAGGTAGCTACG
ATACCGCCGTTGTAGGTGTCTGCACACATAGCTAACTGTTCTTTGATAAC
TAGGGCAGCGAAGGCGCGAGTGAAGCAGCTCCCGCACCAAGTGCTTCAAA
CGATGCACAGCCCTCTGAAGCTAAAGAAGACGATGAAGCGAGACAAGAAG
CAGAAGATATGACGGAAATCCTCGAGCGCCTCAATTTGGCGGCTGAAAAC
AACCGCGTATTCTCGATAAGTGACGAAACACGGGAACTCCTTCGTAAATT
CACGTTGATCTTCAAGGACCTGGTCAACGGTGTTCCGACTGCGTATCATG
ATCTTGAGATGCTCCTCAAGAACGGCAACAAACAACTGCAAAGCACTTAT
TCACAACTCCCGAAGTTCCTCCAGGGTCTGATCGAGAAGCTTCCTGAAAA
ATGGACTGAGACACTGGCCCCTGAAGTTCTCGCTGCTGCCACTGAGAAGG
CCAGTAAAAGTGGCATCAATGTGGACAATGTAGGCAAGGCTGCCGCCGCC
GCCAACAAGATGGGACTTAAGGTTCCCAGCTTGAAAGAACTAGTAGGGAA
GCCGGCAGCGCTTGTAGGGATGTTACGGTCCATCATGGCATTCTTACGGG
CTAGATTCCCCGCAGTGTTGGGTATGAATGTACTCTGGTCAATGGCATTG
TTTAGTACGTTGCGCCCCGATACGACTAGGAGGAAATTGGAGTCACTAAT
GTTCACTAGTTCTTTTGTTTGTTCTCTGGTATTGCCATAAACGGGGCCGC
GAGGTCCGCCTCGAAAATGAGCGTCTTGTCACCGAAGAGGAGATTGGTAG
ATTGAATGACGAGTCACCTGAAGGGAAGATCCGCAATACTGAGACGTTGA
CGACCACGGCGCCCCGTGGAGCTTCTGCGGCGGAAATCCGCCAAGGGGTA
AAGGAGGTACAACAAGCACGAGAGGCCGCCACAACTACGAATGATTCAAA
AGATAAGGAAAATGAACCTAAGGAGGATATTTCTACCAGGCCAAAACGAT
CCAAGTCCATCCTTTCAATCTGGCCTAGGTCGGACCAGAAAGCGACACCG
GCAGGACCGAAAATTGAACCCTACCCAGGTACATGAGCAGGACACTCTTA
TCGCTTTTGGAGAGGCGCAATTGCTTTTTAACTTAACGTCATTTTGATAC
CTTTTGTTCGTCTTTAACCCCAGGATCTACTTTTAATAATTCCATGTCTT
TCGGCCACTTGTCCTCTGAGACTGAATGAAAACATCACTTAGCCTACCTC
back to topCoding sequence (CDS) from alignment at ch4:3951258..3953207- >KJC3_005857-T2 ID=KJC3_005857-T2|Name=KJC3_005857-T2|organism=Aspergillus niger KJC3|type=CDS|length=4077bp|location=Sequence derived from alignment at ch4:3951258..3953207- (Aspergillus niger KJC3)
TTCTTTTGTTTGTTCTCTGGTATTGCCATAAACGGGGCCGCGAGGTCCGC
CTCGAAAATGAGCGTCTTGTCACCGAAGAGGAGATTGGTAGATTGAATGA
CGAGTCACCTGAAGGGAAGATCCGCAATACTGAGACGTTGACGACCACGG
CGCCCCGTGGAGCTTCTGCGGCGGAAATCCGCCAAGGGGTAAAGGAGGTA
CAACAAGCACGAGAGGCCGCCACAACTACGAATGATTCAAAAGATAAGGA
AAATGAACCTAAGGAGGATATTTCTACCAGGCCAAAACGATCCAAGTCCA
TCCTTTCAATCTGGCCTAGGTCGGACCAGAAAGCGACACCGGCAGGACCG
AAAATTGAACCCTACCCAGGTACATGAGGCAGCGAAGGCGCGAGTGAAGC
AGCTCCCGCACCAAGTGCTTCAAACGATGCACAGCCCTCTGAAGCTAAAG
AAGACGATGAAGCGAGACAAGAAGCAGAAGATATGACGGAAATCCTCGAG
CGCCTCAATTTGGCGGCTGAAAACAACCGCGTATTCTCGATAAGTGACGA
AACACGGGAACTCCTTCGTAAATTCACGTTGATCTTCAAGGACCTGGTCA
ACGGTGTTCCGACTGCGTATCATGATCTTGAGATGCTCCTCAAGAACGGC
AACAAACAACTGCAAAGCACTTATTCACAACTCCCGAAGTTCCTCCAGGG
TCTGATCGAGAAGCTTCCTGAAAAATGGACTGAGACACTGGCCCCTGAAG
TTCTCGCTGCTGCCACTGAGAAGGCCAGTAAAAGTGGCATCAATGTGGAC
AATGTAGGCAAGGCTGCCGCCGCCGCCAACAAGATGGGACTTAAGGTTCC
CAGCTTGAAAGAACTAGTAGGGAAGCCGGCAGCGCTTGTAGGGATGTTAC
GGTCCATCATGGCATTCTTACGGGCTAGATTCCCCGCAGTGTTGGGTATG
AATGTACTCTGGTCAATGGCATTGTTTAATGCAGCAATTCACCCAGTGGA
AGAATTGGAGACGCCCGTCCCAACGTCAACCGCATGAACCCGTCTTGACA
ACAGAAGATGAGGCATTCCTACGAGATATTACCTCTGATCCGGCGAATCA
AGGGCCGGTCTCGCCTACCACCGAACTTGACACCCATCTATCGCCCGTTT
CTCCCGTACCCACAGATACAATCGATACTACCCAATCAGCAGTGTCACCG
GCAGAGGAGTTTGGAAAGGAGCTAGGGGAGGAAGAACGGAAGGCTAGAGA
GAAGACAGAGCGCTCTCAGAGTGTTTCTCAAGGCTCTAAGGCCGAGGGTT
CTACGCAGAAGAAGAGGCCATGGAGCTGGATTCGGAGGAAGAGTACGGTG
GATAAGAAGTTCTTTTGTTTGTTCTCTGGTATTGCCATAAACGGGGCCGC
GAGGTCCGCCTCGAAAATGAGCGTCTTGTCACCGAAGAGGAGATTGGTAG
ATTGAATGACGAGTCACCTGAAGGGAAGATCCGCAATACTGAGACGTTGA
CGACCACGGCGCCCCGTGGAGCTTCTGCGGCGGAAATCCGCCAAGGGGTA
AAGGAGGTACAACAAGCACGAGAGGCCGCCACAACTACGAATGATTCAAA
AGATAAGGAAAATGAACCTAAGGAGGATATTTCTACCAGGCCAAAACGAT
CCAAGTCCATCCTTTCAATCTGGCCTAGGTCGGACCAGAAAGCGACACCG
GCAGGACCGAAAATTGAACCCTACCCAGGTACATGAGGCAGCGAAGGCGC
GAGTGAAGCAGCTCCCGCACCAAGTGCTTCAAACGATGCACAGCCCTCTG
AAGCTAAAGAAGACGATGAAGCGAGACAAGAAGCAGAAGATATGACGGAA
ATCCTCGAGCGCCTCAATTTGGCGGCTGAAAACAACCGCGTATTCTCGAT
AAGTGACGAAACACGGGAACTCCTTCGTAAATTCACGTTGATCTTCAAGG
ACCTGGTCAACGGTGTTCCGACTGCGTATCATGATCTTGAGATGCTCCTC
AAGAACGGCAACAAACAACTGCAAAGCACTTATTCACAACTCCCGAAGTT
CCTCCAGGGTCTGATCGAGAAGCTTCCTGAAAAATGGACTGAGACACTGG
CCCCTGAAGTTCTCGCTGCTGCCACTGAGAAGGCCAGTAAAAGTGGCATC
AATGTGGACAATGTAGGCAAGGCTGCCGCCGCCGCCAACAAGATGGGACT
TAAGGTTCCCAGCTTGAAAGAACTAGTAGGGAAGCCGGCAGCGCTTGTAG
GGATGTTACGGTCCATCATGGCATTCTTACGGGCTAGATTCCCCGCAGTG
TTGGGTATGAATGTACTCTGGTCAATGGCATTGTTTAATGCAGCAATTCA
CCCAGTGGAAGAATTGGAGACGCCCGTCCCAACGTCAACCGCATGAACCC
GTCTTGACAACAGAAGATGAGGCATTCCTACGAGATATTACCTCTGATCC
GGCGAATCAAGGGCCGGTCTCGCCTACCACCGAACTTGACACCCATCTAT
CGCCCGTTTCTCCCGTACCCACAGATACAATCGATACTACCCAATCAGCA
GTGTCACCGGCAGAGGAGTTTGGAAAGGAGCTAGGGGAGGAAGAACGGAA
GGCTAGAGAGAAGACAGAGCGCTCTCAGAGTGTTTCTCAAGGCTCTAAGG
CCGAGGGTTCTACGCAGAAGAAGAGGCCATGGAGCTGGATTCGGAGGAAG
AGTACGGTGGATAAGAAGTTCTTTTGTTTGTTCTCTGGTATTGCCATAAA
CGGGGCCGCGAGGTCCGCCTCGAAAATGAGCGTCTTGTCACCGAAGAGGA
GATTGGTAGATTGAATGACGAGTCACCTGAAGGGAAGATCCGCAATACTG
AGACGTTGACGACCACGGCGCCCCGTGGAGCTTCTGCGGCGGAAATCCGC
CAAGGGGTAAAGGAGGTACAACAAGCACGAGAGGCCGCCACAACTACGAA
TGATTCAAAAGATAAGGAAAATGAACCTAAGGAGGATATTTCTACCAGGC
CAAAACGATCCAAGTCCATCCTTTCAATCTGGCCTAGGTCGGACCAGAAA
GCGACACCGGCAGGACCGAAAATTGAACCCTACCCAGGTACATGAGGCAG
CGAAGGCGCGAGTGAAGCAGCTCCCGCACCAAGTGCTTCAAACGATGCAC
AGCCCTCTGAAGCTAAAGAAGACGATGAAGCGAGACAAGAAGCAGAAGAT
ATGACGGAAATCCTCGAGCGCCTCAATTTGGCGGCTGAAAACAACCGCGT
ATTCTCGATAAGTGACGAAACACGGGAACTCCTTCGTAAATTCACGTTGA
TCTTCAAGGACCTGGTCAACGGTGTTCCGACTGCGTATCATGATCTTGAG
ATGCTCCTCAAGAACGGCAACAAACAACTGCAAAGCACTTATTCACAACT
CCCGAAGTTCCTCCAGGGTCTGATCGAGAAGCTTCCTGAAAAATGGACTG
AGACACTGGCCCCTGAAGTTCTCGCTGCTGCCACTGAGAAGGCCAGTAAA
AGTGGCATCAATGTGGACAATGTAGGCAAGGCTGCCGCCGCCGCCAACAA
GATGGGACTTAAGGTTCCCAGCTTGAAAGAACTAGTAGGGAAGCCGGCAG
CGCTTGTAGGGATGTTACGGTCCATCATGGCATTCTTACGGGCTAGATTC
CCCGCAGTGTTGGGTATGAATGTACTCTGGTCAATGGCATTGTTTAATGC
AGCAATTCACCCAGTGGAAGAATTGGAGACGCCCGTCCCAACGTCAACCG
CATGAACCCGTCTTGACAACAGAAGATGAGGCATTCCTACGAGATATTAC
CTCTGATCCGGCGAATCAAGGGCCGGTCTCGCCTACCACCGAACTTGACA
CCCATCTATCGCCCGTTTCTCCCGTACCCACAGATACAATCGATACTACC
CAATCAGCAGTGTCACCGGCAGAGGAGTTTGGAAAGGAGCTAGGGGAGGA
AGAACGGAAGGCTAGAGAGAAGACAGAGCGCTCTCAGAGTGTTTCTCAAG
GCTCTAAGGCCGAGGGTTCTACGCAGAAGAAGAGGCCATGGAGCTGGATT
CGGAGGAAGAGTACGGTGGATAAGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005857-T2.utr3p1 | KJC3_005857-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005857-T2.utr5p1 | KJC3_005857-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3951258..3953207 - |
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