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KJC3_005956-T1, KJC3_005956-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005956-T1
Unique NameKJC3_005956-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4240613..4242320+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005956-T1 ID=KJC3_005956-T1|Name=KJC3_005956-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1708bp|location=Sequence derived from alignment at ch4:4240613..4242320+ (Aspergillus niger KJC3)
ATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAACC
AAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCTCG
GGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCT
TATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCC
TGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTT
ATCGTTGGTATGCCATTTCCCCTCGTTTCACAGCTTAGTTAATATGTACT
AAAGGGGAAATGCAGGCAACATTTCTATCAGGACCCTACTACGCTGAAGA
AAATGCCAAAGGCCATGTACGTCCCCGTCTATGGCTCCAACGCTGTGCGA
TCTGACACGGCAACAGGCGCGAGTATTACGAGCGCAACAACGATCTGATA
TCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCG
TCTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAA
CCAACGGCCGGGCATATGACGCAACCTCCTACGGCACAGGAGATACCAAA
GCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAG
CGAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAG
CATCACCCCCAGACATCATCCCCACAAACGATGAGTTCGTCGACAGCAGC
GACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCT
CCTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCG
TCCTGGCCAGCTTAGTCGACGGGGCACTGGACTTCCTCAGCACAGCCATA
GTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCC
GATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCG
TAATGGTGACATCTTTCGTCCAAGTCGCACTCACATCCTTCACACGCCTC
ATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGT
CATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGAC
TGATTAAGAACTCGAGCGTCCAAGCACTAGCACAAGACGCCATGACGGAC
GTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCAGTAAGTTCTTCCT
GCCCTCACCCTAACTTCTCTCAACCCAAACCACACCACTAACCAATACAA
CAAAAAGTCGGCTCCCTGACCACAACCTGGTACATCGACCCGTTAGGCGG
TCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAGCG
AACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGT
ATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTCAAGATCCA
AGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATA
TTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAG
AGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGGGCATTCGT
GCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAGATTG
AGGGGTGA
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Coding sequence (CDS) from alignment at ch4:4240613..4242320+

>KJC3_005956-T1 ID=KJC3_005956-T1|Name=KJC3_005956-T1|organism=Aspergillus niger KJC3|type=CDS|length=6120bp|location=Sequence derived from alignment at ch4:4240613..4242320+ (Aspergillus niger KJC3)
ATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAACC
AAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCTCG
GGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCT
TATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCC
TGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTT
ATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCA
AAGGCCATGCGCGAGTATTACGAGCGCAACAACGATCTGATATCGCAATA
TGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTG
TGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGC
CGGGCATATGACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCCGG
TAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACG
AGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCC
CCAGACATCATCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGTAT
AGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCTAG
TCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCC
AGCTTAGTCGACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGGAT
CACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAGCC
GTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTG
ACATCTTTCGTCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCTTC
CGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCA
GCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAG
AACTCGAGCGTCCAAGCACTAGCACAAGACGCCATGACGGACGTAATCTT
CAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACCACAACCT
GGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTAC
AACTGGAGCGCCACAGCCAGCGAACACATCGGCCATCTAACAGGCGCCGC
AGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATGCGGTTCT
CGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGAT
CGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCGAAGACCAGACTCCA
AGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGC
CTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATT
CCGAGTCATATGAACCAGATTGAGGGGTGAATGCTTACCTCTTCGCCGCG
ATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACG
ATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGACGGCGC
TCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTTGA
AGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTA
GGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCAACATTTCTAT
CAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTATTA
CGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGC
TGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCACAGCAACCAG
CCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACCTC
CTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCC
GAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCCACTCCTGCCC
CCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACAAA
CGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACG
TCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGATTATTGCTATG
ACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCACT
GGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTC
GACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACTCGAACCACTC
AGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTCGC
ACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATC
TATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTATCGTCAAGCTC
ATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCACT
AGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCT
TCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGACCCGTTAGGC
GGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAG
CGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACA
GTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAATTCTCAAGATC
CAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGA
TATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGG
AGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGATAGGGCATTC
GTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAGAT
TGAGGGGTGAATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGG
CGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGC
CAACGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGC
CGATAATCCTTATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCG
GGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGC
AGGCCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAA
GAAAATGCCAAAGGCCATGCGCGAGTATTACGAGCGCAACAACGATCTGA
TATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCAT
CGTCTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTC
AACCAACGGCCGGGCATATGACGCAACCTCCTACGGCACAGGAGATACCA
AAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCC
AGCGAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGT
AGCATCACCCCCAGACATCATCCCCACAAACGATGAGTTCGTCGACAGCA
GCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTC
CTCCTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATC
CGTCCTGGCCAGCTTAGTCGACGGGGCACTGGACTTCCTCAGCACAGCCA
TAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATAC
CCGATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGT
CGTAATGGTGACATCTTTCGTCCAAGTCGCACTCACATCCTTCACACGCC
TCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCT
GTCATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCG
ACTGATTAAGAACTCGAGCGTCCAAGCACTAGCACAAGACGCCATGACGG
ACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTG
ACCACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTA
CATAATCTACAACTGGAGCGCCACAGCCAGCGAACACATCGGCCATCTAA
CAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACG
ATGCGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTA
CGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCCTGGACCCGAAGA
CCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTG
GAGAGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCC
GTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGTGAATGCTTACCT
CTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGAC
TTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAAT
ACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTG
AAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTT
GAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGCA
ACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGC
GCGAGTATTACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATT
GACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGATTGTGGACTATCA
CAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATG
ACGCAACCTCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAG
AGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAACGAGACATCTCC
ACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCA
TCCCCACAAACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTA
GCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCTAGTCGCAAAGAT
TATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCG
ACGGGGCACTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACC
TTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAGCCGTCGCCGACT
CGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCG
TCCAAGTCGCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCC
GTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGCCAGCACAGTTAT
CGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCG
TCCAAGCACTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTC
AGTATTCTCTTCCCTCTCATCGGCTCCCTGACCACAACCTGGTACATCGA
CCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCG
CCACAGCCAGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCC
AAAGACCACAGTATTCTGCTGTACATGACGATGCGGTTCTCGAAAGCAAT
TCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACG
TCGAGGTGGATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCAT
GATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTACGGTGGA
TAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATA
TGAACCAGATTGAGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008324cation transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005956KJC3_005956Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005956-T1.exon1KJC3_005956-T1.exon1Aspergillus niger KJC3exon
KJC3_005956-T1.exon2KJC3_005956-T1.exon2Aspergillus niger KJC3exon
KJC3_005956-T1.exon3KJC3_005956-T1.exon3Aspergillus niger KJC3exon
KJC3_005956-T1.exon4KJC3_005956-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005956-T1.cdsKJC3_005956-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005956-T1KJC3_005956-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027470
DBxrefInterPro:IPR036837
DBxrefInterPro:IPR027469
DBxrefInterPro:IPR002524
DBxrefPFAM:PF16916
DBxrefPFAM:PF01545
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4240613..4242320 +
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