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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4123412..4125549+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005914-T1 ID=KJC3_005914-T1|Name=KJC3_005914-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2138bp|location=Sequence derived from alignment at ch4:4123412..4125549+ (Aspergillus niger KJC3)
GCTTCCCTCACAGCATCCTAGACCAACAATCCCTCTTGCTCGCCTGCCAG
ATATCCCCCCTTGAAGTCCACTGTTATTACCGTTGCAGCTGCAGAGAGTC
CGTGACACTCTGTTTGTTTGACCTACTCTCCCTTACATGTCCCTCTAGCT
GGTGTGCTGCCCGCGAGGAGCCACTATCCCCTCCGCCTTCACTCCCTCCC
TGTTTTGGTTTTGTTGCCAATACAAACAACCATGGCCTTCTTCTTCAACC
GCGGTCGGTCCCGCCAGCCTTCGGACATTGCCAGATCAATTAAAGAACTC
TTGGTGAGGCTTCGAGAATCGCCAACCACTGCCAAGGTTCGTCGCTCAGA
TCTGTTATGTTTACGTCTACGGTTGCCGATAAGCAGCTTTCAAAACAAAG
GAGTACTGACCCCATTCCGTACTCCGACAGGTCGAAGATGAGCTGGCGAA
GCAACTATCTCAGATGAAACTTATTGTCCAGGGTACTCAAGGTATGTCTC
ATGCATGAACCCCTACCAATGGCTCTCTTTCTCCCGGAACAAGTGCAGGA
GCAGAGAAGGGCTTCTAAATGTACCTCGGCTGATGTGAGCTTGCCTTTCA
GAAATCGAGGTGTCCCCCGAACAAGTCCAGGCATTGGTGCAGGCTACCCT
GCAGGAAGACTTGCTCTACGAACTAGCCCAAGGGCTTCATCGCCTGCCCT
TCGAAGCCCGGAAAGACACACAAACCATCTTCTCACACATCCTCCGTTTC
AAACCTGTCAATGCAAACCATGCAGACCCTCCTGTCATTTCCTACATTGT
CCACAAACGACCCGAAATCATCATCGAACTGTGCAAGGGCTATGAACATA
GCCAAAGTGCCATGCCATGCGGCACTATCTTGCGAGAAGCGCTGAAGTTT
GATGTTATCGCGGCGATCATCCTCTATGACCAGTCGGAAGACGGGGAGCC
AGCGATTCGCCTGACGGAGGTCCAGCCAGGCGTGCCTCAAGAGGGCAATG
GTATATTCTGGAGGTTCTTCTACTGGATCGACCGAGGGAGCTTCGAACTG
AGTGCCGACTCTTTCACAACGTTTAGGGTGAGTGTTTGTGTCAGCCTTGG
GAACCATGTCGTCTCGGAAGCTAACTGATGTGCAGGAGATATTGACCCGC
CATAAATCCATCGTTACGGGTTATCTAGCCACGAACTTTGATCTCTTCTT
CTCCAAATTCAACGAAGTACTTGTTCAGTCAAGCTCGTATGTCACGAAAC
GACAAAGCATCAAGCTACTAGGAGAGATCCTCCTGGACCGAACCAACTAC
AATGTGATGATGGCCTATGTGGAGAGTGGGGAGAATCTCAAGTTGTGTAT
GAAACTGCTGCGGGACGACCGAAAGATGGTCCAGTACGAAGGCTTCCACG
TGTTCAAGGTATGTGGGCAGATTCCAGCTTGGTCCGCTGCAAGGATCCAG
GCCACTGACCGTTATTACATTACAGGTATTTGTTGCCAACCCCAATAAAT
CGGTTGCGGTGCAGCGGATTTTGATCAACAACCGTGATCGGCTGTTGAAA
TTCTTACCGAGGTTCCTAGAGGACCGGACGGACGACGATCAATTTACGGA
TGAGAAGAGTTTCCTGGTGCGCCAGATCGAGCTTCTCCCCAAGGAGCCGA
TTGAGCCAGCACGCTCCGCGCGCGAAGCGTCTCGCTCCGGCATCAACACG
GCAGCAGTGGCCTGAAGGCCTAGGAGTCGAGAATTAAGCTGCGACCATTG
GCAGGGAAACGGCCAATCTATCGATCCTCCCGTGCCAATATGCTTTTTAC
CCCTGCTTGTCCTTTGTCGACTATGTGCGGGTCTGCGTCGGAGGGCCGTG
TGCACTGGGGGCACGCTAAGGCCGCGGTGCCGTTTGTTTGCATTGAAGGC
GAGCTGGTTTCTAGCCTTCTCGGAGTTTTACAGTGGGTTGTCACAATCTA
AAGGGAAAGAAAGGAGACAGAAATTAGGGTTTGATTTTAAAACCTGAAAA
TCGGCAGAAGGCGAAGGGCAGAAAGGAGAAAGAAGTGCACGAGAATAAAG
AATCGCCCCAAAGGGCAGCAGTCCTTGCATGTAAGTAACGCGGGATGTAG
ATAAAGTCAGTAGGCAAATCATGGAAGTGGATCAGAGC back to topCoding sequence (CDS) from alignment at ch4:4123412..4125549+ >KJC3_005914-T1 ID=KJC3_005914-T1|Name=KJC3_005914-T1|organism=Aspergillus niger KJC3|type=CDS|length=5775bp|location=Sequence derived from alignment at ch4:4123412..4125549+ (Aspergillus niger KJC3)
ATGGCCTTCTTCTTCAACCGCGGTCGGTCCCGCCAGCCTTCGGACATTGC
CAGATCAATTAAAGAACTCTTGGTGAGGCTTCGAGAATCGCCAACCACTG
CCAAGGTCGAAGATGAGCTGGCGAAGCAACTATCTCAGATGAAACTTATT
GTCCAGGGTACTCAAGAAATCGAGGTGTCCCCCGAACAAGTCCAGGCATT
GGTGCAGGCTACCCTGCAGGAAGACTTGCTCTACGAACTAGCCCAAGGGC
TTCATCGCCTGCCCTTCGAAGCCCGGAAAGACACACAAACCATCTTCTCA
CACATCCTCCGTTTCAAACCTGTCAATGCAAACCATGCAGACCCTCCTGT
CATTTCCTACATTGTCCACAAACGACCCGAAATCATCATCGAACTGTGCA
AGGGCTATGAACATAGCCAAAGTGCCATGCCATGCGGCACTATCTTGCGA
GAAGCGCTGAAGTTTGATGTTATCGCGGCGATCATCCTCTATGACCAGTC
GGAAGACGGGGAGCCAGCGATTCGCCTGACGGAGGTCCAGCCAGGCGTGC
CTCAAGAGGGCAATGGTATATTCTGGAGGTTCTTCTACTGGATCGACCGA
GGGAGCTTCGAACTGAGTGCCGACTCTTTCACAACGTTTAGGGAGATATT
GACCCGCCATAAATCCATCGTTACGGGTTATCTAGCCACGAACTTTGATC
TCTTCTTCTCCAAATTCAACGAAGTACTTGTTCAGTCAAGCTCGTATGTC
ACGAAACGACAAAGCATCAAGCTACTAGGAGAGATCCTCCTGGACCGAAC
CAACTACAATGTGATGATGGCCTATGTGGAGAGTGGGGAGAATCTCAAGT
TGTGTATGAAACTGCTGCGGGACGACCGAAAGATGGTCCAGTACGAAGGC
TTCCACGTGTTCAAGGTATTTGTTGCCAACCCCAATAAATCGGTTGCGGT
GCAGCGGATTTTGATCAACAACCGTGATCGGCTGTTGAAATTCTTACCGA
GGTTCCTAGAGGACCGGACGGACGACGATCAATTTACGGATGAGAAGAGT
TTCCTGGTGCGCCAGATCGAGCTTCTCCCCAAGGAGCCGATTGAGCCAGC
ACGCTCCGCGCGCGAAGCGTCTCGCTCCGGCATCAACACGGCAGCAGTGG
CCTGAATGGCCTTCTTCTTCAACCGCGGTCGGTCCCGCCAGCCTTCGGAC
ATTGCCAGATCAATTAAAGAACTCTTGGTGAGGCTTCGAGAATCGCCAAC
CACTGCCAAGGTCGAAGATGAGCTGGCGAAGCAACTATCTCAGATGAAAC
TTATTGTCCAGGGTACTCAAGAAATCGAGGTGTCCCCCGAACAAGTCCAG
GCATTGGTGCAGGCTACCCTGCAGGAAGACTTGCTCTACGAACTAGCCCA
AGGGCTTCATCGCCTGCCCTTCGAAGCCCGGAAAGACACACAAACCATCT
TCTCACACATCCTCCGTTTCAAACCTGTCAATGCAAACCATGCAGACCCT
CCTGTCATTTCCTACATTGTCCACAAACGACCCGAAATCATCATCGAACT
GTGCAAGGGCTATGAACATAGCCAAAGTGCCATGCCATGCGGCACTATCT
TGCGAGAAGCGCTGAAGTTTGATGTTATCGCGGCGATCATCCTCTATGAC
CAGTCGGAAGACGGGGAGCCAGCGATTCGCCTGACGGAGGTCCAGCCAGG
CGTGCCTCAAGAGGGCAATGGTATATTCTGGAGGTTCTTCTACTGGATCG
ACCGAGGGAGCTTCGAACTGAGTGCCGACTCTTTCACAACGTTTAGGGAG
ATATTGACCCGCCATAAATCCATCGTTACGGGTTATCTAGCCACGAACTT
TGATCTCTTCTTCTCCAAATTCAACGAAGTACTTGTTCAGTCAAGCTCGT
ATGTCACGAAACGACAAAGCATCAAGCTACTAGGAGAGATCCTCCTGGAC
CGAACCAACTACAATGTGATGATGGCCTATGTGGAGAGTGGGGAGAATCT
CAAGTTGTGTATGAAACTGCTGCGGGACGACCGAAAGATGGTCCAGTACG
AAGGCTTCCACGTGTTCAAGGTATTTGTTGCCAACCCCAATAAATCGGTT
GCGGTGCAGCGGATTTTGATCAACAACCGTGATCGGCTGTTGAAATTCTT
ACCGAGGTTCCTAGAGGACCGGACGGACGACGATCAATTTACGGATGAGA
AGAGTTTCCTGGTGCGCCAGATCGAGCTTCTCCCCAAGGAGCCGATTGAG
CCAGCACGCTCCGCGCGCGAAGCGTCTCGCTCCGGCATCAACACGGCAGC
AGTGGCCTGAATGGCCTTCTTCTTCAACCGCGGTCGGTCCCGCCAGCCTT
CGGACATTGCCAGATCAATTAAAGAACTCTTGGTGAGGCTTCGAGAATCG
CCAACCACTGCCAAGGTCGAAGATGAGCTGGCGAAGCAACTATCTCAGAT
GAAACTTATTGTCCAGGGTACTCAAGAAATCGAGGTGTCCCCCGAACAAG
TCCAGGCATTGGTGCAGGCTACCCTGCAGGAAGACTTGCTCTACGAACTA
GCCCAAGGGCTTCATCGCCTGCCCTTCGAAGCCCGGAAAGACACACAAAC
CATCTTCTCACACATCCTCCGTTTCAAACCTGTCAATGCAAACCATGCAG
ACCCTCCTGTCATTTCCTACATTGTCCACAAACGACCCGAAATCATCATC
GAACTGTGCAAGGGCTATGAACATAGCCAAAGTGCCATGCCATGCGGCAC
TATCTTGCGAGAAGCGCTGAAGTTTGATGTTATCGCGGCGATCATCCTCT
ATGACCAGTCGGAAGACGGGGAGCCAGCGATTCGCCTGACGGAGGTCCAG
CCAGGCGTGCCTCAAGAGGGCAATGGTATATTCTGGAGGTTCTTCTACTG
GATCGACCGAGGGAGCTTCGAACTGAGTGCCGACTCTTTCACAACGTTTA
GGGAGATATTGACCCGCCATAAATCCATCGTTACGGGTTATCTAGCCACG
AACTTTGATCTCTTCTTCTCCAAATTCAACGAAGTACTTGTTCAGTCAAG
CTCGTATGTCACGAAACGACAAAGCATCAAGCTACTAGGAGAGATCCTCC
TGGACCGAACCAACTACAATGTGATGATGGCCTATGTGGAGAGTGGGGAG
AATCTCAAGTTGTGTATGAAACTGCTGCGGGACGACCGAAAGATGGTCCA
GTACGAAGGCTTCCACGTGTTCAAGGTATTTGTTGCCAACCCCAATAAAT
CGGTTGCGGTGCAGCGGATTTTGATCAACAACCGTGATCGGCTGTTGAAA
TTCTTACCGAGGTTCCTAGAGGACCGGACGGACGACGATCAATTTACGGA
TGAGAAGAGTTTCCTGGTGCGCCAGATCGAGCTTCTCCCCAAGGAGCCGA
TTGAGCCAGCACGCTCCGCGCGCGAAGCGTCTCGCTCCGGCATCAACACG
GCAGCAGTGGCCTGAATGGCCTTCTTCTTCAACCGCGGTCGGTCCCGCCA
GCCTTCGGACATTGCCAGATCAATTAAAGAACTCTTGGTGAGGCTTCGAG
AATCGCCAACCACTGCCAAGGTCGAAGATGAGCTGGCGAAGCAACTATCT
CAGATGAAACTTATTGTCCAGGGTACTCAAGAAATCGAGGTGTCCCCCGA
ACAAGTCCAGGCATTGGTGCAGGCTACCCTGCAGGAAGACTTGCTCTACG
AACTAGCCCAAGGGCTTCATCGCCTGCCCTTCGAAGCCCGGAAAGACACA
CAAACCATCTTCTCACACATCCTCCGTTTCAAACCTGTCAATGCAAACCA
TGCAGACCCTCCTGTCATTTCCTACATTGTCCACAAACGACCCGAAATCA
TCATCGAACTGTGCAAGGGCTATGAACATAGCCAAAGTGCCATGCCATGC
GGCACTATCTTGCGAGAAGCGCTGAAGTTTGATGTTATCGCGGCGATCAT
CCTCTATGACCAGTCGGAAGACGGGGAGCCAGCGATTCGCCTGACGGAGG
TCCAGCCAGGCGTGCCTCAAGAGGGCAATGGTATATTCTGGAGGTTCTTC
TACTGGATCGACCGAGGGAGCTTCGAACTGAGTGCCGACTCTTTCACAAC
GTTTAGGGAGATATTGACCCGCCATAAATCCATCGTTACGGGTTATCTAG
CCACGAACTTTGATCTCTTCTTCTCCAAATTCAACGAAGTACTTGTTCAG
TCAAGCTCGTATGTCACGAAACGACAAAGCATCAAGCTACTAGGAGAGAT
CCTCCTGGACCGAACCAACTACAATGTGATGATGGCCTATGTGGAGAGTG
GGGAGAATCTCAAGTTGTGTATGAAACTGCTGCGGGACGACCGAAAGATG
GTCCAGTACGAAGGCTTCCACGTGTTCAAGGTATTTGTTGCCAACCCCAA
TAAATCGGTTGCGGTGCAGCGGATTTTGATCAACAACCGTGATCGGCTGT
TGAAATTCTTACCGAGGTTCCTAGAGGACCGGACGGACGACGATCAATTT
ACGGATGAGAAGAGTTTCCTGGTGCGCCAGATCGAGCTTCTCCCCAAGGA
GCCGATTGAGCCAGCACGCTCCGCGCGCGAAGCGTCTCGCTCCGGCATCA
ACACGGCAGCAGTGGCCTGAATGGCCTTCTTCTTCAACCGCGGTCGGTCC
CGCCAGCCTTCGGACATTGCCAGATCAATTAAAGAACTCTTGGTGAGGCT
TCGAGAATCGCCAACCACTGCCAAGGTCGAAGATGAGCTGGCGAAGCAAC
TATCTCAGATGAAACTTATTGTCCAGGGTACTCAAGAAATCGAGGTGTCC
CCCGAACAAGTCCAGGCATTGGTGCAGGCTACCCTGCAGGAAGACTTGCT
CTACGAACTAGCCCAAGGGCTTCATCGCCTGCCCTTCGAAGCCCGGAAAG
ACACACAAACCATCTTCTCACACATCCTCCGTTTCAAACCTGTCAATGCA
AACCATGCAGACCCTCCTGTCATTTCCTACATTGTCCACAAACGACCCGA
AATCATCATCGAACTGTGCAAGGGCTATGAACATAGCCAAAGTGCCATGC
CATGCGGCACTATCTTGCGAGAAGCGCTGAAGTTTGATGTTATCGCGGCG
ATCATCCTCTATGACCAGTCGGAAGACGGGGAGCCAGCGATTCGCCTGAC
GGAGGTCCAGCCAGGCGTGCCTCAAGAGGGCAATGGTATATTCTGGAGGT
TCTTCTACTGGATCGACCGAGGGAGCTTCGAACTGAGTGCCGACTCTTTC
ACAACGTTTAGGGAGATATTGACCCGCCATAAATCCATCGTTACGGGTTA
TCTAGCCACGAACTTTGATCTCTTCTTCTCCAAATTCAACGAAGTACTTG
TTCAGTCAAGCTCGTATGTCACGAAACGACAAAGCATCAAGCTACTAGGA
GAGATCCTCCTGGACCGAACCAACTACAATGTGATGATGGCCTATGTGGA
GAGTGGGGAGAATCTCAAGTTGTGTATGAAACTGCTGCGGGACGACCGAA
AGATGGTCCAGTACGAAGGCTTCCACGTGTTCAAGGTATTTGTTGCCAAC
CCCAATAAATCGGTTGCGGTGCAGCGGATTTTGATCAACAACCGTGATCG
GCTGTTGAAATTCTTACCGAGGTTCCTAGAGGACCGGACGGACGACGATC
AATTTACGGATGAGAAGAGTTTCCTGGTGCGCCAGATCGAGCTTCTCCCC
AAGGAGCCGATTGAGCCAGCACGCTCCGCGCGCGAAGCGTCTCGCTCCGG
CATCAACACGGCAGCAGTGGCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005914-T1.utr5p1 | KJC3_005914-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005914-T1.utr3p1 | KJC3_005914-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092633QB |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | InterPro:IPR013878 |
| DBxref | PFAM:PF08569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4123412..4125549 + |
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