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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4304431..4307595+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005977-T1 ID=KJC3_005977-T1|Name=KJC3_005977-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3165bp|location=Sequence derived from alignment at ch4:4304431..4307595+ (Aspergillus niger KJC3)
CGGAAAGCTTTTGTTCTATTGCGCTACTCAACTACTGAGAAAGAGACTCA
TCAAGCACGAGACTTATTTGTCAACACTGATTCTTGCACTGTGACGCGAC
GCCGCTGCTTACAGAAACACAGTTGGTAGTGCATCGCACTCCGTTTCGCA
TCTTTCTCCGACCTCCGCCGCAATTGCGACTTTTACGACCGAACGATAGT
CAACAAAGAAGACTTCGCCGTCGGTCGTCTTAGCACTCCAGGCTCGTGAA
TGCTACCGTCTCAAAAAGATCATTAATATGAAATTGTATGCGATCGGAAC
AAATCTCATTTTCTAAGTTGCCAGTCTGCAGAGCCGCCTGTTTTCGGGAT
CTTGAAGGCCAGCATACCCCTAGGATTCCGTCCCCGAGCACGCGCACGCC
GGCTATCCACAAAAGGGGTGCGCTGGGACCTTAAAGGTCGCTGGAATTGT
TGGAGTGATGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGG
ATAGTCGCGTTGCCAATCAAGGGTCGACAAACCCATACGAAACAAATCCC
GATCTCCTCCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGG
CCGCTACGCGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGT
GCGAACCGGATCCAGAGGTCACCTCATATTGGGAAGGGATTGTCAAAGAA
CTCTGTACAGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTT
CGCTGCTGGCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCG
CCGCTGCTGAGAAATACTCGTGTGCCAACGCCAATGAATTGAGTGCCGCA
AGGAAGGCTGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCAT
TTACTTTTGCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAA
TCCCTGGCGTTACTCTCGAGGTAGCCTGGCGATACCTCACAGCTGAGCAG
ATCGACATGTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGG
AATAGACGCATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACT
CACAAGCGTCACCTGATGCCCTGGAACCAGAGAAGAATATACTTTTTCGT
GAAAGGAAGGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACC
GTCGAACATTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGC
GACAGAGCGGGTACTTCGGCTTTGAAAGGGCAGATGAGATACATCGACGC
TTTAGGATACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCT
GCGAGCGTGGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTA
GACCCACAAGCAAGCAAGATACGCCCATTCCTCTAGTCAAGACTGAGCCT
CTCAACACGAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAA
GCCACCGGTTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAA
AGAACATTGCGAGTCTCAAGAATAGGGGGTCTTCTAGAGCGTCGTCTTCT
GACCGCTCCTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATC
TGCTACTGCTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAA
AGAGGAAAGCAAACGAATTGGAAAGCGATAATGTTGATGGCGGTCGTTCC
AACACTCCATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAA
TTCTACCTCGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGA
GCAAGAACGTTGAACAGGATGAGATAGAAGAAGAGGAAGAAGATGACTCT
GATGATAACGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATAC
ATGGATGATCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGT
GCGTCAACATCGACCCGAGAGACGCAGACCTCATTGACAAGTACATCTGT
ATGACATCCTTTTGATATGCCACGCATAATCTATACCCGTGCACTAACAC
TACGCAGGTCCGAATTGCAAAGAGCAAGGCAAAGGATGGACCACATGGAA
ACCTATGTGCCGGCTAAAGGAATGCCGCAAGCCCGCCCGAGTCAACCAGA
AAATCCCTAGCAAATACTGCTCAGACGAACATGGCCGGGAGTTCATGCTT
CAGCGAACTAAGCTTCTCCTGGGTACGGGAACGAGAGCAAAGACGACCGC
AGCAGGCCGAGCAACCACCAATGGCATCAATTCGAGCGAAAGCAATAGTC
GTGATGGGACCGCTACACCAGACAGACGAGATCCGGATGATTTAGGAAGT
CGAGGTGGAGTCCTTACAACAGGCGATCTCAAAGCCGTCGTAATGGGCGT
CAGCTCAGCTAAAGAATTCCGCAAACTAGGCGAAAGCATCATATCGATCC
CAGCCAAAGAGGAAAGCACCACCATTACCACCACCGATCCCGAAACAGAG
ACCAAGAATGAAAAGAAGATTGGTTTGGATTTCGACGTGGACTGGCTCAC
GTACTCACCCGACGAAGCATCCAAACTACAGAAGCTCCGTAAGCAACGGG
ACGACCTACTCCATCGCAAAGAGATGCTCCGCGCCCGAAACACATTCATG
ACACTGGTGCGCCAGCGATCCAAGAGCATCCTGGAGCACCTAAAACAAAC
CGACCCGAAAAACGGATGGAAAGATATCTGCGGTTTCGACAGCAGACTTG
CATGGTCGGACGAAGAATTTGATGAATGGCGGTTATCCGAAATTGGCGCG
AAAGCACTCGAGGATGGCTCGCCCGAAGCTCTGGCATCAAGCTATCCCGA
CGCTTCCACGGACGCCGATGGCGACACCGCCATGGATGACAACAACGAAG
ATGACTTCGAGAAACTCTCACGTGGTGTCTGTACTAAGAAGCGTTGCGAG
AGACATAAACAATGGCTCAAGGTCCAACAGCAAGATGCTGTATTCGAGGA
AAACACCCTCGCTCTGGATCTAAGCAAATGCGAGAAGGAAGCGAAGAATG
TCGTGGAGAGGGCCGTTCTTAGGATGTGGGCCGAATCAGACAATGCGCAA
ATTGGTGGCCAGTAA back to topCoding sequence (CDS) from alignment at ch4:4304431..4307595+ >KJC3_005977-T1 ID=KJC3_005977-T1|Name=KJC3_005977-T1|organism=Aspergillus niger KJC3|type=CDS|length=5298bp|location=Sequence derived from alignment at ch4:4304431..4307595+ (Aspergillus niger KJC3)
ATGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGGATAGTCG
CGTTGCCAATCAAGGGTCGACAAACCCATACGAAACAAATCCCGATCTCC
TCCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGGCCGCTAC
GCGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGTGCGAACC
GGATCCAGAGGTCACCTCATATTGGGAAGGGATTGTCAAAGAACTCTGTA
CAGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTTCGCTGCT
GGCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCGCCGCTGC
TGAGAAATACTCGTGTGCCAACGCCAATGAATTGAGTGCCGCAAGGAAGG
CTGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCATTTACTTT
TGCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAATCCCTGG
CGTTACTCTCGAGGTAGCCTGGCGATACCTCACAGCTGAGCAGATCGACA
TGTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGGAATAGAC
GCATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACTCACAAGC
GTCACCTGATGCCCTGGAACCAGAGAAGAATATACTTTTTCGTGAAAGGA
AGGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACCGTCGAAC
ATTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGCGACAGAG
CGGGTACTTCGGCTTTGAAAGGGCAGATGAGATACATCGACGCTTTAGGA
TACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCTGCGAGCG
TGGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTAGACCCAC
AAGCAAGCAAGATACGCCCATTCCTCTAGTCAAGACTGAGCCTCTCAACA
CGAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAAGCCACCG
GTTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAAAGAACAT
TGCGAGTCTCAAGAATAGGGGGTCTTCTAGAGCGTCGTCTTCTGACCGCT
CCTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATCTGCTACT
GCTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAAAGAGGAA
AGCAAACGAATTGGAAAGCGATAATGTTGATGGCGGTCGTTCCAACACTC
CATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAATTCTACC
TCGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGAGCAAGAA
CGTTGAACAGGATGAGATAGAAGAAGAGGAAGAAGATGACTCTGATGATA
ACGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATACATGGATG
ATCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGTGCGTCAA
CATCGACCCGAGAGACGCAGACCTCATTGACAAGTACATCTGTCCGAATT
GCAAAGAGCAAGGCAAAGGATGGACCACATGGAAACCTATGTGCCGGCTA
AAGGAATGCCGCAAGCCCGCCCGAGTCAACCAGAAAATCCCTAGCAAATA
CTGCTCAGACGAACATGGCCGGGAGTTCATGCTTCAGCGAACTAAGCTTC
TCCTGGGTACGGGAACGAGAGCAAAGACGACCGCAGCAGGCCGAGCAACC
ACCAATGGCATCAATTCGAGCGAAAGCAATAGTCGTGATGGGACCGCTAC
ACCAGACAGACGAGATCCGGATGATTTAGGAAGTCGAGGTGGAGTCCTTA
CAACAGGCGATCTCAAAGCCGTCGTAATGGGCGTCAGCTCAGCTAAAGAA
TTCCGCAAACTAGGCGAAAGCATCATATCGATCCCAGCCAAAGAGGAAAG
CACCACCATTACCACCACCGATCCCGAAACAGAGACCAAGAATGAAAAGA
AGATTGGTTTGGATTTCGACGTGGACTGGCTCACGTACTCACCCGACGAA
GCATCCAAACTACAGAAGCTCCGTAAGCAACGGGACGACCTACTCCATCG
CAAAGAGATGCTCCGCGCCCGAAACACATTCATGACACTGGTGCGCCAGC
GATCCAAGAGCATCCTGGAGCACCTAAAACAAACCGACCCGAAAAACGGA
TGGAAAGATATCTGCGGTTTCGACAGCAGACTTGCATGGTCGGACGAAGA
ATTTGATGAATGGCGGTTATCCGAAATTGGCGCGAAAGCACTCGAGGATG
GCTCGCCCGAAGCTCTGGCATCAAGCTATCCCGACGCTTCCACGGACGCC
GATGGCGACACCGCCATGGATGACAACAACGAAGATGACTTCGAGAAACT
CTCACGTGGTGTCTGTACTAAGAAGCGTTGCGAGAGACATAAACAATGGC
TCAAGGTCCAACAGCAAGATGCTGTATTCGAGGAAAACACCCTCGCTCTG
GATCTAAGCAAATGCGAGAAGGAAGCGAAGAATGTCGTGGAGAGGGCCGT
TCTTAGGATGTGGGCCGAATCAGACAATGCGCAAATTGGTGGCCAGTAAA
TGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGGATAGTCGC
GTTGCCAATCAAGGGTCGACAAACCCATACGAAACAAATCCCGATCTCCT
CCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGGCCGCTACG
CGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGTGCGAACCG
GATCCAGAGGTCACCTCATATTGGGAAGGGATTGTCAAAGAACTCTGTAC
AGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTTCGCTGCTG
GCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCGCCGCTGCT
GAGAAATACTCGTGTGCCAACGCCAATGAATTGAGTGCCGCAAGGAAGGC
TGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCATTTACTTTT
GCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAATCCCTGGC
GTTACTCTCGAGGTAGCCTGGCGATACCTCACAGCTGAGCAGATCGACAT
GTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGGAATAGACG
CATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACTCACAAGCG
TCACCTGATGCCCTGGAACCAGAGAAGAATATACTTTTTCGTGAAAGGAA
GGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACCGTCGAACA
TTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGCGACAGAGC
GGGTACTTCGGCTTTGAAAGGGCAGATGAGATACATCGACGCTTTAGGAT
ACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCTGCGAGCGT
GGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTAGACCCACA
AGCAAGCAAGATACGCCCATTCCTCTAGTCAAGACTGAGCCTCTCAACAC
GAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAAGCCACCGG
TTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAAAGAACATT
GCGAGTCTCAAGAATAGGGGGTCTTCTAGAGCGTCGTCTTCTGACCGCTC
CTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATCTGCTACTG
CTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAAAGAGGAAA
GCAAACGAATTGGAAAGCGATAATGTTGATGGCGGTCGTTCCAACACTCC
ATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAATTCTACCT
CGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGAGCAAGAAC
GTTGAACAGGATGAGATAGAAGAAGAGGAAGAAGATGACTCTGATGATAA
CGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATACATGGATGA
TCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGTGCGTCAAC
ATCGACCCGAGAGACGCAGACCTCATTGACAAGTACATCTGTCCGAATTG
CAAAGAGCAAGGCAAAGGATGGACCACATGGAAACCTATGTGCCGGCTAA
AGGAATGCCGCAAGCCCGCCCGAGTCAACCAGAAAATCCCTAGCAAATAC
TGCTCAGACGAACATGGCCGGGAGTTCATGCTTCAGCGAACTAAGCTTCT
CCTGGGTACGGGAACGAGAGCAAAGACGACCGCAGCAGGCCGAGCAACCA
CCAATGGCATCAATTCGAGCGAAAGCAATAGTCGTGATGGGACCGCTACA
CCAGACAGACGAGATCCGGATGATTTAGGAAGTCGAGGTGGAGTCCTTAC
AACAGGCGATCTCAAAGCCGTCGTAATGGGCGTCAGCTCAGCTAAAGAAT
TCCGCAAACTAGGCGAAAGCATCATATCGATCCCAGCCAAAGAGGAAAGC
ACCACCATTACCACCACCGATCCCGAAACAGAGACCAAGAATGAAAAGAA
GATTGGTTTGGATTTCGACGTGGACTGGCTCACGTACTCACCCGACGAAG
CATCCAAACTACAGAAGCTCCGTAAGCAACGGGACGACCTACTCCATCGC
AAAGAGATGCTCCGCGCCCGAAACACATTCATGACACTGGTGCGCCAGCG
ATCCAAGAGCATCCTGGAGCACCTAAAACAAACCGACCCGAAAAACGGAT
GGAAAGATATCTGCGGTTTCGACAGCAGACTTGCATGGTCGGACGAAGAA
TTTGATGAATGGCGGTTATCCGAAATTGGCGCGAAAGCACTCGAGGATGG
CTCGCCCGAAGCTCTGGCATCAAGCTATCCCGACGCTTCCACGGACGCCG
ATGGCGACACCGCCATGGATGACAACAACGAAGATGACTTCGAGAAACTC
TCACGTGGTGTCTGTACTAAGAAGCGTTGCGAGAGACATAAACAATGGCT
CAAGGTCCAACAGCAAGATGCTGTATTCGAGGAAAACACCCTCGCTCTGG
ATCTAAGCAAATGCGAGAAGGAAGCGAAGAATGTCGTGGAGAGGGCCGTT
CTTAGGATGTGGGCCGAATCAGACAATGCGCAAATTGGTGGCCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005977-T1.utr5p1 | KJC3_005977-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR019786 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001965 |
| DBxref | PFAM:PF00628 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4304431..4307595 + |
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