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KJC3_005966-T1, KJC3_005966-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005966-T1
Unique NameKJC3_005966-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4275485..4277065+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005966-T1 ID=KJC3_005966-T1|Name=KJC3_005966-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch4:4275485..4277065+ (Aspergillus niger KJC3)
GGAAGAAAAAATTGGAGATCCTGCTCCAACCACCCCCGCCTTCACTCGCA
CTGTGTGCAATGTCCCGAATGCAGCCTTACCCAGCTCAGTATTTGCTCTT
GTGAGCAAGATCCTTAGCAAATTCTTTGGCGAGCCATCCTCTTTTCTTGT
CGCCCAAAGCCTTAACCGATAGTTATTGGCCATTCCAGACGTGGGCGCTT
AAGATCTCCAGACGGCGTAGCAGATATGGCCCCCATACCAGACACTCGAC
ACGAAACACCAGAGCTGGCAAGCCATTAGCCGCCGAGCAACCCAAGAAGA
GCACTAAACAACCATGCTCTAAAAACAAGCCAGCTCCATCTTCTCAACGA
TCCTTACCCTCCATGAAACTCAATCCAGCATCCCAGTCTGTTTCCCTTCC
CCAGACTGCCCCTACATCCCCTGCCCTCTCCCTCTCCCTCCCCTAGCAAA
CAGCAAAACAGCTCCAGCTCCAACTCCAGCAAAATGTCCAGCGACAGCAA
CGACCTCGCCCCTCCATTCGGCTACCCCGTCCGCCGCAACGGCACCTGCT
ACGACACTGAAAACGACTGCGGTTCAACCTGGGGTCCCTACCGCGAATGC
TGTCCCAAGGGCGCCACCTGCGCCCCCGGGAACTGCTGCCACTCCGCCGC
AGCATGCGGCAACATTCTCAAACTGGATCCGCATTGCGGGAATACCTCGG
CCATTCTGTATTATGAGAATGATTACTTTTGTTGCTCGAGGGGGACAGAT
GCGTTTGCGCGCGTGTCGAATGGGTTTGTGGGCTGTACGGATGATGTTTC
TACCTTGGGTTCGGAATTTAGTTTGTTGTCGCCTGTTTCGACGACGAGTT
CGTGTGAGCTGGACTTCTCTGGTGTTAGCTTGAGGATCGAAACTAACAGG
GATTATAGCTTCATCTGCTACTGCGTCTGCTACGGTGACGTCACATGCTG
CATCTACGTCGACAGCAGATAGTAGCGCATCATCCTCGATATTATCATCA
GCAACAGCTCAGCCTACAACTGCATCTTCAAATACGGAGAGAAAAACAAA
TAGAGGCGCCATCGCAGGCGGGGTGGTAGGTGGTGTCGCCGGCTTAGCGC
TCATTGTCTTCTTGATCTGGTTCATGATCTCGAGAAGAATGCAGGCCGCA
CGAAGACAAGCAGATGATGATATGCCTTCTTCGACATACTTTGGTTCTCG
AAGCAAGAATCATCACCCGAGAGAGCTGGAAGGGGATGCTGCTGCCCCGC
CCGCTGCTGAGTTGGTGTCTGCTCCGCCGGTTTATGAGTTGGGATCACGA
CCTCCTGTGTATGAGTTGGGGTCGAGGCCGCCTGTTTTCGAGTTGGCGGG
CGGTGTGGGTGAAGGGGGGAGGATATGATTATGATAGTGTATGTGTAGGC
GTTACTTATTGTACATATTGATTGCATGGTGTTGATATAACGACTAAGGG
AGATGATAATTTCTCCCGATTCTGATTATTGGGAAAGCAGCCTTACAGGC
AATGTGACAGTGTCATGCTTCATACACCATGACTTAATAATAGTATACCA
AATACTACAATGCATCAAGATTTCTTCAACC
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Coding sequence (CDS) from alignment at ch4:4275485..4277065+

>KJC3_005966-T1 ID=KJC3_005966-T1|Name=KJC3_005966-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch4:4275485..4277065+ (Aspergillus niger KJC3)
ATGTCCAGCGACAGCAACGACCTCGCCCCTCCATTCGGCTACCCCGTCCG
CCGCAACGGCACCTGCTACGACACTGAAAACGACTGCGGTTCAACCTGGG
GTCCCTACCGCGAATGCTGTCCCAAGGGCGCCACCTGCGCCCCCGGGAAC
TGCTGCCACTCCGCCGCAGCATGCGGCAACATTCTCAAACTGGATCCGCA
TTGCGGGAATACCTCGGCCATTCTGTATTATGAGAATGATTACTTTTGTT
GCTCGAGGGGGACAGATGCGTTTGCGCGCGTGTCGAATGGGTTTGTGGGC
TGTACGGATGATGTTTCTACCTTGGGTTCGGAATTTAGTTTGTTGTCGCC
TGTTTCGACGACGAGTTCGTCTTCATCTGCTACTGCGTCTGCTACGGTGA
CGTCACATGCTGCATCTACGTCGACAGCAGATAGTAGCGCATCATCCTCG
ATATTATCATCAGCAACAGCTCAGCCTACAACTGCATCTTCAAATACGGA
GAGAAAAACAAATAGAGGCGCCATCGCAGGCGGGGTGGTAGGTGGTGTCG
CCGGCTTAGCGCTCATTGTCTTCTTGATCTGGTTCATGATCTCGAGAAGA
ATGCAGGCCGCACGAAGACAAGCAGATGATGATATGCCTTCTTCGACATA
CTTTGGTTCTCGAAGCAAGAATCATCACCCGAGAGAGCTGGAAGGGGATG
CTGCTGCCCCGCCCGCTGCTGAGTTGGTGTCTGCTCCGCCGGTTTATGAG
TTGGGATCACGACCTCCTGTGTATGAGTTGGGGTCGAGGCCGCCTGTTTT
CGAGTTGGCGGGCGGTGTGGGTGAAGGGGGGAGGATATGAATGTCCAGCG
ACAGCAACGACCTCGCCCCTCCATTCGGCTACCCCGTCCGCCGCAACGGC
ACCTGCTACGACACTGAAAACGACTGCGGTTCAACCTGGGGTCCCTACCG
CGAATGCTGTCCCAAGGGCGCCACCTGCGCCCCCGGGAACTGCTGCCACT
CCGCCGCAGCATGCGGCAACATTCTCAAACTGGATCCGCATTGCGGGAAT
ACCTCGGCCATTCTGTATTATGAGAATGATTACTTTTGTTGCTCGAGGGG
GACAGATGCGTTTGCGCGCGTGTCGAATGGGTTTGTGGGCTGTACGGATG
ATGTTTCTACCTTGGGTTCGGAATTTAGTTTGTTGTCGCCTGTTTCGACG
ACGAGTTCGTCTTCATCTGCTACTGCGTCTGCTACGGTGACGTCACATGC
TGCATCTACGTCGACAGCAGATAGTAGCGCATCATCCTCGATATTATCAT
CAGCAACAGCTCAGCCTACAACTGCATCTTCAAATACGGAGAGAAAAACA
AATAGAGGCGCCATCGCAGGCGGGGTGGTAGGTGGTGTCGCCGGCTTAGC
GCTCATTGTCTTCTTGATCTGGTTCATGATCTCGAGAAGAATGCAGGCCG
CACGAAGACAAGCAGATGATGATATGCCTTCTTCGACATACTTTGGTTCT
CGAAGCAAGAATCATCACCCGAGAGAGCTGGAAGGGGATGCTGCTGCCCC
GCCCGCTGCTGAGTTGGTGTCTGCTCCGCCGGTTTATGAGTTGGGATCAC
GACCTCCTGTGTATGAGTTGGGGTCGAGGCCGCCTGTTTTCGAGTTGGCG
GGCGGTGTGGGTGAAGGGGGGAGGATATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005966KJC3_005966Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005966-T1.utr5p1KJC3_005966-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005966-T1.exon1KJC3_005966-T1.exon1Aspergillus niger KJC3exon
KJC3_005966-T1.exon2KJC3_005966-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005966-T1.cdsKJC3_005966-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005966-T1.utr3p1KJC3_005966-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005966-T1KJC3_005966-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4275485..4277065 +
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