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KJC3_005982-T1, KJC3_005982-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005982-T1
Unique NameKJC3_005982-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4315341..4316152-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005982-T1 ID=KJC3_005982-T1|Name=KJC3_005982-T1|organism=Aspergillus niger KJC3|type=mRNA|length=812bp|location=Sequence derived from alignment at ch4:4315341..4316152- (Aspergillus niger KJC3)
ATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACGAAGGA
GATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCAGTAAGT
TTGATCCTCGATCTCCGTCCACCCATCGACTATGGCAATGTAAAAACTAA
CATGTTGCGTTAGCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGT
CACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGA
ATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCC
CTCTGGAGACACTACTATTCTGGTACTTTTCCCCTTATCGCGTATTTTCA
ACGAATCGTGGGGCAAGTGGCTGACATTGGGTGAAATCTTCAGGTACACA
AGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTCGTTTGGAGGAGG
CTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAAATGAAGGATGCT
CTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGGCCGTAAGTTTCC
ACCTTTAGGTTATAGATATCGACGTCGCGACTGACCAGGATTTTTCTTGC
AGACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTAAGTTACACGCCCCCTCATTATTGCTTTGCCAT
CTAACGATCGATTGTCGCAGGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAA
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Coding sequence (CDS) from alignment at ch4:4315341..4316152-

>KJC3_005982-T1 ID=KJC3_005982-T1|Name=KJC3_005982-T1|organism=Aspergillus niger KJC3|type=CDS|length=2775bp|location=Sequence derived from alignment at ch4:4315341..4316152- (Aspergillus niger KJC3)
GCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACATGAGT
CCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGATAAGCT
GTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTTCGAGG
GCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTC
GTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAA
ATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGG
CCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCC
CTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTC
AATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACA
CTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTT
GGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAA
GACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACA
TGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGAT
AAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTT
CGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACAC
TGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATC
GCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTT
CAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCAC
TATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGA
AGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGG
AGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGA
TTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCT
GGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAAT
AAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGC
GACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAA
CGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGG
ATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTC
ACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAA
TGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCC
TCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGG
GAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATG
CTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCA
GAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAA
GTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAA
CTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACT
CCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATT
ATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAA
GCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGG
ACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTAT
AAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAG
ACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATT
ATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTT
GGATGCTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTC
ACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGA
GGGAACTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGT
GGACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACA
AGATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCC
AATAAGCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAA
TCAGGACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCA
CCTATAAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAG
ATCAGACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCA
AGATTATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTG
GGTTTGGATGCTGCTGGAAAGACCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARF6KJC3_005982Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005982-T1KJC3_005982-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005982-T1.cdsKJC3_005982-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005982-T1.exon5KJC3_005982-T1.exon5Aspergillus niger KJC3exon
KJC3_005982-T1.exon4KJC3_005982-T1.exon4Aspergillus niger KJC3exon
KJC3_005982-T1.exon3KJC3_005982-T1.exon3Aspergillus niger KJC3exon
KJC3_005982-T1.exon2KJC3_005982-T1.exon2Aspergillus niger KJC3exon
KJC3_005982-T1.exon1KJC3_005982-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041838
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Product Arf Arf6
ProductADP-ribosylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4315341..4316152 -
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