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KJC3_005932-T1, KJC3_005932-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005932-T1
Unique NameKJC3_005932-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4188368..4189905-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005932-T1 ID=KJC3_005932-T1|Name=KJC3_005932-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1538bp|location=Sequence derived from alignment at ch4:4188368..4189905- (Aspergillus niger KJC3)
CATCACCACATCGCTTTACACGCGGCCTGTCCCTGCCCTGTCACTCTTCC
TTTCGGCTGTTTTCATAGTTTCACTCCATCTTCTATCGCCCGCAAGGTCG
CCAAATCTGTCAAGATGGCCACCGAACTTTGGTACGTAATCACCTCACCT
ACTCCTTTTCCCAGCATCCCAACCATTGTGCCCTCTTGTATCTCGACTTT
AATAATGTTACGGATGATTCTCGACTTGATATACTGACATATGGACTTGA
TAGCCCCGTTTACGCAGTAAGTCACTTGTGATCCCACCCTCACCGATGAC
ACCATCGAGCTCCAAGCGACCCTCAAGGTAGCTTGGCTTCGTTGCATCAA
GCGGAGAATCTGCCATCGAACAAGCATCTCTCGACACGGTTAACTGATCT
CCAACTTGTATAGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCG
TCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGT
GTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGAGTACGTG
GAAGCTTCACAGAGCTTTATACCACTGGGATATGCCATCGCATATAATTT
CGGATGATGTGATACTAATCTCGTGATACAGACATTGTCCCCATTGTCAT
GGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAA
ACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGA
GCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGGTAAGCTTCTCA
ACATGGCACCTTTCAGTTCCGGTAAGCTTGGGACTAATTCAGTATCTCTA
GTTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAA
CAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGT
CTTGGGTGAGTCACAACAACATAGCGATATAATTGGTCTGCCCCATCTAA
CAAGGATGTTTTACAGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAA
CTCCCGTTCGAGGATCGACGCCACTTGCTAAACGAACCCTCCTTCGTTCC
GCGCGAAATGGCCCAAGTGAACACCCGCCCGAGGATGCCAACCACCCTAT
ATCCTCGGATATGATGAACAGAGCCCGGGTTGCTCAACATGTGTTAACGT
GATGCGGTTATTTTGACTTGTGTTTTCAGACTTTATTTGCCGACAATGAC
GGTTCCCGTCATTGTCCCGATGACAGCTGGAGGGGATGGGGAGAAGTGGA
TTGCTGGGGGGATTGGAAAGAGAAAACGGACGTTATATAACATATGCTTT
CTCTTTCATCCAACCACCCCCCCAAATAACAAAGGACAAGACATAATTGG
ATGTGCTAGCCAAGTTTGTAGACTAGGACAAGGTGGGAAGCTGTGGTAGA
TACATTGCATGGTTTTTGAAGGTCTTTTGAAATTATGTACTTTATGGGAG
TCGCTTACTCTTTTGTATCCTTGAGCTGGATCATAGGA
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Coding sequence (CDS) from alignment at ch4:4188368..4189905-

>KJC3_005932-T1 ID=KJC3_005932-T1|Name=KJC3_005932-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch4:4188368..4189905- (Aspergillus niger KJC3)
GTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATC
GACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCC
GTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTC
ATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCAT
TGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGAC
AGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCC
GTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGC
ACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAA
GGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCG
TCAAGACCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTT
ATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTA
ATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAA
CAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGT
CTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTC
TGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTG
TACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGG
TATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGT
CTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTG
TCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTT
ACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTTATCGTTGCTCTTCT
GATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATTGGT
ATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTA
TGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCC
CCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTC
CTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCAT
TCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCC
CTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCG
GAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCC
GTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTTACGCAATGGCCACC
GAACTTTGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTT
CGAGGATCGACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGC
AGGTGTCCGTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTT
TGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCG
GGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGA
TTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAG
GTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCC
TTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGA
ACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGA
CCTGATCGTCAAGACCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGT
ACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCC
ACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAA
CTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTC
GCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTAT
CTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGG
TCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGT
TTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCG
GCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGG
TGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGA
CCCCGTTTACGCAATGGCCACCGAACTTTGGTCTGTACGGTCTTATCGTT
GCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTG
CCATTGGTATCGTTGGTGACGCAGGTGTCCGTGGAACTGCTCAACAGCCC
CGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGA
CATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCG
TGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACT
GGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGC
AGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCAC
CTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTG
GAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGACCCCGTTTACGCAA
TGGCCACCGAACTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA3_1KJC3_005932Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005932-T1KJC3_005932-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005932-T1.cdsKJC3_005932-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005932-T1.utr3p1KJC3_005932-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005932-T1.exon6KJC3_005932-T1.exon6Aspergillus niger KJC3exon
KJC3_005932-T1.exon5KJC3_005932-T1.exon5Aspergillus niger KJC3exon
KJC3_005932-T1.exon4KJC3_005932-T1.exon4Aspergillus niger KJC3exon
KJC3_005932-T1.exon3KJC3_005932-T1.exon3Aspergillus niger KJC3exon
KJC3_005932-T1.exon2KJC3_005932-T1.exon2Aspergillus niger KJC3exon
KJC3_005932-T1.exon1KJC3_005932-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005932-T1.utr5p1KJC3_005932-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.10
NoteantiSMASH:Cluster_4.9
DBxrefInterPro:IPR035921
DBxrefInterPro:IPR002379
DBxrefInterPro:IPR011555
DBxrefInterPro:IPR000245
DBxrefPFAM:PF00137
ProductH( )-transporting V0 sector ATPase subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4188368..4189905 -
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