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KJC3_005928-T2, KJC3_005928-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005928-T2
Unique NameKJC3_005928-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4176338..4177725-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005928-T2 ID=KJC3_005928-T2|Name=KJC3_005928-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1388bp|location=Sequence derived from alignment at ch4:4176338..4177725- (Aspergillus niger KJC3)
CTCATCACCGCCCTCAAGTGAACAAACTCACTAACCAATTCACTAACGAG
CCTAGACTGAAACGCCCGCATCGCTACGGATTTACAGGGGCTACGGGTAA
ATAATAGCTTGCGCAATGAAATTCAGAATTATTATTATTATTACTACTAT
TCCCAGCTCCGAAATGTTGTCCCCTTTCCTCAGCTCCAGTCATCATCACA
AGGATACGCCGGTCTTGAACCTTATTCCGAGCTGACTGACGCCTACGATT
TACGTGGTTGTTTTGGTGAGATGAGTCGCATGCAGAACGGCCACATACCA
ATTCCCCTGAAGAGGCCAAGGTCAGTCAGTCAGCTTAAGTCTTACTTTCA
TTTTATTTTACTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCTGATTAGCC
ACTCAGAAGATTTATCTGGTGCGCTTATCTGCTTTACTACTCCAATCAAT
TCAACCCAATCACTTTTACCCCAAGATTGTCATTTCCGCTATGCAGGGAT
TGATTGGTAGCCAATCCATCCCGACCCTGCATACGGGGAATGTACCCAAT
AGCATTACTACTACTACTACTACTACTACATCCCTATACCACCTACCTAC
GTATAATTAATTGTACTACCATCAGCTGACACTTAATCCACCGCGACTCA
GCGAAGAAGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCAGAAG
TACAACTACAACCACCGCTACCGCAACAATAGCAGCAGCAGCAGCAGCAG
CAGTCCAACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGGG
GGTATAGGCAACACGACGATGATGACGATGACGATGACACGGAGATTCTG
AGCAATGCTAGTGGTGATGATAGCATTAATAGTAATGGACGACCAAAGTC
AAGGGTGGTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTGT
CATTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTGTATGTGT
ATCACACATCATTCCCATGATTGGGGATTTTTTGTTTGGTTTCTTCACAC
TCTTAACTCTACGGTTACTAATCATGTCGGGTTTGTGTGCAGATGAACCG
TCTAACAGTAATCCGTTTCCGGGCCGTCATCGGTGAGTGCATTAATATCC
CTACCTATCTATTTACACAATTGATAAAGGGGGATGCGCATATCGGGCTG
ATACACGGAACAATGGACGACACGGGAATCTTACAGTTGAAGACATGATC
GATCCTACATTACACCTGGCTGGAAGACGCCCGGAGTAGTAGATTATTCA
ACACCGGCTTTTATACATGTTTCTCTCAGGAGAGAGAGAAAGGATTGATG
TACATACCATTCTTAAATATAATGCACAAAGAAGCAGA
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Coding sequence (CDS) from alignment at ch4:4176338..4177725-

>KJC3_005928-T2 ID=KJC3_005928-T2|Name=KJC3_005928-T2|organism=Aspergillus niger KJC3|type=CDS|length=1740bp|location=Sequence derived from alignment at ch4:4176338..4177725- (Aspergillus niger KJC3)
TTGAATGAACCGTCTAACAGTAATCCGTTTCCGGGCCGTCATCGCGAAGA
AGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCAGAAGTACAACT
ACAACCACCGCTACCGCAACAATAGCAGCAGCAGCAGCAGCAGCAGTCCA
ACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGGGGGTATAG
GCAACACGACGATGATGACGATGACGATGACACGGAGATTCTGAGCAATG
CTAGTGGTGATGATAGCATTAATAGTAATGGACGACCAAAGTCAAGGGTG
GTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTGTCATTCTT
CTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTATGAGTCGCATGCAG
AACGGCCACATACCAATTCCCCTGAAGAGGCCAAGTTGAATGAACCGTCT
AACAGTAATCCGTTTCCGGGCCGTCATCGCGAAGAAGAAGAAGATTCCAT
TGATTCGGAAAATACTACGGTGCAGAAGTACAACTACAACCACCGCTACC
GCAACAATAGCAGCAGCAGCAGCAGCAGCAGTCCAACTAATCACCCTCCC
GATATTGAGAAATGTCAGCCCTACCGGGGGTATAGGCAACACGACGATGA
TGACGATGACGATGACACGGAGATTCTGAGCAATGCTAGTGGTGATGATA
GCATTAATAGTAATGGACGACCAAAGTCAAGGGTGGTGATGCTCTACGCG
GCATGTTATGTCGCATTCGCCATCCTGTCATTCTTCTCCGCCGCTTATTA
CTTTTTGTGCTGGATGCCGTATGAGTCGCATGCAGAACGGCCACATACCA
ATTCCCCTGAAGAGGCCAAGTTGAATGAACCGTCTAACAGTAATCCGTTT
CCGGGCCGTCATCGCGAAGAAGAAGAAGATTCCATTGATTCGGAAAATAC
TACGGTGCAGAAGTACAACTACAACCACCGCTACCGCAACAATAGCAGCA
GCAGCAGCAGCAGCAGTCCAACTAATCACCCTCCCGATATTGAGAAATGT
CAGCCCTACCGGGGGTATAGGCAACACGACGATGATGACGATGACGATGA
CACGGAGATTCTGAGCAATGCTAGTGGTGATGATAGCATTAATAGTAATG
GACGACCAAAGTCAAGGGTGGTGATGCTCTACGCGGCATGTTATGTCGCA
TTCGCCATCCTGTCATTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGAT
GCCGTATGAGTCGCATGCAGAACGGCCACATACCAATTCCCCTGAAGAGG
CCAAGTTGAATGAACCGTCTAACAGTAATCCGTTTCCGGGCCGTCATCGC
GAAGAAGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCAGAAGTA
CAACTACAACCACCGCTACCGCAACAATAGCAGCAGCAGCAGCAGCAGCA
GTCCAACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGGGGG
TATAGGCAACACGACGATGATGACGATGACGATGACACGGAGATTCTGAG
CAATGCTAGTGGTGATGATAGCATTAATAGTAATGGACGACCAAAGTCAA
GGGTGGTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTGTCA
TTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTATGAGTCGCA
TGCAGAACGGCCACATACCAATTCCCCTGAAGAGGCCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005928KJC3_005928Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005928-T2KJC3_005928-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005928-T2.cdsKJC3_005928-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005928-T2.utr3p1KJC3_005928-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005928-T2.exon4KJC3_005928-T2.exon4Aspergillus niger KJC3exon
KJC3_005928-T2.exon3KJC3_005928-T2.exon3Aspergillus niger KJC3exon
KJC3_005928-T2.exon2KJC3_005928-T2.exon2Aspergillus niger KJC3exon
KJC3_005928-T2.exon1KJC3_005928-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005928-T2.utr5p1KJC3_005928-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.10
NoteantiSMASH:Cluster_4.9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4176338..4177725 -
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