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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4352901..4355742- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005997-T1 ID=KJC3_005997-T1|Name=KJC3_005997-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2842bp|location=Sequence derived from alignment at ch4:4352901..4355742- (Aspergillus niger KJC3)
CTCCACTTCTCCCTCGCCCTCCCACATCACTCCGGACTTTCCCTCCCTTT
CTTCCATCCCGGAATCAGTCCAGTCTTGCTCCTCGTATCGTGATCAGCTT
GAGAGCTCGTCCTGATTGCTCTTACCGCAGCAATCAACCCTCAAGCTTTT
GTTGCCTTAACTTTCTCTTTGGTGGACCAAGCCTGGTAGGTTTCATATTT
GTTAGCTCATTGTTGGCGCCCTCTAGCAACGCTCCCCCTCCCTCTTACTC
CGCGCAACTGGCGGGCCTACCTGGGTTTCGCGCAGACGAAGGGACCCGTC
GATTGACTCACTCTGGCGAACACATCGCTTTCTTGAAATTGACAAGCCCC
TAGGCCTCGTCCTTCGCCGTGAACCGGCCATCCCACCCCCCGACGAGGGC
TGTCGGTAGCAGGCCAAACACACTACGAACCCTGACCGCCTCCACCACCC
ACAACTAGCTCTCCTAGGGACGATTCCACACACTCTCGCCCTCCCTCTCT
TGCCCCTCCGTTCTTTCACTTCCAGCTGGGTGAAACGCTAGCTTCAAAAT
TACTCACGACACACCTCTCGACGCCGCGAACCGCATCTTTGCCCCGCCAT
GCCCTGTTTCAAGGGTCTCGCCGTGAGTATACACACTCCGGACGGACCTA
TCTCCGAATACTCCATTCAGCGCCAGTCCCGGGCATCTCGCATAGCTTGC
TACATCCCCGTACCACCACCCAAGATCCCCGAATCCGGATCCGGGCGCCC
TGAGCAATCGACGTTCGCTATCTCCATCACCCTTCTAAACCCCGGCCAAG
ACGTCCCATACTCCGCCCCGAAACCGACCCCGGACAACCCCGCACCCAAA
CCGAAGGTAGTTGGTGGGCTACCCGGGTCTACCGGGGAGCGTGGCCAGTA
CAGCAGCACGGTTGCTCCGTACCAAGCATTGACCAATTCGGCAAATGAAA
CGGTCGCCGCCTACATCTACTTTGATGGCCGGGCCAAGGAGGAGGTGGCC
ACACTGCTGCGGAGAGGTGAAGAAACATGGGTTAATTCTCGATGGGTCAG
TGTACCGGCATCAGAGGGCGGGGGTCTCGCTGAACGGGAGTTTCTCTTCC
GTGAAGTCGGGCTAGAAAGATGGCTGAACGGCTTGGATTTGGAAGGGAAA
GACGCTGCCGCCAAGATTGAGCGCCGACGACAAAAGATGGAGAAGCGCCG
AATTAAGCGTGAAGCAGCTGGCGATCTGGATATGGAAGCAAAGTCGGGCA
AAGGAGTCATGCGCTACGGCAACGATGCAAAGTCTCCGCTAGAGGATGTG
TCGGACGACGACATGTCGTTCTCCGATTCGGACGATGACCCGATCCCCGA
ATCCGCAGGTCAGATTAAGGTGGCTTTGTTTCGCGTCCTGGCGTCTGGGG
AAATCAAGCGCGGGGAGTACTCACCACAGTTCGACGCTCACGATGATGAT
GACGAAACCCAGGGCGAGAATGGACATAAAGGGGCAGCTGATGCGGACAT
TGATCACACAACGAGCTTTGCGAAGCCAAAAACACTCGACCCTAAGACGA
TTAGCACGCAGACCGTGACAGGCATCGATCCGTCCGACAAACCCTACGCT
ATTTTCACATTCATGTACCGTGGCGAGCGTGAGTTTATCCCCTTTGGTTC
TCTGTAGATTCATCGACTGATTAGGTCACAGGTCAATTGCAAAAGATGGG
AATCTTGAGGGACCCCAAGGCGCAAGAAACTCCCGGGTCCGCAAAGCGTC
GGTCTTTGCAGCCAGACTTCGCCAATCTCGGTCCCCTGAAACCCGGCGGC
ACGGTCGGATTTGTGAACTTCCGCGACAACACAGAAAGAAAGAAAGGCAA
GAAATCTGGTGAGGATGACGAGATGGACAGTGAAGACGATGAGGACAATT
CAATTCTCGGTAAAGCAGATGAAGAAGAGGGCAAAGAAGATGATCTCCAT
TTGTCTCCGGACGATATCCGACGGCAAGGGGAGCTCGCGGAAAGCATACG
CAAAATCAAGGTTCGTCAGGAACTAATTCTCAAGTCTCTACCACCGACTG
ACTGTTGTACACAGCTTAAACGTCAGCATTCGTCTGCCTCGTTAGCTACG
AATACCCCCCCAGCCGAGAGTGCGAGTCCCAATACAGCCGGGGACACGCC
TGTAACCAACAATCCGTCCACTACTCCGCCCGCTGTTGCTGCAGCTACGG
CCGCTGAAACCCCCAAGCCGGCCACTAACACGCTGAACGGAGGTTTTATT
GGCAGTCCATTGAAGAAGCAGCGGGCGAGCGTCTCGCATTCAGATGAAGA
CGCCATGCGTCGACGAATGGAGTCGGGGCTTTCCCAGGAGATCACGAATG
TTGGCCCAGGCGACAGTACAAAGGCAGCCAACCCTCCTGAGACACACCCG
CAAAAACCGCAGGAGACCGAAGATGAGGAACTATAGCCGGTTGCTCCAAA
CTCCTATCATCCATGCCCATATTTAGCGATACAGATGTCTACCCACATCT
TTTTCAATTCTCCTCTTCTTTTCTTCTTCACCTCAGACGCCACGATGGAC
TGGTGTGTGAAGGCGCGCCAGACAGCTGTGTCAGACCGCAGCACCATCTA
CACTCTGATTTCATCTTTTCCTCAATTTTTATTTACCCTCCCAACTACAG
TTGACATCTACGGTTTGGATATGGCCCATTTCTGACGAAATCATCATGAC
TAAGTAGCTTTACCTTTCTTCATTTTCATATCCAACTCTCTCAGTTCCGT
GGGCGGCTGGGCGATTGATTCTCTAGCTAGAACGGAGGGCAGGCGAAGGT
AATTGATATAGACGCAATGAGTCACGCAAGTTGCATTTAGCG back to topCoding sequence (CDS) from alignment at ch4:4352901..4355742- >KJC3_005997-T1 ID=KJC3_005997-T1|Name=KJC3_005997-T1|organism=Aspergillus niger KJC3|type=CDS|length=5193bp|location=Sequence derived from alignment at ch4:4352901..4355742- (Aspergillus niger KJC3)
CTTAAACGTCAGCATTCGTCTGCCTCGTTAGCTACGAATACCCCCCCAGC
CGAGAGTGCGAGTCCCAATACAGCCGGGGACACGCCTGTAACCAACAATC
CGTCCACTACTCCGCCCGCTGTTGCTGCAGCTACGGCCGCTGAAACCCCC
AAGCCGGCCACTAACACGCTGAACGGAGGTTTTATTGGCAGTCCATTGAA
GAAGCAGCGGGCGAGCGTCTCGCATTCAGATGAAGACGCCATGCGTCGAC
GAATGGAGTCGGGGCTTTCCCAGGAGATCACGAATGTTGGCCCAGGCGAC
AGTACAAAGGCAGCCAACCCTCCTGAGACACACCCGCAAAAACCGCAGGA
GACCGAAGATGAGGAACTATAGGTCAATTGCAAAAGATGGGAATCTTGAG
GGACCCCAAGGCGCAAGAAACTCCCGGGTCCGCAAAGCGTCGGTCTTTGC
AGCCAGACTTCGCCAATCTCGGTCCCCTGAAACCCGGCGGCACGGTCGGA
TTTGTGAACTTCCGCGACAACACAGAAAGAAAGAAAGGCAAGAAATCTGG
TGAGGATGACGAGATGGACAGTGAAGACGATGAGGACAATTCAATTCTCG
GTAAAGCAGATGAAGAAGAGGGCAAAGAAGATGATCTCCATTTGTCTCCG
GACGATATCCGACGGCAAGGGGAGCTCGCGGAAAGCATACGCAAAATCAA
GATGCCCTGTTTCAAGGGTCTCGCCGTGAGTATACACACTCCGGACGGAC
CTATCTCCGAATACTCCATTCAGCGCCAGTCCCGGGCATCTCGCATAGCT
TGCTACATCCCCGTACCACCACCCAAGATCCCCGAATCCGGATCCGGGCG
CCCTGAGCAATCGACGTTCGCTATCTCCATCACCCTTCTAAACCCCGGCC
AAGACGTCCCATACTCCGCCCCGAAACCGACCCCGGACAACCCCGCACCC
AAACCGAAGGTAGTTGGTGGGCTACCCGGGTCTACCGGGGAGCGTGGCCA
GTACAGCAGCACGGTTGCTCCGTACCAAGCATTGACCAATTCGGCAAATG
AAACGGTCGCCGCCTACATCTACTTTGATGGCCGGGCCAAGGAGGAGGTG
GCCACACTGCTGCGGAGAGGTGAAGAAACATGGGTTAATTCTCGATGGGT
CAGTGTACCGGCATCAGAGGGCGGGGGTCTCGCTGAACGGGAGTTTCTCT
TCCGTGAAGTCGGGCTAGAAAGATGGCTGAACGGCTTGGATTTGGAAGGG
AAAGACGCTGCCGCCAAGATTGAGCGCCGACGACAAAAGATGGAGAAGCG
CCGAATTAAGCGTGAAGCAGCTGGCGATCTGGATATGGAAGCAAAGTCGG
GCAAAGGAGTCATGCGCTACGGCAACGATGCAAAGTCTCCGCTAGAGGAT
GTGTCGGACGACGACATGTCGTTCTCCGATTCGGACGATGACCCGATCCC
CGAATCCGCAGGTCAGATTAAGGTGGCTTTGTTTCGCGTCCTGGCGTCTG
GGGAAATCAAGCGCGGGGAGTACTCACCACAGTTCGACGCTCACGATGAT
GATGACGAAACCCAGGGCGAGAATGGACATAAAGGGGCAGCTGATGCGGA
CATTGATCACACAACGAGCTTTGCGAAGCCAAAAACACTCGACCCTAAGA
CGATTAGCACGCAGACCGTGACAGGCATCGATCCGTCCGACAAACCCTAC
GCTATTTTCACATTCATGTACCGTGGCGAGCCTTAAACGTCAGCATTCGT
CTGCCTCGTTAGCTACGAATACCCCCCCAGCCGAGAGTGCGAGTCCCAAT
ACAGCCGGGGACACGCCTGTAACCAACAATCCGTCCACTACTCCGCCCGC
TGTTGCTGCAGCTACGGCCGCTGAAACCCCCAAGCCGGCCACTAACACGC
TGAACGGAGGTTTTATTGGCAGTCCATTGAAGAAGCAGCGGGCGAGCGTC
TCGCATTCAGATGAAGACGCCATGCGTCGACGAATGGAGTCGGGGCTTTC
CCAGGAGATCACGAATGTTGGCCCAGGCGACAGTACAAAGGCAGCCAACC
CTCCTGAGACACACCCGCAAAAACCGCAGGAGACCGAAGATGAGGAACTA
TAGGTCAATTGCAAAAGATGGGAATCTTGAGGGACCCCAAGGCGCAAGAA
ACTCCCGGGTCCGCAAAGCGTCGGTCTTTGCAGCCAGACTTCGCCAATCT
CGGTCCCCTGAAACCCGGCGGCACGGTCGGATTTGTGAACTTCCGCGACA
ACACAGAAAGAAAGAAAGGCAAGAAATCTGGTGAGGATGACGAGATGGAC
AGTGAAGACGATGAGGACAATTCAATTCTCGGTAAAGCAGATGAAGAAGA
GGGCAAAGAAGATGATCTCCATTTGTCTCCGGACGATATCCGACGGCAAG
GGGAGCTCGCGGAAAGCATACGCAAAATCAAGATGCCCTGTTTCAAGGGT
CTCGCCGTGAGTATACACACTCCGGACGGACCTATCTCCGAATACTCCAT
TCAGCGCCAGTCCCGGGCATCTCGCATAGCTTGCTACATCCCCGTACCAC
CACCCAAGATCCCCGAATCCGGATCCGGGCGCCCTGAGCAATCGACGTTC
GCTATCTCCATCACCCTTCTAAACCCCGGCCAAGACGTCCCATACTCCGC
CCCGAAACCGACCCCGGACAACCCCGCACCCAAACCGAAGGTAGTTGGTG
GGCTACCCGGGTCTACCGGGGAGCGTGGCCAGTACAGCAGCACGGTTGCT
CCGTACCAAGCATTGACCAATTCGGCAAATGAAACGGTCGCCGCCTACAT
CTACTTTGATGGCCGGGCCAAGGAGGAGGTGGCCACACTGCTGCGGAGAG
GTGAAGAAACATGGGTTAATTCTCGATGGGTCAGTGTACCGGCATCAGAG
GGCGGGGGTCTCGCTGAACGGGAGTTTCTCTTCCGTGAAGTCGGGCTAGA
AAGATGGCTGAACGGCTTGGATTTGGAAGGGAAAGACGCTGCCGCCAAGA
TTGAGCGCCGACGACAAAAGATGGAGAAGCGCCGAATTAAGCGTGAAGCA
GCTGGCGATCTGGATATGGAAGCAAAGTCGGGCAAAGGAGTCATGCGCTA
CGGCAACGATGCAAAGTCTCCGCTAGAGGATGTGTCGGACGACGACATGT
CGTTCTCCGATTCGGACGATGACCCGATCCCCGAATCCGCAGGTCAGATT
AAGGTGGCTTTGTTTCGCGTCCTGGCGTCTGGGGAAATCAAGCGCGGGGA
GTACTCACCACAGTTCGACGCTCACGATGATGATGACGAAACCCAGGGCG
AGAATGGACATAAAGGGGCAGCTGATGCGGACATTGATCACACAACGAGC
TTTGCGAAGCCAAAAACACTCGACCCTAAGACGATTAGCACGCAGACCGT
GACAGGCATCGATCCGTCCGACAAACCCTACGCTATTTTCACATTCATGT
ACCGTGGCGAGCCTTAAACGTCAGCATTCGTCTGCCTCGTTAGCTACGAA
TACCCCCCCAGCCGAGAGTGCGAGTCCCAATACAGCCGGGGACACGCCTG
TAACCAACAATCCGTCCACTACTCCGCCCGCTGTTGCTGCAGCTACGGCC
GCTGAAACCCCCAAGCCGGCCACTAACACGCTGAACGGAGGTTTTATTGG
CAGTCCATTGAAGAAGCAGCGGGCGAGCGTCTCGCATTCAGATGAAGACG
CCATGCGTCGACGAATGGAGTCGGGGCTTTCCCAGGAGATCACGAATGTT
GGCCCAGGCGACAGTACAAAGGCAGCCAACCCTCCTGAGACACACCCGCA
AAAACCGCAGGAGACCGAAGATGAGGAACTATAGGTCAATTGCAAAAGAT
GGGAATCTTGAGGGACCCCAAGGCGCAAGAAACTCCCGGGTCCGCAAAGC
GTCGGTCTTTGCAGCCAGACTTCGCCAATCTCGGTCCCCTGAAACCCGGC
GGCACGGTCGGATTTGTGAACTTCCGCGACAACACAGAAAGAAAGAAAGG
CAAGAAATCTGGTGAGGATGACGAGATGGACAGTGAAGACGATGAGGACA
ATTCAATTCTCGGTAAAGCAGATGAAGAAGAGGGCAAAGAAGATGATCTC
CATTTGTCTCCGGACGATATCCGACGGCAAGGGGAGCTCGCGGAAAGCAT
ACGCAAAATCAAGATGCCCTGTTTCAAGGGTCTCGCCGTGAGTATACACA
CTCCGGACGGACCTATCTCCGAATACTCCATTCAGCGCCAGTCCCGGGCA
TCTCGCATAGCTTGCTACATCCCCGTACCACCACCCAAGATCCCCGAATC
CGGATCCGGGCGCCCTGAGCAATCGACGTTCGCTATCTCCATCACCCTTC
TAAACCCCGGCCAAGACGTCCCATACTCCGCCCCGAAACCGACCCCGGAC
AACCCCGCACCCAAACCGAAGGTAGTTGGTGGGCTACCCGGGTCTACCGG
GGAGCGTGGCCAGTACAGCAGCACGGTTGCTCCGTACCAAGCATTGACCA
ATTCGGCAAATGAAACGGTCGCCGCCTACATCTACTTTGATGGCCGGGCC
AAGGAGGAGGTGGCCACACTGCTGCGGAGAGGTGAAGAAACATGGGTTAA
TTCTCGATGGGTCAGTGTACCGGCATCAGAGGGCGGGGGTCTCGCTGAAC
GGGAGTTTCTCTTCCGTGAAGTCGGGCTAGAAAGATGGCTGAACGGCTTG
GATTTGGAAGGGAAAGACGCTGCCGCCAAGATTGAGCGCCGACGACAAAA
GATGGAGAAGCGCCGAATTAAGCGTGAAGCAGCTGGCGATCTGGATATGG
AAGCAAAGTCGGGCAAAGGAGTCATGCGCTACGGCAACGATGCAAAGTCT
CCGCTAGAGGATGTGTCGGACGACGACATGTCGTTCTCCGATTCGGACGA
TGACCCGATCCCCGAATCCGCAGGTCAGATTAAGGTGGCTTTGTTTCGCG
TCCTGGCGTCTGGGGAAATCAAGCGCGGGGAGTACTCACCACAGTTCGAC
GCTCACGATGATGATGACGAAACCCAGGGCGAGAATGGACATAAAGGGGC
AGCTGATGCGGACATTGATCACACAACGAGCTTTGCGAAGCCAAAAACAC
TCGACCCTAAGACGATTAGCACGCAGACCGTGACAGGCATCGATCCGTCC
GACAAACCCTACGCTATTTTCACATTCATGTACCGTGGCGAGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005997-T1.utr3p1 | KJC3_005997-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4352901..4355742 - |
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