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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3974695..3977099+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005867-T1 ID=KJC3_005867-T1|Name=KJC3_005867-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2405bp|location=Sequence derived from alignment at ch4:3974695..3977099+ (Aspergillus niger KJC3)
TCCAGCCACATCGTGCCCGCAGTCCGATCCAGCGAGATGTCGAGGCTAAG
CGCCGACCCGGGCAATCAAGTTTCTTCCACTACGATACATATTCTTCACG
CTACTGCAGCCTCTCTTGCTCGGACCCTTGCCGCCGTCGATGTGTGCTTT
GACTTAGTATAGTATGGATAGATCGGGGCCCGTGCCTGGCCAGCTGGGCA
TGATGTTAGTGAGTGGGCGTTTACACAGGTGAGCTTATATATACACAGCG
TATCACCTAGGTCCCAAGGCTAAACAGAAGCAATTAGTTTGACAATTTCT
TTTCTCTTACAAATTGAGATACTAGATACGACTCCAAGGACGAAAGTCTG
ATTTTTTTTAGGTGACGACTGAGCAAGTCCATCACCATGAATCAGTTTCA
ACTCTTCCCATCACCCTCGGATAGCAGACCATCGAAGGAACTGCCAAGAG
TACCGAGAAAGCCAACTATGAAGACACCTACAGATATGAGACCCATGGAG
GAGATACGTGACAAGAGCAGTCCTACGGAAGCTGTCATCTTTAAACTTAT
CGAGGATACCCATACTAGAATTAAACCGCCGCCAAAGGCCATGTCCAGGT
CGAACCCAGTATCCATCCCAGAGACAATACGAGAGCGTGAAACATCTAAG
TCTCCTCTGCGACATGACCGCCACAAGCGGCCGACAGAGAGAGTTGGCTC
CCCTTCACACTCGGTCAGATCTTCGCCCCAGAACAGCTCACCTGCTGCAG
CACCGGTGGTGCCAATGAAGTCGACGTTCCCTCGATATAACTTCGACCTT
CCGATGAACCAACAGCACTACTACCCCGACCCTTCATTTAATGGTCACTG
GGATTTGCCTAGATCTGAGTCGGAGACACCACCCCCAGAGATAGATCGCG
CCCTTGGGCCTAAGACAGTTCCCGCAAGTGTGCTTAACTTTCCGGTTGGG
GTTCTTGATCCAGTGGAGAGATATTCCACGCAGGAAGAGCTGCAGAGTCT
ATGGGAAATTGCCAACGGTCAACGCCCACAGAGCCTTCCCGGGACTTTTA
ACCTGTGTCTTGAACGGTGAGTATATTCTTTCACCTTACTATGGCATATC
TGACCCCTACAGGCTCGACGCCAATATACTTTCATTCGGAGACCCAAAAT
CACCGTTCTATACACTGCAAACCAATTCAAAAAGTGACATATCAATTATC
CGAAAACACCCCTCCAAACATGATAGCAGCGTCCCCGTAATGAACCTAAA
ACTAGAAGACAAATCTCGTCGCCAACCTCCCTACGACGGACTGGTATCGA
TCCTATTTCCACGACTCGCAGGCATCCTAGCCATAGACCAAGCCGCAGAA
GTGGCGGGAGAGCTTCGTCTCTCACCCACGGAGGCGACCAAAGCAGAAGG
AGAAGCACTCAAACGAGTAGCAGCTCAGGAATCCTGCAAGTTGTTATGGA
ACCAATCGAAACGAGTGTACGAACTTCACCACCCCGCGTTGTGCAAGCAG
CCTCCCGCGCTGGTTGGTGCTGCTGGCATTCCTCTGTCGCCAGTACGTTC
GAAATATTCGGGCGTCCTACACATTACAGTTTCTAGTCTATCTAAGGAGG
GAGAATTCAGCCAACCACCCACCATTTTGGTTACTACCCCTCTGCCAGCC
AATGCCGTTGAGACGGGTGCCATGGCGGCTACGCCTCGCACATCGACGCT
CCCACTGACAGATGCCGATGAGCCTTTGGCGTCGTTGGATCTGAGGACCA
TGACCTTGTCGTTAGCGACGGGGTCCATAGTTGCGACGATCCCGTCGTTA
TATGCTGTTGACTGTCTCGTTTCTGCGCTACTGACTGTGGCGGTGTCTGA
CGAGTCTACGAGACCTGTTCTTGAGGGACTCAAGCTGTATGACCAGGGGA
CTTCAAGTTCCCCCTTGTCAAGCCCTAAAGAGATGATCACTACGCTAGCA
GAGCGGGAGGATGCTAAAGAAGGTAGTCAGCTGTGGTTGAAGGTAAAATC
GCAGCCTAACTCTGATGATCGAAAGCGGCACCAGTTCTGGAGCCGCAAGT
CCAAGGGGCCGAAGAACCGGACAATCGTAGTGGAGGAGTTCGACATGGAC
AAGTACGGGCGATACCCAGGAGGTCCACAGGAGGGAGAGGAGCTTCCGCG
GATTACCCAGGGATGCTTGCGGGTGTTGTTCTGGGGGTACAATGTGGTAG
TGCACGGAATTACAATGGTTGTCAAGGGGATTGCTTGGATGTTGGTGAAC
CTGACTCGGTGTTGTGCCACTGATAGTCATACTTTGTAAGGACTGATGAG
GATGATATGAATTATACCCTGTGGTTCGATATGGTTGCATTCCTTGATGT
CACGATACTCGCAGGGATTTTGTAGATGAAATCAAGAGCCAATTCATGAT
AAGAA back to topCoding sequence (CDS) from alignment at ch4:3974695..3977099+ >KJC3_005867-T1 ID=KJC3_005867-T1|Name=KJC3_005867-T1|organism=Aspergillus niger KJC3|type=CDS|length=3714bp|location=Sequence derived from alignment at ch4:3974695..3977099+ (Aspergillus niger KJC3)
ATGAATCAGTTTCAACTCTTCCCATCACCCTCGGATAGCAGACCATCGAA
GGAACTGCCAAGAGTACCGAGAAAGCCAACTATGAAGACACCTACAGATA
TGAGACCCATGGAGGAGATACGTGACAAGAGCAGTCCTACGGAAGCTGTC
ATCTTTAAACTTATCGAGGATACCCATACTAGAATTAAACCGCCGCCAAA
GGCCATGTCCAGGTCGAACCCAGTATCCATCCCAGAGACAATACGAGAGC
GTGAAACATCTAAGTCTCCTCTGCGACATGACCGCCACAAGCGGCCGACA
GAGAGAGTTGGCTCCCCTTCACACTCGGTCAGATCTTCGCCCCAGAACAG
CTCACCTGCTGCAGCACCGGTGGTGCCAATGAAGTCGACGTTCCCTCGAT
ATAACTTCGACCTTCCGATGAACCAACAGCACTACTACCCCGACCCTTCA
TTTAATGGTCACTGGGATTTGCCTAGATCTGAGTCGGAGACACCACCCCC
AGAGATAGATCGCGCCCTTGGGCCTAAGACAGTTCCCGCAAGTGTGCTTA
ACTTTCCGGTTGGGGTTCTTGATCCAGTGGAGAGATATTCCACGCAGGAA
GAGCTGCAGAGTCTATGGGAAATTGCCAACGGTCAACGCCCACAGAGCCT
TCCCGGGACTTTTAACCTGTGTCTTGAACGGCTCGACGCCAATATACTTT
CATTCGGAGACCCAAAATCACCGTTCTATACACTGCAAACCAATTCAAAA
AGTGACATATCAATTATCCGAAAACACCCCTCCAAACATGATAGCAGCGT
CCCCGTAATGAACCTAAAACTAGAAGACAAATCTCGTCGCCAACCTCCCT
ACGACGGACTGGTATCGATCCTATTTCCACGACTCGCAGGCATCCTAGCC
ATAGACCAAGCCGCAGAAGTGGCGGGAGAGCTTCGTCTCTCACCCACGGA
GGCGACCAAAGCAGAAGGAGAAGCACTCAAACGAGTAGCAGCTCAGGAAT
CCTGCAAGTTGTTATGGAACCAATCGAAACGAGTGTACGAACTTCACCAC
CCCGCGTTGTGCAAGCAGCCTCCCGCGCTGGTTGGTGCTGCTGGCATTCC
TCTGTCGCCAGTACGTTCGAAATATTCGGGCGTCCTACACATTACAGTTT
CTAGTCTATCTAAGGAGGGAGAATTCAGCCAACCACCCACCATTTTGGTT
ACTACCCCTCTGCCAGCCAATGCCGTTGAGACGGGTGCCATGGCGGCTAC
GCCTCGCACATCGACGCTCCCACTGACAGATGCCGATGAGCCTTTGGCGT
CGTTGGATCTGAGGACCATGACCTTGTCGTTAGCGACGGGGTCCATAGTT
GCGACGATCCCGTCGTTATATGCTGTTGACTGTCTCGTTTCTGCGCTACT
GACTGTGGCGGTGTCTGACGAGTCTACGAGACCTGTTCTTGAGGGACTCA
AGCTGTATGACCAGGGGACTTCAAGTTCCCCCTTGTCAAGCCCTAAAGAG
ATGATCACTACGCTAGCAGAGCGGGAGGATGCTAAAGAAGGTAGTCAGCT
GTGGTTGAAGGTAAAATCGCAGCCTAACTCTGATGATCGAAAGCGGCACC
AGTTCTGGAGCCGCAAGTCCAAGGGGCCGAAGAACCGGACAATCGTAGTG
GAGGAGTTCGACATGGACAAGTACGGGCGATACCCAGGAGGTCCACAGGA
GGGAGAGGAGCTTCCGCGGATTACCCAGGGATGCTTGCGGGTGTTGTTCT
GGGGGTACAATGTGGTAGTGCACGGAATTACAATGGTTGTCAAGGGGATT
GCTTGGATGTTGGTGAACCTGACTCGGTGTTGTGCCACTGATAGTCATAC
TTTGTAAATGAATCAGTTTCAACTCTTCCCATCACCCTCGGATAGCAGAC
CATCGAAGGAACTGCCAAGAGTACCGAGAAAGCCAACTATGAAGACACCT
ACAGATATGAGACCCATGGAGGAGATACGTGACAAGAGCAGTCCTACGGA
AGCTGTCATCTTTAAACTTATCGAGGATACCCATACTAGAATTAAACCGC
CGCCAAAGGCCATGTCCAGGTCGAACCCAGTATCCATCCCAGAGACAATA
CGAGAGCGTGAAACATCTAAGTCTCCTCTGCGACATGACCGCCACAAGCG
GCCGACAGAGAGAGTTGGCTCCCCTTCACACTCGGTCAGATCTTCGCCCC
AGAACAGCTCACCTGCTGCAGCACCGGTGGTGCCAATGAAGTCGACGTTC
CCTCGATATAACTTCGACCTTCCGATGAACCAACAGCACTACTACCCCGA
CCCTTCATTTAATGGTCACTGGGATTTGCCTAGATCTGAGTCGGAGACAC
CACCCCCAGAGATAGATCGCGCCCTTGGGCCTAAGACAGTTCCCGCAAGT
GTGCTTAACTTTCCGGTTGGGGTTCTTGATCCAGTGGAGAGATATTCCAC
GCAGGAAGAGCTGCAGAGTCTATGGGAAATTGCCAACGGTCAACGCCCAC
AGAGCCTTCCCGGGACTTTTAACCTGTGTCTTGAACGGCTCGACGCCAAT
ATACTTTCATTCGGAGACCCAAAATCACCGTTCTATACACTGCAAACCAA
TTCAAAAAGTGACATATCAATTATCCGAAAACACCCCTCCAAACATGATA
GCAGCGTCCCCGTAATGAACCTAAAACTAGAAGACAAATCTCGTCGCCAA
CCTCCCTACGACGGACTGGTATCGATCCTATTTCCACGACTCGCAGGCAT
CCTAGCCATAGACCAAGCCGCAGAAGTGGCGGGAGAGCTTCGTCTCTCAC
CCACGGAGGCGACCAAAGCAGAAGGAGAAGCACTCAAACGAGTAGCAGCT
CAGGAATCCTGCAAGTTGTTATGGAACCAATCGAAACGAGTGTACGAACT
TCACCACCCCGCGTTGTGCAAGCAGCCTCCCGCGCTGGTTGGTGCTGCTG
GCATTCCTCTGTCGCCAGTACGTTCGAAATATTCGGGCGTCCTACACATT
ACAGTTTCTAGTCTATCTAAGGAGGGAGAATTCAGCCAACCACCCACCAT
TTTGGTTACTACCCCTCTGCCAGCCAATGCCGTTGAGACGGGTGCCATGG
CGGCTACGCCTCGCACATCGACGCTCCCACTGACAGATGCCGATGAGCCT
TTGGCGTCGTTGGATCTGAGGACCATGACCTTGTCGTTAGCGACGGGGTC
CATAGTTGCGACGATCCCGTCGTTATATGCTGTTGACTGTCTCGTTTCTG
CGCTACTGACTGTGGCGGTGTCTGACGAGTCTACGAGACCTGTTCTTGAG
GGACTCAAGCTGTATGACCAGGGGACTTCAAGTTCCCCCTTGTCAAGCCC
TAAAGAGATGATCACTACGCTAGCAGAGCGGGAGGATGCTAAAGAAGGTA
GTCAGCTGTGGTTGAAGGTAAAATCGCAGCCTAACTCTGATGATCGAAAG
CGGCACCAGTTCTGGAGCCGCAAGTCCAAGGGGCCGAAGAACCGGACAAT
CGTAGTGGAGGAGTTCGACATGGACAAGTACGGGCGATACCCAGGAGGTC
CACAGGAGGGAGAGGAGCTTCCGCGGATTACCCAGGGATGCTTGCGGGTG
TTGTTCTGGGGGTACAATGTGGTAGTGCACGGAATTACAATGGTTGTCAA
GGGGATTGCTTGGATGTTGGTGAACCTGACTCGGTGTTGTGCCACTGATA
GTCATACTTTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005867-T1.utr3p1 | KJC3_005867-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3974695..3977099 + |
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