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KJC3_005866-T1, KJC3_005866-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005866-T1
Unique NameKJC3_005866-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3972493..3974431+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005866-T1 ID=KJC3_005866-T1|Name=KJC3_005866-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1939bp|location=Sequence derived from alignment at ch4:3972493..3974431+ (Aspergillus niger KJC3)
GTCCATGAAAGCGTCTGAGTTAGACTACGTACGTAGCTCTACGAATGCCT
AATGTGCTAAGATGCAAAATTCGATTTCCTTCGACCAGAATGCGTGGACA
ACGCAGCCAATGTCATCCCTTTTAGGGATCTTAGCACCGCAGCCCGGCTT
CTCCATCTCCGATGCCCGTGAAACCCAGCGTGAATCTCGGCCCGTCTTAA
CTCCGACTCCCCGACAAGAACGTTGCGGATGTGCTCGAGGCATCAGACAA
CTGTAGGTGGCGGTGTATGATTGTTCTTCTGTTGGCATGGACCCCAATGG
ACCATCAAGTACCCCAGGGCTGCCTTCGCCTGGCGATCTGATTGCTCAGC
AACGGAAAGATGCCATCCAAGCAGCGGGGCAGCCTACAGGCGATGGAGGG
CTTCTCTCCCAGCTAACCAACAATCCTTTTTTCACCGCAGTAAGTTCCTC
AGGGTGTTACAGCTATGTCTGCTGCAAATTCCAATCGCTGACAGGAAGTT
GCATTCATAGGGATTTGGTCTTGCCGGTTTGGGGGCAGGAGTCGGTCTCG
CACAGAAAGGCTTCCGCCATGGCGCCGCTCTCCTCCGGCGGCGCATGCTT
GTCGACGTCGAAATCAGCATCAAAGACGACTCCTACCCGTGGTTCCTTCA
CTGGATGACACTATACCAACAATCGCAGCTTAATTCGGCCCGCTCCGCTG
CCAGCAGGTCTGGTTTCATGGAGTCCATACTACAGAGGCTGACCCCCGGG
ATGCGCCACCTCTCAATCCAAACACAGAAAGTCGAGCACAGCAATGGAGC
GATACATACACATTTCGCGCTGGTGCCTGGACCCGGAAGGCATGTTTTGC
GCTACAAGAATGCGTTCATCTTCGTCAACCGGATGCGAGAATCCAAGTCC
CAGGACCTACACACGGGCCGGCCGTGGGAGACCATCACTCTGACCACGCT
TTATTCGCATCGACATGTCTTCGAAGACCTCTTCACGGAAGCGCACGCGT
ATGCGGCCAAATCTCACGAAGGCAAGACATCCATTTATAACAGTTGGGGT
ACCGAATGGAAGCTTTTCGGACAGCCGCGGCGAAAGCGTCCATTGGATTC
GGTGGTTCTCGACGAAGGAGTCAAGGAGCGAATTGTGGAGGATGTGCAGG
ACTTTGTGGGCAGTGGCAAATGGTATCACGACCGGGGTATTCCCTACCGC
CGTGGTTATCTCCTCTACGGGCCTCCGGGAACGGGTAAGAGTTCGTTCAT
CCAAGCCTTGGCGGGTGAATTGGACTATGACATTGCCATCTTGAACCTCA
GCGAGCGGGGACTGACCGATGATCGGCTGAATCATCTTCTAACGATTGTT
CCGAACCGAACCCTAGTCTTACTCGAAGATGTAGACGCCGCGTTCTCGAA
TCGCCGGACTCAAACGGACGAGGACGGGTATCGCGGAGCCAATGTCACAT
TTTCGGGTCTTCTGAATGCTCTCGATGGCGTTGCAAGCGCCGAGGAACGC
ATTATCTTCCTCACCACCAACCACGTTGAACGGCTTGACGAGGCGCTAGT
CCGACCGGGTCGCGTGGACATGACGGTGCGTCTGGGCGAAGTGACTCGCT
ATCAAGTCGGCTGCCTCTGGGACCGGTTCTACGGAGAGCTTGACCCGAGT
GGTGCCAACCGACAGGTCTTCCTCGATCGGCTACAGGAATTAGGGCTGAT
CGAGGACGAGAACGGCTTCAAGGCTGATCGGACGAAGAGCACCAGCGCTG
CTGCTCTGCAGGGCTTGTTCTTGTACAACAAGGGCAATATGGAAGGAGCG
ATTGCTATGGCGGAGGGTCTGACGTTCCGAGTTCATGATGAGGCTATGTA
GTATGAGCGATTAGACTGTATGATAGACTGTGCCATGTATATTAGTTGCG
TGCCAGTATGTGTATAATATGGCCAATGAAAATAACAGG
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Coding sequence (CDS) from alignment at ch4:3972493..3974431+

>KJC3_005866-T1 ID=KJC3_005866-T1|Name=KJC3_005866-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch4:3972493..3974431+ (Aspergillus niger KJC3)
ATGGACCCCAATGGACCATCAAGTACCCCAGGGCTGCCTTCGCCTGGCGA
TCTGATTGCTCAGCAACGGAAAGATGCCATCCAAGCAGCGGGGCAGCCTA
CAGGCGATGGAGGGCTTCTCTCCCAGCTAACCAACAATCCTTTTTTCACC
GCAGGATTTGGTCTTGCCGGTTTGGGGGCAGGAGTCGGTCTCGCACAGAA
AGGCTTCCGCCATGGCGCCGCTCTCCTCCGGCGGCGCATGCTTGTCGACG
TCGAAATCAGCATCAAAGACGACTCCTACCCGTGGTTCCTTCACTGGATG
ACACTATACCAACAATCGCAGCTTAATTCGGCCCGCTCCGCTGCCAGCAG
GTCTGGTTTCATGGAGTCCATACTACAGAGGCTGACCCCCGGGATGCGCC
ACCTCTCAATCCAAACACAGAAAGTCGAGCACAGCAATGGAGCGATACAT
ACACATTTCGCGCTGGTGCCTGGACCCGGAAGGCATGTTTTGCGCTACAA
GAATGCGTTCATCTTCGTCAACCGGATGCGAGAATCCAAGTCCCAGGACC
TACACACGGGCCGGCCGTGGGAGACCATCACTCTGACCACGCTTTATTCG
CATCGACATGTCTTCGAAGACCTCTTCACGGAAGCGCACGCGTATGCGGC
CAAATCTCACGAAGGCAAGACATCCATTTATAACAGTTGGGGTACCGAAT
GGAAGCTTTTCGGACAGCCGCGGCGAAAGCGTCCATTGGATTCGGTGGTT
CTCGACGAAGGAGTCAAGGAGCGAATTGTGGAGGATGTGCAGGACTTTGT
GGGCAGTGGCAAATGGTATCACGACCGGGGTATTCCCTACCGCCGTGGTT
ATCTCCTCTACGGGCCTCCGGGAACGGGTAAGAGTTCGTTCATCCAAGCC
TTGGCGGGTGAATTGGACTATGACATTGCCATCTTGAACCTCAGCGAGCG
GGGACTGACCGATGATCGGCTGAATCATCTTCTAACGATTGTTCCGAACC
GAACCCTAGTCTTACTCGAAGATGTAGACGCCGCGTTCTCGAATCGCCGG
ACTCAAACGGACGAGGACGGGTATCGCGGAGCCAATGTCACATTTTCGGG
TCTTCTGAATGCTCTCGATGGCGTTGCAAGCGCCGAGGAACGCATTATCT
TCCTCACCACCAACCACGTTGAACGGCTTGACGAGGCGCTAGTCCGACCG
GGTCGCGTGGACATGACGGTGCGTCTGGGCGAAGTGACTCGCTATCAAGT
CGGCTGCCTCTGGGACCGGTTCTACGGAGAGCTTGACCCGAGTGGTGCCA
ACCGACAGGTCTTCCTCGATCGGCTACAGGAATTAGGGCTGATCGAGGAC
GAGAACGGCTTCAAGGCTGATCGGACGAAGAGCACCAGCGCTGCTGCTCT
GCAGGGCTTGTTCTTGTACAACAAGGGCAATATGGAAGGAGCGATTGCTA
TGGCGGAGGGTCTGACGTTCCGAGTTCATGATGAGGCTATGTAGATGGAC
CCCAATGGACCATCAAGTACCCCAGGGCTGCCTTCGCCTGGCGATCTGAT
TGCTCAGCAACGGAAAGATGCCATCCAAGCAGCGGGGCAGCCTACAGGCG
ATGGAGGGCTTCTCTCCCAGCTAACCAACAATCCTTTTTTCACCGCAGGA
TTTGGTCTTGCCGGTTTGGGGGCAGGAGTCGGTCTCGCACAGAAAGGCTT
CCGCCATGGCGCCGCTCTCCTCCGGCGGCGCATGCTTGTCGACGTCGAAA
TCAGCATCAAAGACGACTCCTACCCGTGGTTCCTTCACTGGATGACACTA
TACCAACAATCGCAGCTTAATTCGGCCCGCTCCGCTGCCAGCAGGTCTGG
TTTCATGGAGTCCATACTACAGAGGCTGACCCCCGGGATGCGCCACCTCT
CAATCCAAACACAGAAAGTCGAGCACAGCAATGGAGCGATACATACACAT
TTCGCGCTGGTGCCTGGACCCGGAAGGCATGTTTTGCGCTACAAGAATGC
GTTCATCTTCGTCAACCGGATGCGAGAATCCAAGTCCCAGGACCTACACA
CGGGCCGGCCGTGGGAGACCATCACTCTGACCACGCTTTATTCGCATCGA
CATGTCTTCGAAGACCTCTTCACGGAAGCGCACGCGTATGCGGCCAAATC
TCACGAAGGCAAGACATCCATTTATAACAGTTGGGGTACCGAATGGAAGC
TTTTCGGACAGCCGCGGCGAAAGCGTCCATTGGATTCGGTGGTTCTCGAC
GAAGGAGTCAAGGAGCGAATTGTGGAGGATGTGCAGGACTTTGTGGGCAG
TGGCAAATGGTATCACGACCGGGGTATTCCCTACCGCCGTGGTTATCTCC
TCTACGGGCCTCCGGGAACGGGTAAGAGTTCGTTCATCCAAGCCTTGGCG
GGTGAATTGGACTATGACATTGCCATCTTGAACCTCAGCGAGCGGGGACT
GACCGATGATCGGCTGAATCATCTTCTAACGATTGTTCCGAACCGAACCC
TAGTCTTACTCGAAGATGTAGACGCCGCGTTCTCGAATCGCCGGACTCAA
ACGGACGAGGACGGGTATCGCGGAGCCAATGTCACATTTTCGGGTCTTCT
GAATGCTCTCGATGGCGTTGCAAGCGCCGAGGAACGCATTATCTTCCTCA
CCACCAACCACGTTGAACGGCTTGACGAGGCGCTAGTCCGACCGGGTCGC
GTGGACATGACGGTGCGTCTGGGCGAAGTGACTCGCTATCAAGTCGGCTG
CCTCTGGGACCGGTTCTACGGAGAGCTTGACCCGAGTGGTGCCAACCGAC
AGGTCTTCCTCGATCGGCTACAGGAATTAGGGCTGATCGAGGACGAGAAC
GGCTTCAAGGCTGATCGGACGAAGAGCACCAGCGCTGCTGCTCTGCAGGG
CTTGTTCTTGTACAACAAGGGCAATATGGAAGGAGCGATTGCTATGGCGG
AGGGTCTGACGTTCCGAGTTCATGATGAGGCTATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0034551mitochondrial respiratory chain complex III assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005866KJC3_005866Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005866-T1.utr5p1KJC3_005866-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005866-T1.exon1KJC3_005866-T1.exon1Aspergillus niger KJC3exon
KJC3_005866-T1.exon2KJC3_005866-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005866-T1.cdsKJC3_005866-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005866-T1.utr3p1KJC3_005866-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005866-T1KJC3_005866-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR014851
DBxrefPFAM:PF08740
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3972493..3974431 +
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