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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4127685..4130203+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005915-T1 ID=KJC3_005915-T1|Name=KJC3_005915-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2519bp|location=Sequence derived from alignment at ch4:4127685..4130203+ (Aspergillus niger KJC3)
ATGTCCGACTCCACCTCAACCATCCAGACCGTTCCCTACGACGACACCAT
CGCCGCCACAGCCCCGATCGCCGTTCGTTCTGCCTCATACCCTACCCCAG
TGGATTGTACTTCGTGCTCGGAGGAAAGATCGCACAGCGCATCGTCCGGT
AGTGCTTGGGATCAGTCGGGGTCCGCGCCGTCGCAACACAATGCCAGATC
GCGGCGGAACAGGTTCACTGCCTTACCAGAGGCTGGGGCCTCGACCGTGA
GCTTGCGCTCGCTGCGCAATAGCATCCCCAGTATCATTGTCAATGATACC
GCCTCCCGTCCTGCATCCCGCCCAGGATCCCGTCCTGGTTCGCGGTGGTC
GGAGCGCAGATGGGGCGGTCTGAGAAGTAAGAAGTCGGGCGAATTCGATC
GTGATGAAGATACCCCCCCTGTACCGCCGATTCAAGCTCCCTTCAATGGC
ATCGCTCTCGATATCCCGAATTCGGCTCTTGATGGCCTCGGAGCGCAATC
AATGCGTTTCTCCAAGCGCGGAAGTCTTATCAAGGAGGAATCGAAACGCC
AATTACAACAGCAAATCGAACAAGAGGAAGCAAGACGACGAGAGGCGGGC
CAACAGACCCACGATGGAGACAGTGAGCAACAACGGGTACCTGATGACAG
AGAACCGGCGTCACCTGATGTCGCTTCGTCGGAACAAAATAGCACAGAGC
CGGAGACTATTGAGACGCCATCGAGGCGGTCAAAGCCCGTCTCGACCCTC
CGAGTCAGGCACAGCGCCATGGCAAGCAGAGCCATCTCTGCAGACGAAGA
TATGTTGTCGCGACGGGTACGGCTGATGTATGAGAAGGGTGAAGAAAATG
TGACAGACTCAGAAGTAGCGAAGTCCATGGCCATGGAGAATGGCATTTTG
TGGGAAGATACCCCAACCAGTATGGAGACCTCTCGTCTTTCTGGACCCAG
TGTGTCAGTGGATACCAAAAGTGTGGTGTCGTCTCTCGGTCCAGAGAATG
GACCAACGATCAAAAGAGAGGCCCACGAGCTAGCTGGAGGCATTGAGTAC
TGGCAGAATATCAAGGCCGGAGACGTCGACCGATACGGATTCATCCGCTC
ACCAACGTCCAACTCCAACGAGGGCATTGACCCCAGTCCCATCCAGCGCG
TCTCTACCAGCCTACTTATGGCTTCTGAGACACCGCGACGGAAACACTCC
ATCCGTCCACCCTCCGCCATTGGAGGAAATCGTTCCTTTTCCGGCCTCAC
AGGCCGCTCCCCAACGCGCAAGATGTCTGAGCCTTCAATACGGCCAACCT
CCTCTCACAGCATGTATAGTACGACGATGATGCGGCGATCAACCTCGCGG
TTCCGTCGGGCCGCCAATCATCTGCCACACAATCGCGACCGCCGCGTCAA
AGATGAGGCAAGCGATATGCTCACCCACCCGACAGCTCCTCTGAATCCGG
GCGAGAAACAGGACGCAGCTGCCGCCCGCGCGGCGAGAAAGAAAGAGTGG
GAGAGAGAAGATAAATGGACAAAAATGGCCCGCCCGATGCGGAGCGGAGA
TGGCGGTGGCATGACATTCGAGTTCGACACGACAAGCTCCAAGCTGATTG
AGCGGACATGGAAAGGCATCCCTGACCGATGGCGAGCTACCGCTTGGTAC
GCCTTTTTGAAAGCCAGCGCCAGATTGCACAGTGATAGCCCTTCAGAAGA
GGAGCTAATCGAAGCGTTCAACGAGTTCCAATTGGTTTCATCGCCCGATG
ATGTCCAGATTGATATCGACGTCCCGAGAACCATCACCAGTCACATCATG
TTCCGGCGACGGTATCGCGGAGGCCAACGACTATTATTCCGAGTACTCCA
CGCAATGTCCTTGTACTTTCCAGACACGGGATACGTCCAGGGCATGGCTG
CTCTTGCTGCGACCCTCCTCGCCTACTACGACGAAGAACACGCATTTATC
ATGCTCGTACGACTGTGGCAATTACGAGGTCTGGAGCGTCTGTACCAGTC
CGGCTTTTCAGGCCTCATGGAGGCCTTGGGGGATTTTGAACGTGAGTGGC
TAGAAAAAGGAGAGGTAGCTGCCAAGCTGGTAAGTCAAACAGCATTCTCC
CATATCTCTCGGTACACCGTTTCCTAACCAGAACTTAGAATGAGCTTGGA
ATTCCTCCCACAGCATACGGCACACGGTGGTATCTGACCCTTTTCAACTA
CTCTATCCCGTTCCCCGCTCAACTCCGCGTCTGGGACGTCTTCATGCTTC
TCGGTGATGCCGAGGACCTCACGGCACCCGGCTCCTCAGGCAAAGGCAGC
AAGAAAGAGGCATCCACCAGTGCCTTTGGAAACGGACTGGATGTTCTTCA
CGCGACCTCCGCCGCCCTGATTGATGGCATGCGCGACATTATCCTTGAAT
CCGACTTCGAAAACGCCATGAAAGTCCTCACCAGCTGGGTTCCCATCAAG
GACATCGAGCTATTCATGCGTGTCGCCAAAGCAGAGTGGAAAGTGCACCG
TCGGAAAAAGGCCTCTTAG back to topCoding sequence (CDS) from alignment at ch4:4127685..4130203+ >KJC3_005915-T1 ID=KJC3_005915-T1|Name=KJC3_005915-T1|organism=Aspergillus niger KJC3|type=CDS|length=4920bp|location=Sequence derived from alignment at ch4:4127685..4130203+ (Aspergillus niger KJC3)
ATGTCCGACTCCACCTCAACCATCCAGACCGTTCCCTACGACGACACCAT
CGCCGCCACAGCCCCGATCGCCGTTCGTTCTGCCTCATACCCTACCCCAG
TGGATTGTACTTCGTGCTCGGAGGAAAGATCGCACAGCGCATCGTCCGGT
AGTGCTTGGGATCAGTCGGGGTCCGCGCCGTCGCAACACAATGCCAGATC
GCGGCGGAACAGGTTCACTGCCTTACCAGAGGCTGGGGCCTCGACCGTGA
GCTTGCGCTCGCTGCGCAATAGCATCCCCAGTATCATTGTCAATGATACC
GCCTCCCGTCCTGCATCCCGCCCAGGATCCCGTCCTGGTTCGCGGTGGTC
GGAGCGCAGATGGGGCGGTCTGAGAAGTAAGAAGTCGGGCGAATTCGATC
GTGATGAAGATACCCCCCCTGTACCGCCGATTCAAGCTCCCTTCAATGGC
ATCGCTCTCGATATCCCGAATTCGGCTCTTGATGGCCTCGGAGCGCAATC
AATGCGTTTCTCCAAGCGCGGAAGTCTTATCAAGGAGGAATCGAAACGCC
AATTACAACAGCAAATCGAACAAGAGGAAGCAAGACGACGAGAGGCGGGC
CAACAGACCCACGATGGAGACAGTGAGCAACAACGGGTACCTGATGACAG
AGAACCGGCGTCACCTGATGTCGCTTCGTCGGAACAAAATAGCACAGAGC
CGGAGACTATTGAGACGCCATCGAGGCGGTCAAAGCCCGTCTCGACCCTC
CGAGTCAGGCACAGCGCCATGGCAAGCAGAGCCATCTCTGCAGACGAAGA
TATGTTGTCGCGACGGGTACGGCTGATGTATGAGAAGGGTGAAGAAAATG
TGACAGACTCAGAAGTAGCGAAGTCCATGGCCATGGAGAATGGCATTTTG
TGGGAAGATACCCCAACCAGTATGGAGACCTCTCGTCTTTCTGGACCCAG
TGTGTCAGTGGATACCAAAAGTGTGGTGTCGTCTCTCGGTCCAGAGAATG
GACCAACGATCAAAAGAGAGGCCCACGAGCTAGCTGGAGGCATTGAGTAC
TGGCAGAATATCAAGGCCGGAGACGTCGACCGATACGGATTCATCCGCTC
ACCAACGTCCAACTCCAACGAGGGCATTGACCCCAGTCCCATCCAGCGCG
TCTCTACCAGCCTACTTATGGCTTCTGAGACACCGCGACGGAAACACTCC
ATCCGTCCACCCTCCGCCATTGGAGGAAATCGTTCCTTTTCCGGCCTCAC
AGGCCGCTCCCCAACGCGCAAGATGTCTGAGCCTTCAATACGGCCAACCT
CCTCTCACAGCATGTATAGTACGACGATGATGCGGCGATCAACCTCGCGG
TTCCGTCGGGCCGCCAATCATCTGCCACACAATCGCGACCGCCGCGTCAA
AGATGAGGCAAGCGATATGCTCACCCACCCGACAGCTCCTCTGAATCCGG
GCGAGAAACAGGACGCAGCTGCCGCCCGCGCGGCGAGAAAGAAAGAGTGG
GAGAGAGAAGATAAATGGACAAAAATGGCCCGCCCGATGCGGAGCGGAGA
TGGCGGTGGCATGACATTCGAGTTCGACACGACAAGCTCCAAGCTGATTG
AGCGGACATGGAAAGGCATCCCTGACCGATGGCGAGCTACCGCTTGGTAC
GCCTTTTTGAAAGCCAGCGCCAGATTGCACAGTGATAGCCCTTCAGAAGA
GGAGCTAATCGAAGCGTTCAACGAGTTCCAATTGGTTTCATCGCCCGATG
ATGTCCAGATTGATATCGACGTCCCGAGAACCATCACCAGTCACATCATG
TTCCGGCGACGGTATCGCGGAGGCCAACGACTATTATTCCGAGTACTCCA
CGCAATGTCCTTGTACTTTCCAGACACGGGATACGTCCAGGGCATGGCTG
CTCTTGCTGCGACCCTCCTCGCCTACTACGACGAAGAACACGCATTTATC
ATGCTCGTACGACTGTGGCAATTACGAGGTCTGGAGCGTCTGTACCAGTC
CGGCTTTTCAGGCCTCATGGAGGCCTTGGGGGATTTTGAACGTGAGTGGC
TAGAAAAAGGAGAGGTAGCTGCCAAGCTGAATGAGCTTGGAATTCCTCCC
ACAGCATACGGCACACGGTGGTATCTGACCCTTTTCAACTACTCTATCCC
GTTCCCCGCTCAACTCCGCGTCTGGGACGTCTTCATGCTTCTCGGTGATG
CCGAGGACCTCACGGCACCCGGCTCCTCAGGCAAAGGCAGCAAGAAAGAG
GCATCCACCAGTGCCTTTGGAAACGGACTGGATGTTCTTCACGCGACCTC
CGCCGCCCTGATTGATGGCATGCGCGACATTATCCTTGAATCCGACTTCG
AAAACGCCATGAAAGTCCTCACCAGCTGGGTTCCCATCAAGGACATCGAG
CTATTCATGCGTGTCGCCAAAGCAGAGTGGAAAGTGCACCGTCGGAAAAA
GGCCTCTTAGATGTCCGACTCCACCTCAACCATCCAGACCGTTCCCTACG
ACGACACCATCGCCGCCACAGCCCCGATCGCCGTTCGTTCTGCCTCATAC
CCTACCCCAGTGGATTGTACTTCGTGCTCGGAGGAAAGATCGCACAGCGC
ATCGTCCGGTAGTGCTTGGGATCAGTCGGGGTCCGCGCCGTCGCAACACA
ATGCCAGATCGCGGCGGAACAGGTTCACTGCCTTACCAGAGGCTGGGGCC
TCGACCGTGAGCTTGCGCTCGCTGCGCAATAGCATCCCCAGTATCATTGT
CAATGATACCGCCTCCCGTCCTGCATCCCGCCCAGGATCCCGTCCTGGTT
CGCGGTGGTCGGAGCGCAGATGGGGCGGTCTGAGAAGTAAGAAGTCGGGC
GAATTCGATCGTGATGAAGATACCCCCCCTGTACCGCCGATTCAAGCTCC
CTTCAATGGCATCGCTCTCGATATCCCGAATTCGGCTCTTGATGGCCTCG
GAGCGCAATCAATGCGTTTCTCCAAGCGCGGAAGTCTTATCAAGGAGGAA
TCGAAACGCCAATTACAACAGCAAATCGAACAAGAGGAAGCAAGACGACG
AGAGGCGGGCCAACAGACCCACGATGGAGACAGTGAGCAACAACGGGTAC
CTGATGACAGAGAACCGGCGTCACCTGATGTCGCTTCGTCGGAACAAAAT
AGCACAGAGCCGGAGACTATTGAGACGCCATCGAGGCGGTCAAAGCCCGT
CTCGACCCTCCGAGTCAGGCACAGCGCCATGGCAAGCAGAGCCATCTCTG
CAGACGAAGATATGTTGTCGCGACGGGTACGGCTGATGTATGAGAAGGGT
GAAGAAAATGTGACAGACTCAGAAGTAGCGAAGTCCATGGCCATGGAGAA
TGGCATTTTGTGGGAAGATACCCCAACCAGTATGGAGACCTCTCGTCTTT
CTGGACCCAGTGTGTCAGTGGATACCAAAAGTGTGGTGTCGTCTCTCGGT
CCAGAGAATGGACCAACGATCAAAAGAGAGGCCCACGAGCTAGCTGGAGG
CATTGAGTACTGGCAGAATATCAAGGCCGGAGACGTCGACCGATACGGAT
TCATCCGCTCACCAACGTCCAACTCCAACGAGGGCATTGACCCCAGTCCC
ATCCAGCGCGTCTCTACCAGCCTACTTATGGCTTCTGAGACACCGCGACG
GAAACACTCCATCCGTCCACCCTCCGCCATTGGAGGAAATCGTTCCTTTT
CCGGCCTCACAGGCCGCTCCCCAACGCGCAAGATGTCTGAGCCTTCAATA
CGGCCAACCTCCTCTCACAGCATGTATAGTACGACGATGATGCGGCGATC
AACCTCGCGGTTCCGTCGGGCCGCCAATCATCTGCCACACAATCGCGACC
GCCGCGTCAAAGATGAGGCAAGCGATATGCTCACCCACCCGACAGCTCCT
CTGAATCCGGGCGAGAAACAGGACGCAGCTGCCGCCCGCGCGGCGAGAAA
GAAAGAGTGGGAGAGAGAAGATAAATGGACAAAAATGGCCCGCCCGATGC
GGAGCGGAGATGGCGGTGGCATGACATTCGAGTTCGACACGACAAGCTCC
AAGCTGATTGAGCGGACATGGAAAGGCATCCCTGACCGATGGCGAGCTAC
CGCTTGGTACGCCTTTTTGAAAGCCAGCGCCAGATTGCACAGTGATAGCC
CTTCAGAAGAGGAGCTAATCGAAGCGTTCAACGAGTTCCAATTGGTTTCA
TCGCCCGATGATGTCCAGATTGATATCGACGTCCCGAGAACCATCACCAG
TCACATCATGTTCCGGCGACGGTATCGCGGAGGCCAACGACTATTATTCC
GAGTACTCCACGCAATGTCCTTGTACTTTCCAGACACGGGATACGTCCAG
GGCATGGCTGCTCTTGCTGCGACCCTCCTCGCCTACTACGACGAAGAACA
CGCATTTATCATGCTCGTACGACTGTGGCAATTACGAGGTCTGGAGCGTC
TGTACCAGTCCGGCTTTTCAGGCCTCATGGAGGCCTTGGGGGATTTTGAA
CGTGAGTGGCTAGAAAAAGGAGAGGTAGCTGCCAAGCTGAATGAGCTTGG
AATTCCTCCCACAGCATACGGCACACGGTGGTATCTGACCCTTTTCAACT
ACTCTATCCCGTTCCCCGCTCAACTCCGCGTCTGGGACGTCTTCATGCTT
CTCGGTGATGCCGAGGACCTCACGGCACCCGGCTCCTCAGGCAAAGGCAG
CAAGAAAGAGGCATCCACCAGTGCCTTTGGAAACGGACTGGATGTTCTTC
ACGCGACCTCCGCCGCCCTGATTGATGGCATGCGCGACATTATCCTTGAA
TCCGACTTCGAAAACGCCATGAAAGTCCTCACCAGCTGGGTTCCCATCAA
GGACATCGAGCTATTCATGCGTGTCGCCAAAGCAGAGTGGAAAGTGCACC
GTCGGAAAAAGGCCTCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035969 |
| DBxref | InterPro:IPR000195 |
| DBxref | PFAM:PF00566 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4127685..4130203 + |
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