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KJC3_005937-T1, KJC3_005937-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005937-T1
Unique NameKJC3_005937-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4204075..4206762+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005937-T1 ID=KJC3_005937-T1|Name=KJC3_005937-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2688bp|location=Sequence derived from alignment at ch4:4204075..4206762+ (Aspergillus niger KJC3)
GAATAATGCTTGTAGTCAGAGAGCTTGAATCGCCCAAATTGACTGGCGAG
GCTGATAGGCCCTCTGGGAGCTGCAGGTGCTTGTTTGCATGGTTTGCATG
AGAGCATTCCGATCCGCAGCTTCGCTTCAGCTTCGTATCTCGGACCTGGC
TTAACTCCAGGAGGACTTCCTCCTCGCCCCATGTCAAATTGTCGAGTCTC
CTTCCTAGCCGGATAGCATAATATAACTACACCAGACCTGAAGTGAACTC
GATCAAAAGGGCACTGCCGTTCGCACAGATCTTTGTCCTCACGACACTGG
CTGGCTCCTTGCCCATGGCAGGCATAATCTCTGGACGAAACAGATGTGCT
CAAAGCTCATATAAGACCGCCTAATCGACTTCTCTCAGTGCTGTATCGGA
TTTGTAACTGATATTGTGGCTGACACCGCAGCTCCAAGCAACTTCTTTCA
GTTTGTCTATATGTTTAGTACATGCTGCGAAGCAATGCGAGGCATGAGTG
ATATCTTTGTATACCTGCTATATACTCATTTCTTTATCTACACCTGACTT
TTGTTTCTTTACTGAACAACTTCCTCTCTCTTCTATCACAATGTTTGCAC
CACTCGGTCTATTCAAGGATATACCTTGTCCTGAAGGGCAAAATTGCTTG
CTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCCTCCACATCAGCCTC
CCAAGGAGGCCGTCAGAACACTCATATACCAAGAACAGTCAAGAACGAGA
TAGGAGCAACATCAGGCGAAACAGCTGTCGAACCCAAAGCACATGTTCCG
GGTGACGAGAAAAAGGCCAAGGCAATTGGCAAGCCGGCATCTTCGCCCGC
TAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGCTCCGTCGAACAAGC
CATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTCAGTCCTTATTAAGG
GAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCAGCCAAAGCAAGCGC
TCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGCACCGCGAGAAAGCC
TAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCCATGGTGTGCGTCTG
GCCATCCTCACCAAGCTGCATGCCGGTATGTCTGCTCTAAATGACAAGTT
GGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGTTCTCACGCCGAATG
AGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGACCGCCAAAGAGAAT
CCAAGCATATACTCCAATGTCATCAAGCTCCGTATAGTAAAGCTCTCAAA
AATGAGCAAGGAAGAATGGGCCAATGACGTCAAAACCCACCTTAATGAGC
GTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAAAACCGAAACCTCTT
GACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTGGCGAGCAAGCTTGT
GACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGTTACTAAACCTCCGA
CGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTATTGAATCCAAGGGA
TGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAAGTCTTCCCTGGTCG
TCGGGAGGATGGAACCTTGACGACTGGAGGGCAATGCACATATCACCCGG
GCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATCACATCACGGGGCAC
AAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTGGGAACTTCTGCTGG
CTGTACCAAGGGCAAGACCCATGTATTCAAGGTATCGGAAACCAAACGAC
TCGCATCAGTACTCCAGTTTCAGAAAACCCCGGAACAACCAGAGAAGGGG
CGACTCCCACCAGTTTGCTTCGACTGTGAAATGGGTTACACGACACTGGG
ATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCCTCAAGGCAAGACGC
TCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGTTGGATTTGAATTCC
CGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAGGCCATTCCCTATGG
GAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGACGGGGAAGTGGACT
CGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGCAGCCCGGGCGCTTCTA
TTTGAATGTCTTCAACCAGATACGCCACTCATTGGTCATGCGATCGATAA
TGACCTCAATGCGTGCCGCATCATTCATCCGACAATCATTGATACTGTGC
TCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTATGAGCTTGAAGACT
CTATGTCGAAGACACCTAGATCGAGACATCCAAACGGGAGGCAGCAGCGG
CCATGACTCAAAGGAAGACTCGATCGCTACGGGTGATCTGGTGAGGGTCA
AGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAGGCTGGCGCATACAT
AACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCGGAAGCTGCTGCAGC
ACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCGGGCAAGCTCGGCGT
TGGGAGATTGACGGCACGATTGTCGATGACATCGATTAGTACATTTAGTG
ATACCCAGTTTACGCGTACTCAAATTGTACAACATCCGACTACGTAATTT
ACAACGGAACAACATTAGGTTCGAGTGATAGATTGCTC
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Coding sequence (CDS) from alignment at ch4:4204075..4206762+

>KJC3_005937-T1 ID=KJC3_005937-T1|Name=KJC3_005937-T1|organism=Aspergillus niger KJC3|type=CDS|length=1971bp|location=Sequence derived from alignment at ch4:4204075..4206762+ (Aspergillus niger KJC3)
ATGTTTGCACCACTCGGTCTATTCAAGGATATACCTTGTCCTGAAGGGCA
AAATTGCTTGCTCTTGACCTGCATCTTCTCTCACCGGGACGTCGCCTCCA
CATCAGCCTCCCAAGGAGGCCGTCAGAACACTCATATACCAAGAACAGTC
AAGAACGAGATAGGAGCAACATCAGGCGAAACAGCTGTCGAACCCAAAGC
ACATGTTCCGGGTGACGAGAAAAAGGCCAAGGCAATTGGCAAGCCGGCAT
CTTCGCCCGCTAAAGAGGCACTCAGTCAAGGTTCTGTGTCAAAAGCTCCG
TCGAACAAGCCATCCCAATTCAATGGCCAAGCCAACGTCAAGCTTCAGTC
CTTATTAAGGGAAGTTACGCCTCCAGCAAAGCCAACGTCTACATCAGCCA
AAGCAAGCGCTCCCGGCTCTCGAAAATCTCTCCCACCAAGGCAAGCACCG
CGAGAAAGCCTAAACCCTCGGATGCTGACGAAAGCACCCGCGCCCCATGG
TGTGCGTCTGGCCATCCTCACCAAGCTGCATGCCGGTATGTCTGCTCTAA
ATGACAAGTTGGCCAAAGACAAAGAAAGCCAGGACAAATATCTTGTTCTC
ACGCCGAATGAGCTTATCACAATGGCCTTGGATGAAGAGGAAAAGACCGC
CAAAGAGAATCCAAGCATATACTCCAATGTCATCAAGCTCCGTATAGTAA
AGCTCTCAAAAATGAGCAAGGAAGAATGGGCCAATGACGTCAAAACCCAC
CTTAATGAGCGTTATTACAAGATTGCGCCCGGGCCAGAACAGTCAAAACC
GAAACCTCTTGACACTGGGCTTAGTGCAAAGGAAGAGATAGCATTGGCGA
GCAAGCTTGTGACACGTCTGGAAGGTCTCGAGCAGTACGGCTACGTTACT
AAACCTCCGACGGACGCTGAAGTGGAAGGTGCCAGGAAAGGTGTTATTGA
ATCCAAGGGATGGGAAAAGTGCGATCGGTGTGGAGGCAGGTTCCAAGTCT
TCCCTGGTCGTCGGGAGGATGGAACCTTGACGACTGGAGGGCAATGCACA
TATCACCCGGGCAAACCTCTCTATCCGCCCAAGAAGAAGACCGATCACAT
CACGGGGCACAAAGATGCATACTTCTCGTGCTGCAACGAGTCAGTGGGAA
CTTCTGCTGGCTGTACCAAGGGCAAGACCCATGTATTCAAGGTATCGGAA
ACCAAACGACTCGCATCAGTACTCCAGTTTCAGAAAACCCCGGAACAACC
AGAGAAGGGGCGACTCCCACCAGTTTGCTTCGACTGTGAAATGGGTTACA
CGACACTGGGATTGGAACTGATTCGGTTAACCGCTGTTAGCTGGCCTCAA
GGCAAGACGCTCTTGGATATCTTGGTCAGACCCATCGGTGAAGTGTTGGA
TTTGAATTCCCGGTTTTCTGGTGTTTTCCCAGAGCACTACACGAAGGCCA
TTCCCTATGGGAGCTCTGGCTCTCAGACGATTTCACAGTTGGAGGACGGG
GAAGTGGACTCGCCTCCATTGCAGATTGTCGAGTCGCCTGCTGCAGCCCG
GGCGCTTCTATTTGAATGTCTTCAACCAGATACGCCACTCATTGGTCATG
CGATCGATAATGACCTCAATGCGTGCCGCATCATTCATCCGACAATCATT
GATACTGTGCTCCTCTACCCACATCCCCGGGGCTTACCTCTCCGTATGAG
CTTGAAGACTCTATGTCGAAGACACCTAGATCGAGACATCCAAACGGGAG
GCAGCAGCGGCCATGACTCAAAGGAAGACTCGATCGCTACGGGTGATCTG
GTGAGGGTCAAGGCAGCAGAGACGTGGAAGGTCCTCAAGTCTAAAGGCTG
GCGCATACATAACGACCAGCTTGTGCCTCCACCAGGCGCCGATGCGGAAG
CTGCTGCAGCACATGGAAGGCTTGGATCGGGAGCGGGTCAAAAGCGGGCA
AGCTCGGCGTTGGGAGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
REX3KJC3_005937Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005937-T1.utr5p1KJC3_005937-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005937-T1.exon1KJC3_005937-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005937-T1.cdsKJC3_005937-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005937-T1.utr3p1KJC3_005937-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005937-T1KJC3_005937-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR034922
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR013520
ProductRNA exonuclease 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4204075..4206762 +
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