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KJC3_005912-T1, KJC3_005912-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005912-T1
Unique NameKJC3_005912-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4119671..4121072+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005912-T1 ID=KJC3_005912-T1|Name=KJC3_005912-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1402bp|location=Sequence derived from alignment at ch4:4119671..4121072+ (Aspergillus niger KJC3)
AGGTACCCAGGGTTCCCGCCCCATCGGTCGGTCCGCCCACCTCCGTCTTC
GCCGACCGGTCTGGATGACGCTGCTCCTCGTTCACACACCCCGGAGGGAG
ATCTGATACATTCATCCCCTCCAGTTCATCATATCCCCACATCTTAAATA
TGCCTCTGTCAGTATACCCTCTGCTTCCTGTCTTGCCATGCTTGAGTACT
TACAGTGTCCTTTTGCAGTCACCTCCTCGGCAAGAAGTCATGGAACGTCT
ACAACCCAGCGAACATCGAGCGCGTTCGGCGCGACGAGGCCCAGGCCAAA
GCCCAAGAAGAGGAGGAAGAGCGTCTCATGCAGGAAGCTGATGCTGAACG
AAGGATTCAGATACTCCGCGGTGAACGACCTTCGACTCCACCTCCGCCGC
CCCCAGCGCCGTCCGCCCGCCCACAAGACCGGAAAAGTCATACAGAGGAT
GCAGGCCGCTTTAGAAAGAGAAGGCGCTTAGCAGGAGAGGATGACACGGA
TAGAGATATTAGATTTGCACAGGAAGATGCACGGTTGGCGCTGGATAGAC
GGGAACAACAAGCCGCCGCTCGGTCAAGCGATGCGCCACTTCATGATAGT
ACTGGTCACATTGATCTGTTTCCTTCGGAGGCGAAGCACAAGCCTGTGGA
AAAGAATGCAGAGGCAGAAAAGGAGGCGAAAGAAAAGGAACGAGAACTTG
AAGACCAATACACGATGCGATTCTCCAACGCGGCGGGGTTTCGGCAGCCT
GTTGGGCAAGACCCTTGGTACTCGTCTTCGCAACGCGAGGGTGCAGCTGC
TGAATCTATGCCAAGCAAGGATGTTTGGGGAAATGAGGACCCGTTAAGGA
GAGAAAGGGAGAAGGCCCGGATGGATGCAAATGATCCACTCGCGGCGATG
AGAAAGGGCGTCCGTCAGTTGAAGGCGGTTGAGCAGGAGAGGAAAAGGTG
GAACGAGGAACGAGGTCGAGAGCTGGAAGCTCTGAAGGCTTCAGAAAAGC
GTCGATCTTCTCACCGCAGTAGGAGGTCGCCATCGCAGGATAGCCTCGAA
GGCTTTAGACTCGATCCTTCTCCGGATAGGCGTCGAGATGACAGGGACGG
AAGATCCCATCGGCACCATCGGCATCGTAGAGATAGAAGTCGAGATCGTT
CGCATCGACAACCCTCTCATTCTGATTCGCGGTCTCATCGTTCTCATCAT
GATCGACACCGTCGACACAGGGAAACTAGACGCCATGATGAAGACTCCCG
ATCGAGACGCTGAAGGGTCCAGATCCGCACCCACACCAGGACTTCATGGG
CAGCTTACAATCCTAGGCCCTCTAGTACACGATCTAAAGCTACGTTCGTT
GAGTCGTACTCTTAGTCGATTGAAGCAGGTGGCGAGCCTTGTTTATGACT
AA
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Coding sequence (CDS) from alignment at ch4:4119671..4121072+

>KJC3_005912-T1 ID=KJC3_005912-T1|Name=KJC3_005912-T1|organism=Aspergillus niger KJC3|type=CDS|length=3393bp|location=Sequence derived from alignment at ch4:4119671..4121072+ (Aspergillus niger KJC3)
ATGCCTCTTCACCTCCTCGGCAAGAAGTCATGGAACGTCTACAACCCAGC
GAACATCGAGCGCGTTCGGCGCGACGAGGCCCAGGCCAAAGCCCAAGAAG
AGGAGGAAGAGCGTCTCATGCAGGAAGCTGATGCTGAACGAAGGATTCAG
ATACTCCGCGGTGAACGACCTTCGACTCCACCTCCGCCGCCCCCAGCGCC
GTCCGCCCGCCCACAAGACCGGAAAAGTCATACAGAGGATGCAGGCCGCT
TTAGAAAGAGAAGGCGCTTAGCAGGAGAGGATGACACGGATAGAGATATT
AGATTTGCACAGGAAGATGCACGGTTGGCGCTGGATAGACGGGAACAACA
AGCCGCCGCTCGGTCAAGCGATGCGCCACTTCATGATAGTACTGGTCACA
TTGATCTGTTTCCTTCGGAGGCGAAGCACAAGCCTGTGGAAAAGAATGCA
GAGGCAGAAAAGGAGGCGAAAGAAAAGGAACGAGAACTTGAAGACCAATA
CACGATGCGATTCTCCAACGCGGCGGGGTTTCGGCAGCCTGTTGGGCAAG
ACCCTTGGTACTCGTCTTCGCAACGCGAGGGTGCAGCTGCTGAATCTATG
CCAAGCAAGGATGTTTGGGGAAATGAGGACCCGTTAAGGAGAGAAAGGGA
GAAGGCCCGGATGGATGCAAATGATCCACTCGCGGCGATGAGAAAGGGCG
TCCGTCAGTTGAAGGCGGTTGAGCAGGAGAGGAAAAGGTGGAACGAGGAA
CGAGGTCGAGAGCTGGAAGCTCTGAAGGCTTCAGAAAAGCGTCGATCTTC
TCACCGCAGCGTCGAGATGACAGGGACGGAAGATCCCATCGGCACCATCG
GCATCGTAGAGATAGAAGTCGAGATCGTTCGCATCGACAACCCTCTCATT
CTGATTCGCGGTCTCATCGTTCTCATCATGATCGACACCGTCGACACAGG
GAAACTAGACGCCATGATGAAGACTCCCGATCGAGACGCTGAAGGGTCCA
GATCCGCACCCACACCAGGACTTCATGGGCAGCTTACAATCCTAGGCCCT
CTAGTACACGATCTAAAGCTACGTTCGTTGAGTCGTACTCTTAGTCGATT
GAAGCAGGTGGCGAGCCTTGTTTATGACTAAATGCCTCTTCACCTCCTCG
GCAAGAAGTCATGGAACGTCTACAACCCAGCGAACATCGAGCGCGTTCGG
CGCGACGAGGCCCAGGCCAAAGCCCAAGAAGAGGAGGAAGAGCGTCTCAT
GCAGGAAGCTGATGCTGAACGAAGGATTCAGATACTCCGCGGTGAACGAC
CTTCGACTCCACCTCCGCCGCCCCCAGCGCCGTCCGCCCGCCCACAAGAC
CGGAAAAGTCATACAGAGGATGCAGGCCGCTTTAGAAAGAGAAGGCGCTT
AGCAGGAGAGGATGACACGGATAGAGATATTAGATTTGCACAGGAAGATG
CACGGTTGGCGCTGGATAGACGGGAACAACAAGCCGCCGCTCGGTCAAGC
GATGCGCCACTTCATGATAGTACTGGTCACATTGATCTGTTTCCTTCGGA
GGCGAAGCACAAGCCTGTGGAAAAGAATGCAGAGGCAGAAAAGGAGGCGA
AAGAAAAGGAACGAGAACTTGAAGACCAATACACGATGCGATTCTCCAAC
GCGGCGGGGTTTCGGCAGCCTGTTGGGCAAGACCCTTGGTACTCGTCTTC
GCAACGCGAGGGTGCAGCTGCTGAATCTATGCCAAGCAAGGATGTTTGGG
GAAATGAGGACCCGTTAAGGAGAGAAAGGGAGAAGGCCCGGATGGATGCA
AATGATCCACTCGCGGCGATGAGAAAGGGCGTCCGTCAGTTGAAGGCGGT
TGAGCAGGAGAGGAAAAGGTGGAACGAGGAACGAGGTCGAGAGCTGGAAG
CTCTGAAGGCTTCAGAAAAGCGTCGATCTTCTCACCGCAGCGTCGAGATG
ACAGGGACGGAAGATCCCATCGGCACCATCGGCATCGTAGAGATAGAAGT
CGAGATCGTTCGCATCGACAACCCTCTCATTCTGATTCGCGGTCTCATCG
TTCTCATCATGATCGACACCGTCGACACAGGGAAACTAGACGCCATGATG
AAGACTCCCGATCGAGACGCTGAAGGGTCCAGATCCGCACCCACACCAGG
ACTTCATGGGCAGCTTACAATCCTAGGCCCTCTAGTACACGATCTAAAGC
TACGTTCGTTGAGTCGTACTCTTAGTCGATTGAAGCAGGTGGCGAGCCTT
GTTTATGACTAAATGCCTCTTCACCTCCTCGGCAAGAAGTCATGGAACGT
CTACAACCCAGCGAACATCGAGCGCGTTCGGCGCGACGAGGCCCAGGCCA
AAGCCCAAGAAGAGGAGGAAGAGCGTCTCATGCAGGAAGCTGATGCTGAA
CGAAGGATTCAGATACTCCGCGGTGAACGACCTTCGACTCCACCTCCGCC
GCCCCCAGCGCCGTCCGCCCGCCCACAAGACCGGAAAAGTCATACAGAGG
ATGCAGGCCGCTTTAGAAAGAGAAGGCGCTTAGCAGGAGAGGATGACACG
GATAGAGATATTAGATTTGCACAGGAAGATGCACGGTTGGCGCTGGATAG
ACGGGAACAACAAGCCGCCGCTCGGTCAAGCGATGCGCCACTTCATGATA
GTACTGGTCACATTGATCTGTTTCCTTCGGAGGCGAAGCACAAGCCTGTG
GAAAAGAATGCAGAGGCAGAAAAGGAGGCGAAAGAAAAGGAACGAGAACT
TGAAGACCAATACACGATGCGATTCTCCAACGCGGCGGGGTTTCGGCAGC
CTGTTGGGCAAGACCCTTGGTACTCGTCTTCGCAACGCGAGGGTGCAGCT
GCTGAATCTATGCCAAGCAAGGATGTTTGGGGAAATGAGGACCCGTTAAG
GAGAGAAAGGGAGAAGGCCCGGATGGATGCAAATGATCCACTCGCGGCGA
TGAGAAAGGGCGTCCGTCAGTTGAAGGCGGTTGAGCAGGAGAGGAAAAGG
TGGAACGAGGAACGAGGTCGAGAGCTGGAAGCTCTGAAGGCTTCAGAAAA
GCGTCGATCTTCTCACCGCAGCGTCGAGATGACAGGGACGGAAGATCCCA
TCGGCACCATCGGCATCGTAGAGATAGAAGTCGAGATCGTTCGCATCGAC
AACCCTCTCATTCTGATTCGCGGTCTCATCGTTCTCATCATGATCGACAC
CGTCGACACAGGGAAACTAGACGCCATGATGAAGACTCCCGATCGAGACG
CTGAAGGGTCCAGATCCGCACCCACACCAGGACTTCATGGGCAGCTTACA
ATCCTAGGCCCTCTAGTACACGATCTAAAGCTACGTTCGTTGAGTCGTAC
TCTTAGTCGATTGAAGCAGGTGGCGAGCCTTGTTTATGACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005912KJC3_005912Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005912-T1.utr5p1KJC3_005912-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005912-T1.exon1KJC3_005912-T1.exon1Aspergillus niger KJC3exon
KJC3_005912-T1.exon2KJC3_005912-T1.exon2Aspergillus niger KJC3exon
KJC3_005912-T1.exon3KJC3_005912-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005912-T1.cdsKJC3_005912-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005912-T1KJC3_005912-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019339
DBxrefPFAM:PF10197
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4119671..4121072 +
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