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KJC3_005941-T1, KJC3_005941-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005941-T1
Unique NameKJC3_005941-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4211280..4212247-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005941-T1 ID=KJC3_005941-T1|Name=KJC3_005941-T1|organism=Aspergillus niger KJC3|type=mRNA|length=968bp|location=Sequence derived from alignment at ch4:4211280..4212247- (Aspergillus niger KJC3)
GGTAATGCGCCTACCACGATTATTGACTGCCGGCCCCCCTCTTCTCTCTT
CTTAGCCGCCGATGCGTTTGTCATCGATCATCCCATTCACTGATTTATCA
TCCCCAAGGTCGAGACTCGCCTCGTCAACTACATATCTAGTGGCGCATTC
CCTGGTACCAGTACGATTCATCAGAACTACTGCTCCTACTGGTCCATATC
ACCTTGCGACATCACTGCGATCAAGCCATCGGAACATTTTTCCTCTCCAG
CGCATTTACTCACCACCATCACTTCCATCGTCGCATTCCCCAAGACTAAG
ACTACTATCAACCATGTCTTCCGCAACGTCCTTCTACGACTTTGAGCCTG
TCGATAGTACGTTATTCGCCCTTCTTCACTTGCTTTTTAAATGCCATACC
CCCACTTCATTTCCAACTAACCACCCCTCTCACCCGCACAGAAAAGGGCT
CCCCCTTCCCCCTCATCGACCTCAAGGGCAAAGTCGTCCTCGTCGTCAAC
ACCGCCTCTAAGTGCGGCTTCACGCCTCAGTTCCAAGGCCTGGAGAAACT
CTACCAAGACATCAAAGCCAAGCACCCGGAAGACTTCACCATCATCGGAT
TCCCCTGCAACCAGTTCGGAAGCCAGGACCCCGGTTCCGACGACGAGATC
CAGTCGTTCTGCCAGATCAACTACGGAGTGACGTTCCCTGTGCTGGGCAA
GTCGGACGTTAATGGCGATAAGGCCGCGCCGGTGTGGACATGGATGAAGG
AGCAGCAGCCCGGTCTGTTGGGGCTGAAGCGCATCAAGTGGAACTTTGAG
AAGTTCTTGATTTCGGCGGATGGAAAGGTTGTGGGTCGCTGGGCTAGTTT
GACCAAGCCCGAGTCCTTGGAGGAGCCCATTCTGAAGGAGATTGAGAAGG
CGAAGAAGGAGGGCTCGTTGGCTTCGTTGAAGAAGGAGGAGGCCAAGGCT
GAGGAGGCGACGGCTTAG
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Coding sequence (CDS) from alignment at ch4:4211280..4212247-

>KJC3_005941-T1 ID=KJC3_005941-T1|Name=KJC3_005941-T1|organism=Aspergillus niger KJC3|type=CDS|length=1644bp|location=Sequence derived from alignment at ch4:4211280..4212247- (Aspergillus niger KJC3)
AAAAGGGCTCCCCCTTCCCCCTCATCGACCTCAAGGGCAAAGTCGTCCTC
GTCGTCAACACCGCCTCTAAGTGCGGCTTCACGCCTCAGTTCCAAGGCCT
GGAGAAACTCTACCAAGACATCAAAGCCAAGCACCCGGAAGACTTCACCA
TCATCGGATTCCCCTGCAACCAGTTCGGAAGCCAGGACCCCGGTTCCGAC
GACGAGATCCAGTCGTTCTGCCAGATCAACTACGGAGTGACGTTCCCTGT
GCTGGGCAAGTCGGACGTTAATGGCGATAAGGCCGCGCCGGTGTGGACAT
GGATGAAGGAGCAGCAGCCCGGTCTGTTGGGGCTGAAGCGCATCAAGTGG
AACTTTGAGAAGTTCTTGATTTCGGCGGATGGAAAGGTTGTGGGTCGCTG
GGCTAGTTTGACCAAGCCCGAGTCCTTGGAGGAGCCCATTCTGAAGGAGA
TTGAGAAGGCGAAGAAGGAGGGCTCGTTGGCTTCGTTGAAGAAGGAGGAG
GCCAAGGCTGAGGAGGCGACGGCTTAGATGCGTTTGTCATCGATCATCCC
ATTCACTGATTTATCATCCCCAAGGTCGAGACTCGCCTCGTCAACTACAT
ATCTAGTGGCGCATTCCCTGGTACCAGTACGATTCATCAGAACTACTGCT
CCTACTGGTCCATATCACCTTGCGACATCACTGCGATCAAGCCATCGGAA
CATTTTTCCTCTCCAGCGCATTTACTCACCACCATCACTTCCATCGTCGC
ATTCCCCAAGACTAAGACTACTATCAACCATGTCTTCCGCAACGTCCTTC
TACGACTTTGAGCCTGTCGATAAAAAGGGCTCCCCCTTCCCCCTCATCGA
CCTCAAGGGCAAAGTCGTCCTCGTCGTCAACACCGCCTCTAAGTGCGGCT
TCACGCCTCAGTTCCAAGGCCTGGAGAAACTCTACCAAGACATCAAAGCC
AAGCACCCGGAAGACTTCACCATCATCGGATTCCCCTGCAACCAGTTCGG
AAGCCAGGACCCCGGTTCCGACGACGAGATCCAGTCGTTCTGCCAGATCA
ACTACGGAGTGACGTTCCCTGTGCTGGGCAAGTCGGACGTTAATGGCGAT
AAGGCCGCGCCGGTGTGGACATGGATGAAGGAGCAGCAGCCCGGTCTGTT
GGGGCTGAAGCGCATCAAGTGGAACTTTGAGAAGTTCTTGATTTCGGCGG
ATGGAAAGGTTGTGGGTCGCTGGGCTAGTTTGACCAAGCCCGAGTCCTTG
GAGGAGCCCATTCTGAAGGAGATTGAGAAGGCGAAGAAGGAGGGCTCGTT
GGCTTCGTTGAAGAAGGAGGAGGCCAAGGCTGAGGAGGCGACGGCTTAGA
TGCGTTTGTCATCGATCATCCCATTCACTGATTTATCATCCCCAAGGTCG
AGACTCGCCTCGTCAACTACATATCTAGTGGCGCATTCCCTGGTACCAGT
ACGATTCATCAGAACTACTGCTCCTACTGGTCCATATCACCTTGCGACAT
CACTGCGATCAAGCCATCGGAACATTTTTCCTCTCCAGCGCATTTACTCA
CCACCATCACTTCCATCGTCGCATTCCCCAAGACTAAGACTACTATCAAC
CATGTCTTCCGCAACGTCCTTCTACGACTTTGAGCCTGTCGATA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006979response to oxidative stress
Vocabulary: Molecular Function
TermDefinition
GO:0004602glutathione peroxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HYR1KJC3_005941Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005941-T1KJC3_005941-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005941-T1.cdsKJC3_005941-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005941-T1.exon2KJC3_005941-T1.exon2Aspergillus niger KJC3exon
KJC3_005941-T1.exon1KJC3_005941-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005941-T1.utr5p1KJC3_005941-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029759
DBxrefInterPro:IPR029760
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR000889
DBxrefPFAM:PF00255
Productperoxiredoxin hyr1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4211280..4212247 -
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