|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4334275..4335956+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005990-T1 ID=KJC3_005990-T1|Name=KJC3_005990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1682bp|location=Sequence derived from alignment at ch4:4334275..4335956+ (Aspergillus niger KJC3)
TATCTTTTCTTAGTTAAATTTACACCACAGCAATCACAATGGCTCCCCCA
GCTGTGTTGATGGTACGTCCTCCCTTCCGTTCATCGCATATTCCCCACTA
ACCAGCAAACCAGGTAGGAACAGGCGAGTACACGACCGGCTACGTCGGTG
GTACAGCCTCGACCTCCGACAAGAAAGTGGGTGTCGTGGGCCTAACGCTC
TTCGACTTGCGTCGTCGCGGCAAAGTTGGCGATTTGAGCATGGTGGGCGT
ATCTGGATCCAAATTCCCTGGAATCCGTAAGCCACACCCTCGTTTCCCTT
CGTACTCAGCAATTCGCCAAAACTGACCGAGAGAAACCAAGGCGCACACT
TGCAGAAGAATATCTCCGAAGTCTACAACGGCCTTGATGTCTCCTTCACC
TCCTTTCCCGCCGACAACACCTCCGACCCAGAAGCCTACAAAGCTGCCAT
TGACGCCCTTCCCGCCGGCTCTGCAATCACCATTTTCACACCCGACCCCA
CCCATTACCCTATCGCTCTGTACGCCATTCAGCGCAAGATCCACGTTCTC
ATCACTAAGCCCGCGACCAAGCTCCTCTCTGACCACCTCGATTTGCTCGC
TGAGTCTCGCAAGCACAATGTCGTTGTGTACATTGAACACCACAAGCGCT
TCGACCCGGCCTACAGTGACGCCCGCGCTAAGGCTGCCAAGCTTGGTGAC
TTCAACTACTTTTACAGCTACATGAGTCAGCCCAAGAGCCAGCTGGAGAC
GTTCAAGGCCTGGGCTGGTAAGGACTCGGATATCTCTTATTATTTGAACA
GCCACCACGTGGATGTTAATGAGAGCATGGTGCCGGACTATGTCCCCGTG
AAGGTGACGGCTAGTGCAGCGACGGGAACTGCTGTCGAGCTGGGCTGTGC
CCATGAGACGGAGGACACGATTACTCTACTTGTGGAATGGAAGAAGAAGG
ATGGATCAAGAATGGCTACGGGTGTTTACACATCTAGTTGGACCGCACCA
CAGAGGGCCGGTGTACACTCTAACCAGTACTTCCATTGTAGGTCGCTTCT
CGGGGTCGATGTTGTTGGCTCATAGAGTGAATGATGCTAACAAGTGCAGA
TATGGGCTCGAAGGGTGAAATCCGTGTCAATCAGGCGAAGCGTGGCTATG
ATGTTGCCGAGGATGAGGCTGGATTGTCTTGGATTAACCCGTACGTTTCT
AATTCCCTCGGCGTTGGCTTGGATTTCACGCTTACTAATAGTTGCGCAGG
TTCTATATGAAGTACGCACCAGACGAGGAGGGTAACTTCGGTGGTCAGAC
GGGCTACGGATACATCAGTTTCGAGAAGTTCATTGATGCCGTTACGGCTG
TTAATGAGGGGCGGTTGACGCTCGATCAGCTGGATGCCAGGCCGATCCCG
ACGCTGAAGAACACTATTGCCACGACGGCAATCCTGCATGCAGGACGCAT
TTCCTTGGATGAGAAGCGGTCGGTGGAGATCGTGACCGAGGATGGAAAGT
GGGAGCTGAAGTAGATACCTTAGAGAAGCTTGTATGTAATTACTTTGTTA
TGTATGGCTGTATGACCGTTTATGATTCTGGTCCATCTGTTGCGGTGAAC
ATGCAGGTTTGCGACAACTGTTCCTCAAAGCTTAATGCTGCAGCTGTGCT
GACCCCTTGGCCTTGAGTATTGACAAAGGGGC back to topCoding sequence (CDS) from alignment at ch4:4334275..4335956+ >KJC3_005990-T1 ID=KJC3_005990-T1|Name=KJC3_005990-T1|organism=Aspergillus niger KJC3|type=CDS|length=6195bp|location=Sequence derived from alignment at ch4:4334275..4335956+ (Aspergillus niger KJC3)
ATGGCTCCCCCAGCTGTGTTGATGGTAGGAACAGGCGAGTACACGACCGG
CTACGTCGGTGGTACAGCCTCGACCTCCGACAAGAAAGTGGGTGTCGTGG
GCCTAACGCTCTTCGACTTGCGTCGTCGCGGCAAAGTTGGCGATTTGAGC
ATGGTGGGCGTATCTGGATCCAAATTCCCTGGAATCCGCGCACACTTGCA
GAAGAATATCTCCGAAGTCTACAACGGCCTTGATGTCTCCTTCACCTCCT
TTCCCGCCGACAACACCTCCGACCCAGAAGCCTACAAAGCTGCCATTGAC
GCCCTTCCCGCCGGCTCTGCAATCACCATTTTCACACCCGACCCCACCCA
TTACCCTATCGCTCTGTACGCCATTCAGCGCAAGATCCACGTTCTCATCA
CTAAGCCCGCGACCAAGCTCCTCTCTGACCACCTCGATTTGCTCGCTGAG
TCTCGCAAGCACAATGTCGTTGTGTACATTGAACACCACAAGCGCTTCGA
CCCGGCCTACAGTGACGCCCGCGCTAAGGCTGCCAAGCTTGGTGACTTCA
ACTACTTTTACAGCTACATGAGTCAGCCCAAGAGCCAGCTGGAGACGTTC
AAGGCCTGGGCTGGTAAGGACTCGGATATCTCTTATTATTTGAACAGCCA
CCACGTGGATGTTAATGAGAGCATGGTGCCGGACTATGTCCCCGTGAAGG
TGACGGCTAGTGCAGCGACGGGAACTGCTGTCGAGCTGGGCTGTGCCCAT
GAGACGGAGGACACGATTACTCTACTTGTGGAATGGAAGAAGAAGGATGG
ATCAAGAATGGCTACGGGTGTTTACACATCTAGTTGGACCGCACCACAGA
GGGCCGGTGTACACTCTAACCAGTACTTCCATTATATGGGCTCGAAGGGT
GAAATCCGTGTCAATCAGGCGAAGCGTGGCTATGATGTTGCCGAGGATGA
GGCTGGATTGTCTTGGATTAACCCGTTCTATATGAAGTACGCACCAGACG
AGGAGGGTAACTTCGGTGGTCAGACGGGCTACGGATACATCAGTTTCGAG
AAGTTCATTGATGCCGTTACGGCTGTTAATGAGGGGCGGTTGACGCTCGA
TCAGCTGGATGCCAGGCCGATCCCGACGCTGAAGAACACTATTGCCACGA
CGGCAATCCTGCATGCAGGACGCATTTCCTTGGATGAGAAGCGGTCGGTG
GAGATCGTGACCGAGGATGGAAAGTGGGAGCTGAAGTAGATGGCTCCCCC
AGCTGTGTTGATGGTAGGAACAGGCGAGTACACGACCGGCTACGTCGGTG
GTACAGCCTCGACCTCCGACAAGAAAGTGGGTGTCGTGGGCCTAACGCTC
TTCGACTTGCGTCGTCGCGGCAAAGTTGGCGATTTGAGCATGGTGGGCGT
ATCTGGATCCAAATTCCCTGGAATCCGCGCACACTTGCAGAAGAATATCT
CCGAAGTCTACAACGGCCTTGATGTCTCCTTCACCTCCTTTCCCGCCGAC
AACACCTCCGACCCAGAAGCCTACAAAGCTGCCATTGACGCCCTTCCCGC
CGGCTCTGCAATCACCATTTTCACACCCGACCCCACCCATTACCCTATCG
CTCTGTACGCCATTCAGCGCAAGATCCACGTTCTCATCACTAAGCCCGCG
ACCAAGCTCCTCTCTGACCACCTCGATTTGCTCGCTGAGTCTCGCAAGCA
CAATGTCGTTGTGTACATTGAACACCACAAGCGCTTCGACCCGGCCTACA
GTGACGCCCGCGCTAAGGCTGCCAAGCTTGGTGACTTCAACTACTTTTAC
AGCTACATGAGTCAGCCCAAGAGCCAGCTGGAGACGTTCAAGGCCTGGGC
TGGTAAGGACTCGGATATCTCTTATTATTTGAACAGCCACCACGTGGATG
TTAATGAGAGCATGGTGCCGGACTATGTCCCCGTGAAGGTGACGGCTAGT
GCAGCGACGGGAACTGCTGTCGAGCTGGGCTGTGCCCATGAGACGGAGGA
CACGATTACTCTACTTGTGGAATGGAAGAAGAAGGATGGATCAAGAATGG
CTACGGGTGTTTACACATCTAGTTGGACCGCACCACAGAGGGCCGGTGTA
CACTCTAACCAGTACTTCCATTATATGGGCTCGAAGGGTGAAATCCGTGT
CAATCAGGCGAAGCGTGGCTATGATGTTGCCGAGGATGAGGCTGGATTGT
CTTGGATTAACCCGTTCTATATGAAGTACGCACCAGACGAGGAGGGTAAC
TTCGGTGGTCAGACGGGCTACGGATACATCAGTTTCGAGAAGTTCATTGA
TGCCGTTACGGCTGTTAATGAGGGGCGGTTGACGCTCGATCAGCTGGATG
CCAGGCCGATCCCGACGCTGAAGAACACTATTGCCACGACGGCAATCCTG
CATGCAGGACGCATTTCCTTGGATGAGAAGCGGTCGGTGGAGATCGTGAC
CGAGGATGGAAAGTGGGAGCTGAAGTAGATGGCTCCCCCAGCTGTGTTGA
TGGTAGGAACAGGCGAGTACACGACCGGCTACGTCGGTGGTACAGCCTCG
ACCTCCGACAAGAAAGTGGGTGTCGTGGGCCTAACGCTCTTCGACTTGCG
TCGTCGCGGCAAAGTTGGCGATTTGAGCATGGTGGGCGTATCTGGATCCA
AATTCCCTGGAATCCGCGCACACTTGCAGAAGAATATCTCCGAAGTCTAC
AACGGCCTTGATGTCTCCTTCACCTCCTTTCCCGCCGACAACACCTCCGA
CCCAGAAGCCTACAAAGCTGCCATTGACGCCCTTCCCGCCGGCTCTGCAA
TCACCATTTTCACACCCGACCCCACCCATTACCCTATCGCTCTGTACGCC
ATTCAGCGCAAGATCCACGTTCTCATCACTAAGCCCGCGACCAAGCTCCT
CTCTGACCACCTCGATTTGCTCGCTGAGTCTCGCAAGCACAATGTCGTTG
TGTACATTGAACACCACAAGCGCTTCGACCCGGCCTACAGTGACGCCCGC
GCTAAGGCTGCCAAGCTTGGTGACTTCAACTACTTTTACAGCTACATGAG
TCAGCCCAAGAGCCAGCTGGAGACGTTCAAGGCCTGGGCTGGTAAGGACT
CGGATATCTCTTATTATTTGAACAGCCACCACGTGGATGTTAATGAGAGC
ATGGTGCCGGACTATGTCCCCGTGAAGGTGACGGCTAGTGCAGCGACGGG
AACTGCTGTCGAGCTGGGCTGTGCCCATGAGACGGAGGACACGATTACTC
TACTTGTGGAATGGAAGAAGAAGGATGGATCAAGAATGGCTACGGGTGTT
TACACATCTAGTTGGACCGCACCACAGAGGGCCGGTGTACACTCTAACCA
GTACTTCCATTATATGGGCTCGAAGGGTGAAATCCGTGTCAATCAGGCGA
AGCGTGGCTATGATGTTGCCGAGGATGAGGCTGGATTGTCTTGGATTAAC
CCGTTCTATATGAAGTACGCACCAGACGAGGAGGGTAACTTCGGTGGTCA
GACGGGCTACGGATACATCAGTTTCGAGAAGTTCATTGATGCCGTTACGG
CTGTTAATGAGGGGCGGTTGACGCTCGATCAGCTGGATGCCAGGCCGATC
CCGACGCTGAAGAACACTATTGCCACGACGGCAATCCTGCATGCAGGACG
CATTTCCTTGGATGAGAAGCGGTCGGTGGAGATCGTGACCGAGGATGGAA
AGTGGGAGCTGAAGTAGATGGCTCCCCCAGCTGTGTTGATGGTAGGAACA
GGCGAGTACACGACCGGCTACGTCGGTGGTACAGCCTCGACCTCCGACAA
GAAAGTGGGTGTCGTGGGCCTAACGCTCTTCGACTTGCGTCGTCGCGGCA
AAGTTGGCGATTTGAGCATGGTGGGCGTATCTGGATCCAAATTCCCTGGA
ATCCGCGCACACTTGCAGAAGAATATCTCCGAAGTCTACAACGGCCTTGA
TGTCTCCTTCACCTCCTTTCCCGCCGACAACACCTCCGACCCAGAAGCCT
ACAAAGCTGCCATTGACGCCCTTCCCGCCGGCTCTGCAATCACCATTTTC
ACACCCGACCCCACCCATTACCCTATCGCTCTGTACGCCATTCAGCGCAA
GATCCACGTTCTCATCACTAAGCCCGCGACCAAGCTCCTCTCTGACCACC
TCGATTTGCTCGCTGAGTCTCGCAAGCACAATGTCGTTGTGTACATTGAA
CACCACAAGCGCTTCGACCCGGCCTACAGTGACGCCCGCGCTAAGGCTGC
CAAGCTTGGTGACTTCAACTACTTTTACAGCTACATGAGTCAGCCCAAGA
GCCAGCTGGAGACGTTCAAGGCCTGGGCTGGTAAGGACTCGGATATCTCT
TATTATTTGAACAGCCACCACGTGGATGTTAATGAGAGCATGGTGCCGGA
CTATGTCCCCGTGAAGGTGACGGCTAGTGCAGCGACGGGAACTGCTGTCG
AGCTGGGCTGTGCCCATGAGACGGAGGACACGATTACTCTACTTGTGGAA
TGGAAGAAGAAGGATGGATCAAGAATGGCTACGGGTGTTTACACATCTAG
TTGGACCGCACCACAGAGGGCCGGTGTACACTCTAACCAGTACTTCCATT
ATATGGGCTCGAAGGGTGAAATCCGTGTCAATCAGGCGAAGCGTGGCTAT
GATGTTGCCGAGGATGAGGCTGGATTGTCTTGGATTAACCCGTTCTATAT
GAAGTACGCACCAGACGAGGAGGGTAACTTCGGTGGTCAGACGGGCTACG
GATACATCAGTTTCGAGAAGTTCATTGATGCCGTTACGGCTGTTAATGAG
GGGCGGTTGACGCTCGATCAGCTGGATGCCAGGCCGATCCCGACGCTGAA
GAACACTATTGCCACGACGGCAATCCTGCATGCAGGACGCATTTCCTTGG
ATGAGAAGCGGTCGGTGGAGATCGTGACCGAGGATGGAAAGTGGGAGCTG
AAGTAGATGGCTCCCCCAGCTGTGTTGATGGTAGGAACAGGCGAGTACAC
GACCGGCTACGTCGGTGGTACAGCCTCGACCTCCGACAAGAAAGTGGGTG
TCGTGGGCCTAACGCTCTTCGACTTGCGTCGTCGCGGCAAAGTTGGCGAT
TTGAGCATGGTGGGCGTATCTGGATCCAAATTCCCTGGAATCCGCGCACA
CTTGCAGAAGAATATCTCCGAAGTCTACAACGGCCTTGATGTCTCCTTCA
CCTCCTTTCCCGCCGACAACACCTCCGACCCAGAAGCCTACAAAGCTGCC
ATTGACGCCCTTCCCGCCGGCTCTGCAATCACCATTTTCACACCCGACCC
CACCCATTACCCTATCGCTCTGTACGCCATTCAGCGCAAGATCCACGTTC
TCATCACTAAGCCCGCGACCAAGCTCCTCTCTGACCACCTCGATTTGCTC
GCTGAGTCTCGCAAGCACAATGTCGTTGTGTACATTGAACACCACAAGCG
CTTCGACCCGGCCTACAGTGACGCCCGCGCTAAGGCTGCCAAGCTTGGTG
ACTTCAACTACTTTTACAGCTACATGAGTCAGCCCAAGAGCCAGCTGGAG
ACGTTCAAGGCCTGGGCTGGTAAGGACTCGGATATCTCTTATTATTTGAA
CAGCCACCACGTGGATGTTAATGAGAGCATGGTGCCGGACTATGTCCCCG
TGAAGGTGACGGCTAGTGCAGCGACGGGAACTGCTGTCGAGCTGGGCTGT
GCCCATGAGACGGAGGACACGATTACTCTACTTGTGGAATGGAAGAAGAA
GGATGGATCAAGAATGGCTACGGGTGTTTACACATCTAGTTGGACCGCAC
CACAGAGGGCCGGTGTACACTCTAACCAGTACTTCCATTATATGGGCTCG
AAGGGTGAAATCCGTGTCAATCAGGCGAAGCGTGGCTATGATGTTGCCGA
GGATGAGGCTGGATTGTCTTGGATTAACCCGTTCTATATGAAGTACGCAC
CAGACGAGGAGGGTAACTTCGGTGGTCAGACGGGCTACGGATACATCAGT
TTCGAGAAGTTCATTGATGCCGTTACGGCTGTTAATGAGGGGCGGTTGAC
GCTCGATCAGCTGGATGCCAGGCCGATCCCGACGCTGAAGAACACTATTG
CCACGACGGCAATCCTGCATGCAGGACGCATTTCCTTGGATGAGAAGCGG
TCGGTGGAGATCGTGACCGAGGATGGAAAGTGGGAGCTGAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005990-T1.utr5p1 | KJC3_005990-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005990-T1.utr3p1 | KJC3_005990-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR000683 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4334275..4335956 + |
|
