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KJC3_005869-T1, KJC3_005869-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005869-T1
Unique NameKJC3_005869-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3979132..3980958-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005869-T1 ID=KJC3_005869-T1|Name=KJC3_005869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1827bp|location=Sequence derived from alignment at ch4:3979132..3980958- (Aspergillus niger KJC3)
GTGTAACCTATGCTGCCCGGTTGCGACTTGCACTTTCACTCCAGATAATG
ATGTGTTTTTCACCTCTGATTTTCTCCTCTTCTGCATCCAACAGCACGCA
GTCATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGG
CGATCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAAT
ATGCGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACAC
AATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCC
TCAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAG
CTTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTG
GTAGGTATCCCTATGTTTCCACATATAGAAGGTCAATACTAAACCTCTGG
CAGTTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCAT
CCATCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATG
CGAGCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTC
GTCCTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCG
ATACTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCT
TCGCTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGT
GGCATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAG
CTGGATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCG
ACGTCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGC
CTAGTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGAT
CTACGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCA
ATGGCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTAC
GTCACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACA
CACCACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGC
CGCAAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACC
ACCTACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGAT
TCAAATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCC
AGGGCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATC
TCCTTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCA
TATCGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGA
AAATGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTG
GGTCCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCT
GCTGGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCG
GGGATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAG
ATTTGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTT
TGCTGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGA
TGTATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCAT
GCTTGATAGATACCAGTATAGTTAGCA
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Coding sequence (CDS) from alignment at ch4:3979132..3980958-

>KJC3_005869-T1 ID=KJC3_005869-T1|Name=KJC3_005869-T1|organism=Aspergillus niger KJC3|type=CDS|length=3300bp|location=Sequence derived from alignment at ch4:3979132..3980958- (Aspergillus niger KJC3)
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGAATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGG
CGATCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAAT
ATGCGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACAC
AATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCC
TCAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAG
CTTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTG
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGAATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGG
CGATCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAAT
ATGCGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACAC
AATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCC
TCAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAG
CTTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PNS1KJC3_005869Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005869-T1KJC3_005869-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005869-T1.cdsKJC3_005869-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005869-T1.utr3p1KJC3_005869-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005869-T1.exon2KJC3_005869-T1.exon2Aspergillus niger KJC3exon
KJC3_005869-T1.exon1KJC3_005869-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005869-T1.utr5p1KJC3_005869-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007603
DBxrefPFAM:PF04515
Product neither null mutation nor overexpression affects choline transport
ProductPutative choline transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3979132..3980958 -
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