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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4355821..4358964- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005998-T2 ID=KJC3_005998-T2|Name=KJC3_005998-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3144bp|location=Sequence derived from alignment at ch4:4355821..4358964- (Aspergillus niger KJC3)
AGAACACATATGCGGGGGATCTAAAGTCACGTGCGAGTACCAACCAAAGG
CCCGGTTCCGAGATGGCCGATCGATGCGTGATATCAATCTTCCTTCGAAG
GCCAATGCCTTGGGAATGTCATTGTTTATGTCTTAACGGTGTGACAATGT
TCTTATTAAGATTGATATGATATGGACTTTCTACAGCAGTCCCCACCGTC
TGCGCAGGACCTCTTGCGCACCGGAGAGCCGTTCGTCCCGTTTTCCGAGT
ATTCTGTTCAGGACATCACCCATCTATCAGAAGATGAAACCACAGGATGG
GTGGAGACCAAACTCCGTGATGGAAAGCCATTTGTTATACGTGGGTTTTC
TCATCTGAAAGAATGGGATAGGTCGATCTTGAACAATGAGAGACTTGGCA
GCCTCTCTTCCTCAGCAGGTATGTCCACGACCTTAGAGCTTGAAAAGTGT
AGCCGTTGACATTTTCACTCGTGAATAGCGATACCGGTAAGAAACTGCCA
CACAGGGAGAGATGCGAAAATGCGGCTTCAAGATCTCCTTTCGCAGACAG
AATGTGCTCGTGCCGGCAATGTCCGAGAGTTGTACGTTAGACAATACGAT
TCCGAGCGTTGGCCTCTTTGACTGATAGGCAAGCTAGTTTGTACGCAAAA
GATCTTCAGTGCCCACAAGCGTGGATCAAAGCACTAGAGGCATTTCTTCC
TTCAGCTATGCGGCACCTTGGGTCTCTTGATTTATTCCGGATGTTGCCAA
AGGAGACGGCTCCGGAGGTTCTGATGGCGTATGTTGGGACTCGGAAATCT
TCGTGAGTCTCTGCTGCCTTCCATGCGGTGATATCCACTAACTTTCTGTA
ATGGGGTAGCTCAGGATTTCACAGATGCTTTAGCGGAACAGTTGCTTTGA
ATCTATTAGTTGAATCAGAAGGTGAATACTTAACGAGACATATCTGACAT
TCACGACAAACGTTCTGATAGTTCGGCTAGGCGCTGGCCCTGGGTCTCTC
TGCTTTGGGACTGATAAAATTTCACAAGCCGCGTACGACACATATATGGA
GAGACTGGGGAAGTCTCCCCATACCGATTGGACCGACGTTTCTACTACCC
AGCTCAAGTCTGCCGATTTCCCCATATACGTTACCCACCAGCACCCTGGA
GACTTGGTAATATTTCCTTCAGCTACCGCCCATCAGATTTGGAACATCAG
TTCAATGGTTACAAAGGTAGTTTGGAATGTCATGCATAGCTCTTCGCTTG
TCTCTTTCTTCGACTACATCCAGCCATTCTACCAGCGATATTGCCATGCA
GACACTGGCCGAGTCCCTTTAATCCCGTTACATGCATTAATCCGAGGGTC
GCTAGGAACGGAGGACGAAGCACTTCTTCTGGACGTCTTTCTGAAATTGC
TCGATGACGAAGCTATTGAGACTGATTCGGACCCTCCAATGAAGATTGTG
GATACCCAGGGGGCCGTGGTAGAATGTAATTTCTGCGGCTTGACGATATG
GAATCGGCATTTGCACTGCGAGCAGTGCGGCGACTTTGACTTATGTCTGA
CATGCTTTATTACTGGACGCAGCTGCAAACACGTCGCTGACTATACATGG
GCCGAACTAATTCCGCGTGCCTACTGCATGGAGGTTATCCAGTCGACACG
GAACAGACTTCGTGATCGATTACTCTCCCGATTCAAACGTCCAAAGTATG
ACCTTCCCTTCAAGCATCCAGGCTTAATTAGCCTCAAACTGTGTGCCTTG
TTTCGACGTCAAGAATTTTAAGTTTCTATGTAACCACGAGTATGTCTCTA
ATTCTACTTCCAGGCAAAAATCTCTGGGCGCCTTGGCTGCTGCTGCGGCA
GATGCACGGAAACAACCGATGATGGTACGAAATCACCCCAGTATTTCTTT
TTGGCTTGGCTTTGAAGGAGCGCAGACTAAATGGACCAGGAGCGACTTTG
TCACTTGTGTCGTGATAGTCATCCCGCCTGGAAAGGGGTGGCATGTACCC
AATGCTCCGCATTTTTCTGCTTCCGGGGCCTCCATCGACACTTTGACGTG
GATTTGATACCCTTTCTGAGGAACACAGATCCATGGGTATGTCCAAAGTG
CTCCCATTTCTGCAATTGCCGGTGCTGTCACTTTCCTCTCCCTTACTCTA
GTAAAGACAAGCCTGTGCGGGCTCGGATCAAGTCGATTGATCCTCGCGGA
CGCATCATGGGGTTCACCGACAACGTGTTTGATCAAAAACGAGGCAAAAG
AGCTAGCATGGCTGCTCATAGCGCATCCCTCCCGCCTGAAGTGCCTTCTC
GGGCACATAAACGACCGAGAAACCAGGTTAGCGATGAAGAGACGGAACTG
CCACGACAGCAGGAAGGCTCTAGTACTTTTACAAATCGTGGTATAATACA
GTCGCATAGTACAGAGGATACTATTCACTCAAGCCCTCGTCCCTATGTGA
TGTCCTCACGGAGTATAGGCCCGAAAGGGCAGCTCCGTATCAGTGACCTC
GTTGAGAAACATAGCCCTGCTGAAGCTGAACCTCCCTTTCCGGCTCCATT
TAGGCACGCTTCCCCTCTACTTTCCCTGACGCCAGGAGATGGCGCATTCC
GACGGCCGGCCAATGAGCCGAGTGTTCCAGCCACTACAGATGAAGCCAGC
ATCTCCTTTCTCGAAAGAAAATTGGAGGAGCTTCGTCGATATGCCGATGA
ACTTCTGGATCTTTCCCTAGTGGACTCACATGCGAAGGTTCTGGAGAAGA
TCGGTCAGTTGCAGGGTCAGATCGAAGAGCGCAAGCGACGGAAAGCGGAG
GCACTGTTCGACAGCCTCGATCGGGATTTCCCAGAACTTGCCACGGTTGC
GAGAGAGGAAGCACGAAGACGAGGACTGTAAATCGGGATCTAGCTTATAT
AATTATTCGTGAAGAGCGAAGCCGATAAACACTGGCCCACTAACCCAGGA
TTAAACAAGGAAGTCAGTAGTTGTAGGCTAGGATTTGCAGGTGAGAGGTA
GGATGTATAAAACCCTGATGCTACCTTGAGAGACACCAAGAAGTACCCCT
GTAACAAGAGATCTTCAGCAAATAATCAAAGTTTACCAATGACCTGCAGA
AACATTTAATTCTAGGCTGCGTGAGTGAGGCCCCTGGAAAGAAG back to topCoding sequence (CDS) from alignment at ch4:4355821..4358964- >KJC3_005998-T2 ID=KJC3_005998-T2|Name=KJC3_005998-T2|organism=Aspergillus niger KJC3|type=CDS|length=4959bp|location=Sequence derived from alignment at ch4:4355821..4358964- (Aspergillus niger KJC3)
GAGCGACTTTGTCACTTGTGTCGTGATAGTCATCCCGCCTGGAAAGGGGT
GGCATGTACCCAATGCTCCGCATTTTTCTGCTTCCGGGGCCTCCATCGAC
ACTTTGACGTGGATTTGATACCCTTTCTGAGGAACACAGATCCATGGGTA
TGTCCAAAGTGCTCCCATTTCTGCAATTGCCGGTGCTGTCACTTTCCTCT
CCCTTACTCTAGTAAAGACAAGCCTGTGCGGGCTCGGATCAAGTCGATTG
ATCCTCGCGGACGCATCATGGGGTTCACCGACAACGTGTTTGATCAAAAA
CGAGGCAAAAGAGCTAGCATGGCTGCTCATAGCGCATCCCTCCCGCCTGA
AGTGCCTTCTCGGGCACATAAACGACCGAGAAACCAGGTTAGCGATGAAG
AGACGGAACTGCCACGACAGCAGGAAGGCTCTAGTACTTTTACAAATCGT
GGTATAATACAGTCGCATAGTACAGAGGATACTATTCACTCAAGCCCTCG
TCCCTATGTGATGTCCTCACGGAGTATAGGCCCGAAAGGGCAGCTCCGTA
TCAGTGACCTCGTTGAGAAACATAGCCCTGCTGAAGCTGAACCTCCCTTT
CCGGCTCCATTTAGGCACGCTTCCCCTCTACTTTCCCTGACGCCAGGAGA
TGGCGCATTCCGACGGCCGGCCAATGAGCCGAGTGTTCCAGCCACTACAG
ATGAAGCCAGCATCTCCTTTCTCGAAAGAAAATTGGAGGAGCTTCGTCGA
TATGCCGATGAACTTCTGGATCTTTCCCTAGTGGACTCACATGCGAAGGT
TCTGGAGAAGATCGGTCAGTTGCAGGGTCAGATCGAAGAGCGCAAGCGAC
GGAAAGCGGAGGCACTGTTCGACAGCCTCGATCGGGATTTCCCAGAACTT
GCCACGGTTGCGAGAGAGGAAGCACGAAGACGAGGACTGTAAGCAAAAAT
CTCTGGGCGCCTTGGCTGCTGCTGCGGCAGATGCACGGAAACAACCGATG
ATGATGGAGAGACTGGGGAAGTCTCCCCATACCGATTGGACCGACGTTTC
TACTACCCAGCTCAAGTCTGCCGATTTCCCCATATACGTTACCCACCAGC
ACCCTGGAGACTTGGTAATATTTCCTTCAGCTACCGCCCATCAGATTTGG
AACATCAGTTCAATGGTTACAAAGGTAGTTTGGAATGTCATGCATAGCTC
TTCGCTTGTCTCTTTCTTCGACTACATCCAGCCATTCTACCAGCGATATT
GCCATGCAGACACTGGCCGAGTCCCTTTAATCCCGTTACATGCATTAATC
CGAGGGTCGCTAGGAACGGAGGACGAAGCACTTCTTCTGGACGTCTTTCT
GAAATTGCTCGATGACGAAGCTATTGAGACTGATTCGGACCCTCCAATGA
AGATTGTGGATACCCAGGGGGCCGTGGTAGAATGTAATTTCTGCGGCTTG
ACGATATGGAATCGGCATTTGCACTGCGAGCAGTGCGGCGACTTTGACTT
ATGTCTGACATGCTTTATTACTGGACGCAGCTGCAAACACGTCGCTGACT
ATACATGGGCCGAACTAATTCCGCGTGCCTACTGCATGGAGGTTATCCAG
TCGACACGGAACAGACTTCGTGATCGATTACTCTCCCGATTCAAACGTCC
AAAGAGCGACTTTGTCACTTGTGTCGTGATAGTCATCCCGCCTGGAAAGG
GGTGGCATGTACCCAATGCTCCGCATTTTTCTGCTTCCGGGGCCTCCATC
GACACTTTGACGTGGATTTGATACCCTTTCTGAGGAACACAGATCCATGG
GTATGTCCAAAGTGCTCCCATTTCTGCAATTGCCGGTGCTGTCACTTTCC
TCTCCCTTACTCTAGTAAAGACAAGCCTGTGCGGGCTCGGATCAAGTCGA
TTGATCCTCGCGGACGCATCATGGGGTTCACCGACAACGTGTTTGATCAA
AAACGAGGCAAAAGAGCTAGCATGGCTGCTCATAGCGCATCCCTCCCGCC
TGAAGTGCCTTCTCGGGCACATAAACGACCGAGAAACCAGGTTAGCGATG
AAGAGACGGAACTGCCACGACAGCAGGAAGGCTCTAGTACTTTTACAAAT
CGTGGTATAATACAGTCGCATAGTACAGAGGATACTATTCACTCAAGCCC
TCGTCCCTATGTGATGTCCTCACGGAGTATAGGCCCGAAAGGGCAGCTCC
GTATCAGTGACCTCGTTGAGAAACATAGCCCTGCTGAAGCTGAACCTCCC
TTTCCGGCTCCATTTAGGCACGCTTCCCCTCTACTTTCCCTGACGCCAGG
AGATGGCGCATTCCGACGGCCGGCCAATGAGCCGAGTGTTCCAGCCACTA
CAGATGAAGCCAGCATCTCCTTTCTCGAAAGAAAATTGGAGGAGCTTCGT
CGATATGCCGATGAACTTCTGGATCTTTCCCTAGTGGACTCACATGCGAA
GGTTCTGGAGAAGATCGGTCAGTTGCAGGGTCAGATCGAAGAGCGCAAGC
GACGGAAAGCGGAGGCACTGTTCGACAGCCTCGATCGGGATTTCCCAGAA
CTTGCCACGGTTGCGAGAGAGGAAGCACGAAGACGAGGACTGTAAGCAAA
AATCTCTGGGCGCCTTGGCTGCTGCTGCGGCAGATGCACGGAAACAACCG
ATGATGATGGAGAGACTGGGGAAGTCTCCCCATACCGATTGGACCGACGT
TTCTACTACCCAGCTCAAGTCTGCCGATTTCCCCATATACGTTACCCACC
AGCACCCTGGAGACTTGGTAATATTTCCTTCAGCTACCGCCCATCAGATT
TGGAACATCAGTTCAATGGTTACAAAGGTAGTTTGGAATGTCATGCATAG
CTCTTCGCTTGTCTCTTTCTTCGACTACATCCAGCCATTCTACCAGCGAT
ATTGCCATGCAGACACTGGCCGAGTCCCTTTAATCCCGTTACATGCATTA
ATCCGAGGGTCGCTAGGAACGGAGGACGAAGCACTTCTTCTGGACGTCTT
TCTGAAATTGCTCGATGACGAAGCTATTGAGACTGATTCGGACCCTCCAA
TGAAGATTGTGGATACCCAGGGGGCCGTGGTAGAATGTAATTTCTGCGGC
TTGACGATATGGAATCGGCATTTGCACTGCGAGCAGTGCGGCGACTTTGA
CTTATGTCTGACATGCTTTATTACTGGACGCAGCTGCAAACACGTCGCTG
ACTATACATGGGCCGAACTAATTCCGCGTGCCTACTGCATGGAGGTTATC
CAGTCGACACGGAACAGACTTCGTGATCGATTACTCTCCCGATTCAAACG
TCCAAAGAGCGACTTTGTCACTTGTGTCGTGATAGTCATCCCGCCTGGAA
AGGGGTGGCATGTACCCAATGCTCCGCATTTTTCTGCTTCCGGGGCCTCC
ATCGACACTTTGACGTGGATTTGATACCCTTTCTGAGGAACACAGATCCA
TGGGTATGTCCAAAGTGCTCCCATTTCTGCAATTGCCGGTGCTGTCACTT
TCCTCTCCCTTACTCTAGTAAAGACAAGCCTGTGCGGGCTCGGATCAAGT
CGATTGATCCTCGCGGACGCATCATGGGGTTCACCGACAACGTGTTTGAT
CAAAAACGAGGCAAAAGAGCTAGCATGGCTGCTCATAGCGCATCCCTCCC
GCCTGAAGTGCCTTCTCGGGCACATAAACGACCGAGAAACCAGGTTAGCG
ATGAAGAGACGGAACTGCCACGACAGCAGGAAGGCTCTAGTACTTTTACA
AATCGTGGTATAATACAGTCGCATAGTACAGAGGATACTATTCACTCAAG
CCCTCGTCCCTATGTGATGTCCTCACGGAGTATAGGCCCGAAAGGGCAGC
TCCGTATCAGTGACCTCGTTGAGAAACATAGCCCTGCTGAAGCTGAACCT
CCCTTTCCGGCTCCATTTAGGCACGCTTCCCCTCTACTTTCCCTGACGCC
AGGAGATGGCGCATTCCGACGGCCGGCCAATGAGCCGAGTGTTCCAGCCA
CTACAGATGAAGCCAGCATCTCCTTTCTCGAAAGAAAATTGGAGGAGCTT
CGTCGATATGCCGATGAACTTCTGGATCTTTCCCTAGTGGACTCACATGC
GAAGGTTCTGGAGAAGATCGGTCAGTTGCAGGGTCAGATCGAAGAGCGCA
AGCGACGGAAAGCGGAGGCACTGTTCGACAGCCTCGATCGGGATTTCCCA
GAACTTGCCACGGTTGCGAGAGAGGAAGCACGAAGACGAGGACTGTAAGC
AAAAATCTCTGGGCGCCTTGGCTGCTGCTGCGGCAGATGCACGGAAACAA
CCGATGATGATGGAGAGACTGGGGAAGTCTCCCCATACCGATTGGACCGA
CGTTTCTACTACCCAGCTCAAGTCTGCCGATTTCCCCATATACGTTACCC
ACCAGCACCCTGGAGACTTGGTAATATTTCCTTCAGCTACCGCCCATCAG
ATTTGGAACATCAGTTCAATGGTTACAAAGGTAGTTTGGAATGTCATGCA
TAGCTCTTCGCTTGTCTCTTTCTTCGACTACATCCAGCCATTCTACCAGC
GATATTGCCATGCAGACACTGGCCGAGTCCCTTTAATCCCGTTACATGCA
TTAATCCGAGGGTCGCTAGGAACGGAGGACGAAGCACTTCTTCTGGACGT
CTTTCTGAAATTGCTCGATGACGAAGCTATTGAGACTGATTCGGACCCTC
CAATGAAGATTGTGGATACCCAGGGGGCCGTGGTAGAATGTAATTTCTGC
GGCTTGACGATATGGAATCGGCATTTGCACTGCGAGCAGTGCGGCGACTT
TGACTTATGTCTGACATGCTTTATTACTGGACGCAGCTGCAAACACGTCG
CTGACTATACATGGGCCGAACTAATTCCGCGTGCCTACTGCATGGAGGTT
ATCCAGTCGACACGGAACAGACTTCGTGATCGATTACTCTCCCGATTCAA
ACGTCCAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005998-T2.utr3p1 | KJC3_005998-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005998-T2.utr5p1 | KJC3_005998-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003347 |
| DBxref | InterPro:IPR018866 |
| DBxref | InterPro:IPR043145 |
| DBxref | InterPro:IPR000433 |
| DBxref | PFAM:PF00569 |
| DBxref | PFAM:PF10497 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4355821..4358964 - |
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