|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3981084..3984199- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005870-T1 ID=KJC3_005870-T1|Name=KJC3_005870-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3116bp|location=Sequence derived from alignment at ch4:3981084..3984199- (Aspergillus niger KJC3)
CTTCGCTGGAAATCGTACGCGCTAGACTCGATCGAGGCCCGCAGCGATTT
TCCCCTTTTCCCTTTCGGCTCTCGCTTTTTATTCTTCGTCGTCGTCGTCG
TCCTTCTCCTCTTTTTTTGACTCTTCTCTTGCTCTTGTTTCGTCGTGAGA
TGAAGTCTCGGATTGACCCTCTGGCAGGTTCGTGAGACTTGGTTGATGGA
CTGCTGCATCGCGCGCTGCCGGGGCGACTATTAACTTGGCCTGCACATTT
CTTTTCCATCCGCTCGTTTCACTTCGCGCCTGACGGGGCAGCTCGACCGC
TTGACCGGTCTCCTCACTCGTTCACCACTGCCCTGCAGTCTTATTCTACG
CGCTTAACTTCCTCGTTTCTTTTCCTCCTCTTCAACTCGCCTCCCCTTTG
CCTCTTTACCCATCCTTATCAACTATCGCCGTCCGCCCCCCTGAAATCAG
TCCTCGACTGCGTCTTTCCATTCTACACTCACCAACCAATGTCCAGCGGG
AACTGGGATCTATCATCTCGTGGCCATGGTCACAGGAAATGGAGACTTTC
GATATCCGCCCCTTGCAGGCGCGCATGATATCCCCAGCCGACGCAGGATC
CCGAACCCTCCCCGCCTAGATCCGTTGAGACTCAATCCTCCCTTTCCACG
CCCCTCGACCGCCGACGGCGTTCGCCCTCCCCCTTCTCAGCGCCCTCCCG
TGCCTTCCCCGCGACTGCACCCTGCAAAGGCGGCTGCTGCTGATCCATCA
TGGCGCTCCCCATCGCCTCAACCCAAAGATGACGACTATTTCGTCCCCCG
CACGCCCGCCCTCCGTACGCCAACATACCCGGTGTCACCCAATCCTCGGC
CGGGATATCCTCCCAGAGAGATTGAATTCGATCGCCCACCGCCCCGGAAG
CTTCCGCCAGGCGCACCAGGGTTGCGCATTTCCATGTCTACCTCCAAATT
GCACAGTCGACGCCAGCGACCTCCTCGGTCACGAGAACGGTATCCAGATG
ATGCGTATGGGTTGGCATTGCCTCGCGTCGTGCCTCCGGGGAGCTATGCA
GACACACATGGAGAGGATGCACTGCGATCTAGTGTTAACTCGGCCATGAC
GTCGCGATCCAGCATCGAGCAAGCCAGCGGAACTGAGCGCAGTAGTGTTC
TCACAAAGAGTAGCTCGATTACCGACTTGTCTCCTGACACGCCCGATGGA
CCATGCGAAAAAGATGGGGGCATGAGTGTGGAGGATGCCATTTCCATGTA
CCTCGACGGATTCAGCGATGTCACGGAAGAACCTGGATCACCAGATATAT
ACGACGATGAAAAAGTAAGGCCATGGAGTCCATGTCCGCCCACAGAATAT
ACGCTCGATGATGGCCATACTTCCGATGAGCATTCGCCCGATCTGGATCC
CACTGAGGATCTTCCGCCTGTACCACCGCTCCCTGAGCTGAGTGCCCCTG
TACGAGGGCCACTAAGCGATCGCCATGAGGCCGAGGAAGTCCCACATGAA
GAGCCAACCGTTGAAGCACCATTAAAATCACCCAGTGTCGAACGTCAAGA
AAGAAAGGTCGTGCTGCCCGGAGTGGTGCCTCCGCCCCTGCTTTTGGGAA
CGGACTCGCGCGATCGCTACGGGTTCCGAAAGGCTACCCATCATGTGACC
CTGGCCCAGTACGAGGCGTGGAGCAGCTCATACTCCGACTTTGCCGCGAA
CCAGCGAATCAAGTGGGTGGAACTGCTCCGCCAGAATCGGCTGCCGATCA
CAGATCCGATCTCCTTCCCGCCAAAGTCAAACAAAGTCAAAAAGTTTGTG
CGCAAGGGTATTCCGTCGGAGTATCGAGGAGCCGCCTGGTTCTTCTACGC
TGGCGGCTATGAGCACCTGAACCGGAATCCTGGGCTCTACGAGCAGCTTG
TCCGGCAGGCCATGGATTCCCCGAGCAACGACGACAAGGAACACATTGAA
CGCGATTTACATCGAACGTTTCCGGATAACATCCACTTTAAACCCGAATC
GGTCGAACAATACGGAGGCTCCAGCGCTGGCGCTGGAAGCAGCAACCCGA
AACATGAGTCCGTCACGGTTGAGACAGAGATGATCCAGTCGCTCCGCCGC
GTGCTATATGCATTCGCAGTGCACAACCCCCAGATCGGGTATACGCAGTC
GCTGAACTTTATCACGGGACTGCTGCTCCTGTTCATGCCGGAAGAAAAGG
CGTTCTGGATGCTGCACATCATCAGCTCGGTGTATCTCCCCAGCACGCAC
GAGATCAGCCTGGAGGGCGCTAATATCGACCTGTGGATTCTCATGGTGCT
GCTCAAGGAGACGTCGCCGCATGTATACAACAAGATCGCTGGCGGGCTCG
GTGGCGGCTCGCGGGCGCCCGCACTGACGGTGACGTCGCGGCTGCCGGAC
ATCACGTTGGGGCTGACGAACTGGCTGATGTCGGTGTTCATCGGGACGTT
GCCCCTGGAGACGACACTGCGGGTGTGGGATGTATTCTTCTATGAAGGAT
CCAAGACGTTCTTCCGCGTGTCACTGGCTATCTTCAAGTCGTGCGAGCGA
GAGATCATGGCGGTGTCAGATCCAATGGAGGTGTTTCAGGTGGTGCAGAC
AGTGCCGAAGAAGCTGCTGGACGCCAATACTCTGATGGACGACTGTTTCG
TGCGACGACACCGGGTTGGACAAGGCCGCATCGACGAGCTGCGCGCGGCG
CGACGGGCAGCAGTTCGACACGAGAACATGCGGCGATCGCGGGCGTGGAA
CAAAGGCCAGATCCAGGCAGCGACGGACGAGTGGCCAGGACGATCGCGAA
CACCCATCCCAGGCATCGAGCGCAAGATAGGGGATTCGTGGCGACACATG
CGGAACCATGCATTTCGGTAGGAGCTGAGGAGTGATGGATGGCTTTTATT
GATACCCCCAAAGCAGCTTTATTGTATTTCAACCGGTCAGTCCACCGTTT
ACCTGGTCCGGACTATCTATTTGTACTCTGCGACCTCTTAATCTTAATAG
ACTCGCGGGTTTCAGGGCGCAGGCCGGAGGGACTGACGACATGCCTGACG
ATGTTACATGTAAATACTGCATATTAGCTTAGATATATGAGTGGCATTGA
TTCACATTTTTATTTC back to topCoding sequence (CDS) from alignment at ch4:3981084..3984199- >KJC3_005870-T1 ID=KJC3_005870-T1|Name=KJC3_005870-T1|organism=Aspergillus niger KJC3|type=CDS|length=2346bp|location=Sequence derived from alignment at ch4:3981084..3984199- (Aspergillus niger KJC3)
ATGGTCACAGGAAATGGAGACTTTCGATATCCGCCCCTTGCAGGCGCGCA
TGATATCCCCAGCCGACGCAGGATCCCGAACCCTCCCCGCCTAGATCCGT
TGAGACTCAATCCTCCCTTTCCACGCCCCTCGACCGCCGACGGCGTTCGC
CCTCCCCCTTCTCAGCGCCCTCCCGTGCCTTCCCCGCGACTGCACCCTGC
AAAGGCGGCTGCTGCTGATCCATCATGGCGCTCCCCATCGCCTCAACCCA
AAGATGACGACTATTTCGTCCCCCGCACGCCCGCCCTCCGTACGCCAACA
TACCCGGTGTCACCCAATCCTCGGCCGGGATATCCTCCCAGAGAGATTGA
ATTCGATCGCCCACCGCCCCGGAAGCTTCCGCCAGGCGCACCAGGGTTGC
GCATTTCCATGTCTACCTCCAAATTGCACAGTCGACGCCAGCGACCTCCT
CGGTCACGAGAACGGTATCCAGATGATGCGTATGGGTTGGCATTGCCTCG
CGTCGTGCCTCCGGGGAGCTATGCAGACACACATGGAGAGGATGCACTGC
GATCTAGTGTTAACTCGGCCATGACGTCGCGATCCAGCATCGAGCAAGCC
AGCGGAACTGAGCGCAGTAGTGTTCTCACAAAGAGTAGCTCGATTACCGA
CTTGTCTCCTGACACGCCCGATGGACCATGCGAAAAAGATGGGGGCATGA
GTGTGGAGGATGCCATTTCCATGTACCTCGACGGATTCAGCGATGTCACG
GAAGAACCTGGATCACCAGATATATACGACGATGAAAAAGTAAGGCCATG
GAGTCCATGTCCGCCCACAGAATATACGCTCGATGATGGCCATACTTCCG
ATGAGCATTCGCCCGATCTGGATCCCACTGAGGATCTTCCGCCTGTACCA
CCGCTCCCTGAGCTGAGTGCCCCTGTACGAGGGCCACTAAGCGATCGCCA
TGAGGCCGAGGAAGTCCCACATGAAGAGCCAACCGTTGAAGCACCATTAA
AATCACCCAGTGTCGAACGTCAAGAAAGAAAGGTCGTGCTGCCCGGAGTG
GTGCCTCCGCCCCTGCTTTTGGGAACGGACTCGCGCGATCGCTACGGGTT
CCGAAAGGCTACCCATCATGTGACCCTGGCCCAGTACGAGGCGTGGAGCA
GCTCATACTCCGACTTTGCCGCGAACCAGCGAATCAAGTGGGTGGAACTG
CTCCGCCAGAATCGGCTGCCGATCACAGATCCGATCTCCTTCCCGCCAAA
GTCAAACAAAGTCAAAAAGTTTGTGCGCAAGGGTATTCCGTCGGAGTATC
GAGGAGCCGCCTGGTTCTTCTACGCTGGCGGCTATGAGCACCTGAACCGG
AATCCTGGGCTCTACGAGCAGCTTGTCCGGCAGGCCATGGATTCCCCGAG
CAACGACGACAAGGAACACATTGAACGCGATTTACATCGAACGTTTCCGG
ATAACATCCACTTTAAACCCGAATCGGTCGAACAATACGGAGGCTCCAGC
GCTGGCGCTGGAAGCAGCAACCCGAAACATGAGTCCGTCACGGTTGAGAC
AGAGATGATCCAGTCGCTCCGCCGCGTGCTATATGCATTCGCAGTGCACA
ACCCCCAGATCGGGTATACGCAGTCGCTGAACTTTATCACGGGACTGCTG
CTCCTGTTCATGCCGGAAGAAAAGGCGTTCTGGATGCTGCACATCATCAG
CTCGGTGTATCTCCCCAGCACGCACGAGATCAGCCTGGAGGGCGCTAATA
TCGACCTGTGGATTCTCATGGTGCTGCTCAAGGAGACGTCGCCGCATGTA
TACAACAAGATCGCTGGCGGGCTCGGTGGCGGCTCGCGGGCGCCCGCACT
GACGGTGACGTCGCGGCTGCCGGACATCACGTTGGGGCTGACGAACTGGC
TGATGTCGGTGTTCATCGGGACGTTGCCCCTGGAGACGACACTGCGGGTG
TGGGATGTATTCTTCTATGAAGGATCCAAGACGTTCTTCCGCGTGTCACT
GGCTATCTTCAAGTCGTGCGAGCGAGAGATCATGGCGGTGTCAGATCCAA
TGGAGGTGTTTCAGGTGGTGCAGACAGTGCCGAAGAAGCTGCTGGACGCC
AATACTCTGATGGACGACTGTTTCGTGCGACGACACCGGGTTGGACAAGG
CCGCATCGACGAGCTGCGCGCGGCGCGACGGGCAGCAGTTCGACACGAGA
ACATGCGGCGATCGCGGGCGTGGAACAAAGGCCAGATCCAGGCAGCGACG
GACGAGTGGCCAGGACGATCGCGAACACCCATCCCAGGCATCGAGCGCAA
GATAGGGGATTCGTGGCGACACATGCGGAACCATGCATTTCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005870-T1.utr3p1 | KJC3_005870-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005870-T1.utr5p1 | KJC3_005870-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035969 |
| DBxref | InterPro:IPR000195 |
| DBxref | PFAM:PF00566 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3981084..3984199 - |
|
