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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4162350..4163299- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005926-T1 ID=KJC3_005926-T1|Name=KJC3_005926-T1|organism=Aspergillus niger KJC3|type=mRNA|length=950bp|location=Sequence derived from alignment at ch4:4162350..4163299- (Aspergillus niger KJC3)
TACTACGCTGATTATTGCCTTCATGAGCCGGATTCGTTTTACCACTCGAT
AGTATCAGCTACTGGATGTCATGCCACTCTACGAAGTAGGAATGACGGAT
ATAAATTCAGGTCTTTTCCCGGGTTGATATGACAGTCTTCCCTTCATTCT
TCAAACACATCACATCATTCTCTCTTCCAAATTACAATTGTCACGTTCTC
CTTCTTCCCAAACTAGAACAAAACATGGCTCCCCAGAAGCAATTGGTCCT
TAAGCTGACCTCCTTTCGCTACAAGAAGGAGGGTATCTCTTGGAAGGACT
TCCATGAATACGGAACCAGACAGCATGCACCTAAGGCTGCCCGTATCCAG
GAAAGACATGGCGCCTACAAGATTACGCACGTAAGTGCCCTGTCGATTGT
TGCTTACATATCTCTCCCCCTCTTCAATTGACTAAAAACTCTTTCCCTTG
CTAGGTGTACACTCCCCCTATCACCAAGAGTCTGATCACCGACAAAATCC
CGTGGGCTGTCCGTCCCGGTTGGATTGTCGACGACCACGACGTTTCGGTG
TCGATGTACGTGCCTGACCCCGAAACTCTGCAGGCAATCGTCACAGATCC
GGAATTCCAGAGCCTTGTCGCAGGAGAGGACCATATTCTGGATCAGGAGC
GGGCCACAGTCACCGCGGGCTGGGAGGAGGTCTTTGTGGATGAGGGCAAA
ATTGTGGACATTGACCGCGAGAGCTGGGAGGCTTTTACGGCCATGGGTCA
GGGTAGCAAGAAGACTGATGCTCCCGAGGATGTTCGTATCTGAAACGAGC
TACTCTACAGGGTGGGCTCTCGTCCGGCTGCTTAGATCTAGCTGTTAGTG
AATAGCATCAAGTGAATGTCATTATTGTTTGGTAAAACGAAGTTGACTAA
TCTATAACAAAAAAACAGAAAAGAATTCAGTACAAATCCCAATTAGTACA
back to topCoding sequence (CDS) from alignment at ch4:4162350..4163299- >KJC3_005926-T1 ID=KJC3_005926-T1|Name=KJC3_005926-T1|organism=Aspergillus niger KJC3|type=CDS|length=1182bp|location=Sequence derived from alignment at ch4:4162350..4163299- (Aspergillus niger KJC3)
GTGTACACTCCCCCTATCACCAAGAGTCTGATCACCGACAAAATCCCGTG
GGCTGTCCGTCCCGGTTGGATTGTCGACGACCACGACGTTTCGGTGTCGA
TGTACGTGCCTGACCCCGAAACTCTGCAGGCAATCGTCACAGATCCGGAA
TTCCAGAGCCTTGTCGCAGGAGAGGACCATATTCTGGATCAGGAGCGGGC
CACAGTCACCGCGGGCTGGGAGGAGGTCTTTGTGGATGAGGGCAAAATTG
TGGACATTGACCGCGAGAGCTGGGAGGCTTTTACGGCCATGGGTCAGGGT
AGCAAGAAGACTGATGCTCCCGAGGATGTTCGTATCTGAATGACAGTCTT
CCCTTCATTCTTCAAACACATCACATCATTCTCTCTTCCAAATTACAATT
GTCACGTTCTCCTTCTTCCCAAACTAGAACAAAACATGGCTCCCCAGAAG
CAATTGGTCCTTAAGCTGACCTCCTTTCGCTACAAGAAGGAGGGTATCTC
TTGGAAGGACTTCCATGAATACGGAACCAGACAGCATGCACCTAAGGCTG
CCCGTATCCAGGAAAGACATGGCGCCTACAAGATTACGCACGTGTACACT
CCCCCTATCACCAAGAGTCTGATCACCGACAAAATCCCGTGGGCTGTCCG
TCCCGGTTGGATTGTCGACGACCACGACGTTTCGGTGTCGATGTACGTGC
CTGACCCCGAAACTCTGCAGGCAATCGTCACAGATCCGGAATTCCAGAGC
CTTGTCGCAGGAGAGGACCATATTCTGGATCAGGAGCGGGCCACAGTCAC
CGCGGGCTGGGAGGAGGTCTTTGTGGATGAGGGCAAAATTGTGGACATTG
ACCGCGAGAGCTGGGAGGCTTTTACGGCCATGGGTCAGGGTAGCAAGAAG
ACTGATGCTCCCGAGGATGTTCGTATCTGAATGACAGTCTTCCCTTCATT
CTTCAAACACATCACATCATTCTCTCTTCCAAATTACAATTGTCACGTTC
TCCTTCTTCCCAAACTAGAACAAAACATGGCTCCCCAGAAGCAATTGGTC
CTTAAGCTGACCTCCTTTCGCTACAAGAAGGAGGGTATCTCTTGGAAGGA
CTTCCATGAATACGGAACCAGACAGCATGCACCTAAGGCTGCCCGTATCC
AGGAAAGACATGGCGCCTACAAGATTACGCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005926-T1.utr3p1 | KJC3_005926-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005926-T1.utr5p1 | KJC3_005926-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.10 |
| Note | antiSMASH:Cluster_4.9 |
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR009799 |
| DBxref | PFAM:PF07110 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4162350..4163299 - |
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