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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4262434..4264551- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005963-T1 ID=KJC3_005963-T1|Name=KJC3_005963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2118bp|location=Sequence derived from alignment at ch4:4262434..4264551- (Aspergillus niger KJC3)
ATGGAAGCCACACAGACGCCGTATGGCCCTGCACGGGTCCCGAAACACTT
TGTCCTGTGCTTTGATGGGACTGGAAACAAATTTAGCGGCGATCAGTCGG
ATAGCAATGTTCTCAAGATCTTTCGGGTAAGTAAGCTCCAAGCAAGCCCC
GCGAGACTAGTTGTCCTTTATGATCGCTTCGCTCACGGATTCTTTTCGAA
ATATGAAGATGCTCGATCGGAGTAAGAGCCACCAGTTCCACTACTACCAA
CCTGGTATCGGAACCTACGTAACAAGCAAGTCCCTTTCTAGCCATGGGCG
AATCCAAAAGATCAAATCGGCATACTTCAAAGCTAAAGACTCCGCCGTTG
GCTCTTCTTTTGATGAGCATGTGATGGGCGGTTATAAGTTCCTCATGAGA
TACTACCAAACTGGTGACGATATCTATTTCATCGGGTTTAGTAGAGGATC
TTATATCGCGCGTTTTCTAGCCGAGATGCTCGACTATATCGGCTTACTCG
AAGCCGGAAATGAGGAGCTAGTTCGATTCGCCTGGAAGACGTTCGCCAAA
TGGCAGCAGCGACGGGACGACAATAAGGAGGAAAAGGAAGAGAAGAAGAA
ACTGTTCCGCTACATGAAGGCGTTCCGCGAAACGTTCAGTCGTCCTATCA
GTAGGATCAAGTTTATGGGCCTATTTGATACGGTCAATAGCGTTCCAAGG
TTTGAATCAGCATGGATGGAGAGAAGTAAATTTCCTTATACCGCCCGAAG
CTCGGCTCTAGTCATTCGACATGCGGTCAGCATCGACGAGCGACGAGCCA
AATTCCGCCAAGATTTGATTTCTGAAATCAGGCCATGGCATGATAAGAAG
CATCCCATTCAAGAGCGAGGACGACAGTATATGCAACACCTCCGTCACCC
CCTGGCGGGCCGCAAGAATGGAAATGGAAATGTGCCCGTGCTCAGGATCA
ACAGCGACAATATTGGTACGGACGATGGCGCACCACCCGCCAAACACGAT
GAGGAAGAAACAGCATCCGTCTATCGTAGTGCCCACGCCTCTCACGAGAA
TCTTCATGATAGCCACCCATACCGTGCAAGCAACCTTGCAGTGCCCGGAA
GGAGTCTGAACCTCGCGGTGCCTATACCCACGGAGTCAACCGAGGACCTA
AGCTCTATCAGAAGTGGACAGTCTGGGCAGTTGTCGCTTAATATACAGCT
CGCAACAGGCCAATTTGATGAAGAGGACGAGAGAAAACAGGACATACAAG
AAGTTTGGTTTCCTGGCTGTCACGCTGACATTGGAGGAGGATGGAAACGT
GCAAAAGGCGAGGCTTGGCCACTGAGTCACGCGCCCTTGGTGTGGATGGT
CCAGGAAGCGAAAAAGGCCGGGCTGCAATTTGACCCGAAGAAATTGAAGC
AGTTCGAATGCGACGAAGAATACGATGGCGAATATACCCCAATCAACGAA
CACAGCCAATGGCACCCTCGGCACGAATTCTGTCGCGATCCTATTCACAA
CAAAGCTGTGAACGGCCAACACATGCTCAAGCTAGCCGGTGATGAGCGAA
AGAAGGATGCTTCCGCGTCAAGTAACCGCTTCCACGATGCCCTTGTTGCT
TCCAGCACGGATGGCTTCTTGCACGACTGTCTGGAATTCAATGCCGGCTT
ACCGGCACTCTCCGTCATAAGCTGGCGCATAATGGAATACCTTCCATTCC
GTCGGATGGACCTCCAGACAGACGGCTCATGGAAGCCAATCCGCTGGCCC
CTCCCTTGCGGAGAGGTTCGCGACATTCCCGACGATGCTCAGATCCATGT
CTCCGCACTGCGTCGCATGCAGACGAATCCCAATTACCGCCCCGGTAATT
TGATCAAGGGCGGAGGCGGGCGCGGTGTCAAGGTAGCACCGAAAGAATTA
GGGATTGGGCAATGGGAGCTAAAAGCCCATGGGGGCGACATTGTGCGGGA
GACATATGTGCGGAAGAAGAATAAGGACGCGACAATGTGTGAAGATGAAT
GCCATCATTAACAACGCCTACCATTTCAGCCGAATCTCTTTCATTTGTGG
GCTTTCAGTTTCTGGTATGTAAATTTCAGATTCTCCTCCAGTCTCTGCTC
TGTCTGGATTATCCTCTC back to topCoding sequence (CDS) from alignment at ch4:4262434..4264551- >KJC3_005963-T1 ID=KJC3_005963-T1|Name=KJC3_005963-T1|organism=Aspergillus niger KJC3|type=CDS|length=3858bp|location=Sequence derived from alignment at ch4:4262434..4264551- (Aspergillus niger KJC3)
ATGCTCGATCGGAGTAAGAGCCACCAGTTCCACTACTACCAACCTGGTAT
CGGAACCTACGTAACAAGCAAGTCCCTTTCTAGCCATGGGCGAATCCAAA
AGATCAAATCGGCATACTTCAAAGCTAAAGACTCCGCCGTTGGCTCTTCT
TTTGATGAGCATGTGATGGGCGGTTATAAGTTCCTCATGAGATACTACCA
AACTGGTGACGATATCTATTTCATCGGGTTTAGTAGAGGATCTTATATCG
CGCGTTTTCTAGCCGAGATGCTCGACTATATCGGCTTACTCGAAGCCGGA
AATGAGGAGCTAGTTCGATTCGCCTGGAAGACGTTCGCCAAATGGCAGCA
GCGACGGGACGACAATAAGGAGGAAAAGGAAGAGAAGAAGAAACTGTTCC
GCTACATGAAGGCGTTCCGCGAAACGTTCAGTCGTCCTATCAGTAGGATC
AAGTTTATGGGCCTATTTGATACGGTCAATAGCGTTCCAAGGTTTGAATC
AGCATGGATGGAGAGAAGTAAATTTCCTTATACCGCCCGAAGCTCGGCTC
TAGTCATTCGACATGCGGTCAGCATCGACGAGCGACGAGCCAAATTCCGC
CAAGATTTGATTTCTGAAATCAGGCCATGGCATGATAAGAAGCATCCCAT
TCAAGAGCGAGGACGACAGTATATGCAACACCTCCGTCACCCCCTGGCGG
GCCGCAAGAATGGAAATGGAAATGTGCCCGTGCTCAGGATCAACAGCGAC
AATATTGGTACGGACGATGGCGCACCACCCGCCAAACACGATGAGGAAGA
AACAGCATCCGTCTATCGTAGTGCCCACGCCTCTCACGAGAATCTTCATG
ATAGCCACCCATACCGTGCAAGCAACCTTGCAGTGCCCGGAAGGAGTCTG
AACCTCGCGGTGCCTATACCCACGGAGTCAACCGAGGACCTAAGCTCTAT
CAGAAGTGGACAGTCTGGGCAGTTGTCGCTTAATATACAGCTCGCAACAG
GCCAATTTGATGAAGAGGACGAGAGAAAACAGGACATACAAGAAGTTTGG
TTTCCTGGCTGTCACGCTGACATTGGAGGAGGATGGAAACGTGCAAAAGG
CGAGGCTTGGCCACTGAGTCACGCGCCCTTGGTGTGGATGGTCCAGGAAG
CGAAAAAGGCCGGGCTGCAATTTGACCCGAAGAAATTGAAGCAGTTCGAA
TGCGACGAAGAATACGATGGCGAATATACCCCAATCAACGAACACAGCCA
ATGGCACCCTCGGCACGAATTCTGTCGCGATCCTATTCACAACAAAGCTG
TGAACGGCCAACACATGCTCAAGCTAGCCGGTGATGAGCGAAAGAAGGAT
GCTTCCGCGTCAAGTAACCGCTTCCACGATGCCCTTGTTGCTTCCAGCAC
GGATGGCTTCTTGCACGACTGTCTGGAATTCAATGCCGGCTTACCGGCAC
TCTCCGTCATAAGCTGGCGCATAATGGAATACCTTCCATTCCGTCGGATG
GACCTCCAGACAGACGGCTCATGGAAGCCAATCCGCTGGCCCCTCCCTTG
CGGAGAGGTTCGCGACATTCCCGACGATGCTCAGATCCATGTCTCCGCAC
TGCGTCGCATGCAGACGAATCCCAATTACCGCCCCGGTAATTTGATCAAG
GGCGGAGGCGGGCGCGGTGTCAAGGTAGCACCGAAAGAATTAGGGATTGG
GCAATGGGAGCTAAAAGCCCATGGGGGCGACATTGTGCGGGAGACATATG
TGCGGAAGAAGAATAAGGACGCGACAATGTGTGAAGATGAATGCCATCAT
TAAATGGAAGCCACACAGACGCCGTATGGCCCTGCACGGGTCCCGAAACA
CTTTGTCCTGTGCTTTGATGGGACTGGAAACAAATTTAGCGGCGATCAGT
CGGATAGCAATGTTCTCAAGATCTTTCGGATGCTCGATCGGAGTAAGAGC
CACCAGTTCCACTACTACCAACCTGGTATCGGAACCTACGTAACAAGCAA
GTCCCTTTCTAGCCATGGGCGAATCCAAAAGATCAAATCGGCATACTTCA
AAGCTAAAGACTCCGCCGTTGGCTCTTCTTTTGATGAGCATGTGATGGGC
GGTTATAAGTTCCTCATGAGATACTACCAAACTGGTGACGATATCTATTT
CATCGGGTTTAGTAGAGGATCTTATATCGCGCGTTTTCTAGCCGAGATGC
TCGACTATATCGGCTTACTCGAAGCCGGAAATGAGGAGCTAGTTCGATTC
GCCTGGAAGACGTTCGCCAAATGGCAGCAGCGACGGGACGACAATAAGGA
GGAAAAGGAAGAGAAGAAGAAACTGTTCCGCTACATGAAGGCGTTCCGCG
AAACGTTCAGTCGTCCTATCAGTAGGATCAAGTTTATGGGCCTATTTGAT
ACGGTCAATAGCGTTCCAAGGTTTGAATCAGCATGGATGGAGAGAAGTAA
ATTTCCTTATACCGCCCGAAGCTCGGCTCTAGTCATTCGACATGCGGTCA
GCATCGACGAGCGACGAGCCAAATTCCGCCAAGATTTGATTTCTGAAATC
AGGCCATGGCATGATAAGAAGCATCCCATTCAAGAGCGAGGACGACAGTA
TATGCAACACCTCCGTCACCCCCTGGCGGGCCGCAAGAATGGAAATGGAA
ATGTGCCCGTGCTCAGGATCAACAGCGACAATATTGGTACGGACGATGGC
GCACCACCCGCCAAACACGATGAGGAAGAAACAGCATCCGTCTATCGTAG
TGCCCACGCCTCTCACGAGAATCTTCATGATAGCCACCCATACCGTGCAA
GCAACCTTGCAGTGCCCGGAAGGAGTCTGAACCTCGCGGTGCCTATACCC
ACGGAGTCAACCGAGGACCTAAGCTCTATCAGAAGTGGACAGTCTGGGCA
GTTGTCGCTTAATATACAGCTCGCAACAGGCCAATTTGATGAAGAGGACG
AGAGAAAACAGGACATACAAGAAGTTTGGTTTCCTGGCTGTCACGCTGAC
ATTGGAGGAGGATGGAAACGTGCAAAAGGCGAGGCTTGGCCACTGAGTCA
CGCGCCCTTGGTGTGGATGGTCCAGGAAGCGAAAAAGGCCGGGCTGCAAT
TTGACCCGAAGAAATTGAAGCAGTTCGAATGCGACGAAGAATACGATGGC
GAATATACCCCAATCAACGAACACAGCCAATGGCACCCTCGGCACGAATT
CTGTCGCGATCCTATTCACAACAAAGCTGTGAACGGCCAACACATGCTCA
AGCTAGCCGGTGATGAGCGAAAGAAGGATGCTTCCGCGTCAAGTAACCGC
TTCCACGATGCCCTTGTTGCTTCCAGCACGGATGGCTTCTTGCACGACTG
TCTGGAATTCAATGCCGGCTTACCGGCACTCTCCGTCATAAGCTGGCGCA
TAATGGAATACCTTCCATTCCGTCGGATGGACCTCCAGACAGACGGCTCA
TGGAAGCCAATCCGCTGGCCCCTCCCTTGCGGAGAGGTTCGCGACATTCC
CGACGATGCTCAGATCCATGTCTCCGCACTGCGTCGCATGCAGACGAATC
CCAATTACCGCCCCGGTAATTTGATCAAGGGCGGAGGCGGGCGCGGTGTC
AAGGTAGCACCGAAAGAATTAGGGATTGGGCAATGGGAGCTAAAAGCCCA
TGGGGGCGACATTGTGCGGGAGACATATGTGCGGAAGAAGAATAAGGACG
CGACAATGTGTGAAGATGAATGCCATCATTAAATGGAAGCCACACAGACG
CCGTATGGCCCTGCACGGGTCCCGAAACACTTTGTCCTGTGCTTTGATGG
GACTGGAAACAAATTTAGCGGCGATCAGTCGGATAGCAATGTTCTCAAGA
TCTTTCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005963-T1.utr3p1 | KJC3_005963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018712 |
| DBxref | PFAM:PF09994 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4262434..4264551 - |
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