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KJC3_006011-T1, KJC3_006011-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006011-T1
Unique NameKJC3_006011-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4394235..4397346+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006011-T1 ID=KJC3_006011-T1|Name=KJC3_006011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3112bp|location=Sequence derived from alignment at ch4:4394235..4397346+ (Aspergillus niger KJC3)
CACCGGGCACCCCCGCACATCATTGTTTCTCGTGGGATTCGATCGGAGTT
CGTGCTCTTCACCTAACTTGCCATGTACTCGCAGTGGTTGTCAGCTTGAT
AATACGCTTGCTTCGTTACACTGAGCCTCGCCATGCATGCTATTACAGGA
GGCAGCAAGGGATCCGCGTGCTCTATCGACAGGAGTGAGCCCTTCAAGCT
TGCAACCATCCCAGTCTTCTAAGACTACAGCTTTGCGGACTACGAGGACT
GCCACTGGGAACTTTTCGTTGATCCTCAGATCTGCGGAATAGTTGATCCA
TAGTGAAATCCAAAAAAGTAATGTGGGGATCATGAACCGCCGTGGGAAAC
GCCGATGTCTCCCGTCGGTGCGCTGAGCATGGCGGGTGCTCGGCGCTGAG
AAACATCCGAGAATACCAAGGAAAACAGAGAAGCAGCCCTGCTACCGCCC
ATCCAACGAGAAGTCTTCCATTGCGGCTACCGCGTCGAACAGGTTCGTCG
AATATTCTCGTGTTTGGCATGCACCGGAGTGGGATACCAGCCGCCTCATT
ACTCTATTTCGGTGAGAACGCTGTCATTGGCGGCCCCCCTCCTGTCTACC
TGAAATTACCCCATGCCCTCTCCACACCCTCGGTTGTATGGGGGAACTAC
TGCTGACGGTTATCCCGCTCTTAGCCATCGACAACTGATAAATCTCCCCT
CTGATCCCATGGATCCCTGAAGCCTGTGTATATGTGAAAGGATACAAGTG
CAGGAGGGAAAATTTCGGCTTGGCTCGTCTTCTTGGCACCGGAGTTCCGT
GTCTGTTTGAACTACGCAGCTTCATGGCACATCTTTCGATGGATCAACCA
TAGCATTGACGTCGACGACCGCTTCTCTCCGAATCCCAATCCTCCTCTCC
TCAGCTACACCGTCTGGCACATATAAGGTGCGATGCAGGAAAAATCGAGC
ACTGTCGCCGCTTACGCGGCCGGAGCATCTCTTGCGGCTATTGCTTTATT
CTACGTCTTCGGCCCCAACTACACTATCGATGGAGACGAGTCACAGGACA
GTTCCCGCAAGAAAAACATTGTTGGCTTGTCCAACCCCGCCAATGACTGC
TTCATCAACTCGGTGCTGCAGGCTCTTGCAGGGCTCGGTGATCTGCGTGT
CTACCTGATCAGAGAGCTCCACAAGCGTGAACTAGACGGTTCTGATATAT
ATAATGAACTTCCTCCACCGGCTGATATGCCTCGGGATGCGAAGCCGGAC
AGGATAAGGGAATTGCAACAGGGGAGTATTACCAGAGCTCTCAAGGAGAT
GCTCGACCGACTGAACGAACGCCCGATCTACAAGAAAACCATCTCCGCGC
GACCCTTCATCCAGTCTCTTGAGTACGCCTATCGGACGCGGATCAGCCGT
AGCCAGCAAGATGCGCAGGAGTTCTTGCAGATTGTCGCAGAAAGACTTTG
CGATGAGTACCATGCCGGCGTGAAAGCACGACTACGAGCGAAGGCCATAC
CAGAGTTGTCGTCAGGCCCGGAGGCGGTAAAATCAGGCGATGAATCTTCT
CCCAAAGTCCCTGCGGAAGTTGAGGTGCGGATTGATGACGGATCTGAGAA
CGGCTTACCCGCTATTATCGACAATAAACTCAAAGAAATCGACCATGAGT
ACGGCTTCCCTTTCGAAGGAAAGCTCGAGTCCCAGATCGAGTGCCTGTTT
TGCCACTATCAATACAAGCCTAATCAGACCTCCTTTGTAAATCTGACCTT
GCAAGTGCCTCAAAAGAGCTCTACGACGCTTAGCGCCTGCTTTGACGGTT
TACTCAAAACTGAATACATTGAAGACTTCAAATGCGACAAATGTCGATTG
CAGCATGCTCTTGAGTTCAAGACGCAGGAATTGCACCGGACCCGCTCCAA
AGATGACCGAGCTAGGTTTGAGTCAGAAATTGAGCGAATCCAGACGGCCC
TCGCTACAAATCCAGAAGGTCCTTTAGAGGGTGTAATCTTGCCACCTTCT
GACCTCGCCCCTAAACGAAAGATTGCGAGACATATGCGGATAACGGCCTT
TCCCAAAATCATTGCCATTCATCTTTCGCGATCGATCTTTGACCACAGCA
GCTCTTCCAAGAATGCAGCCAAAGTATCTTTTCCGGAGCGGCTGCCGCTC
GGTGGTATCCTGAGTCGAGAATGGTACAGGCTGCTGGCAATTGTCTGTCA
TAAAGGCAGCCACCATAGCGGACATTACGAGTCATTTCGACGTAATCACC
TTTATCCACCCTTCTCAACGCCAGATGTATTCAGCTCGTACGCTCAGAGT
CGGGCAACTAGCGAAAACCCATCCGAAGCGCCGAGCCCTCAGCTAAAGGC
TCGCAACTCGTTCGAGAGCGAACCGGCGCCCCTCAGCATCTCGACATCGA
TAGGGTCACCGACCAGTCCCTCTCAGCTGCAACCGCCCCCGTCACCGACT
CCTCGACCGACATCGAGCCCACGGGTTTCTTTCCAGAGCACTCGCTCGAA
GTCGTCAGCATCTAAGCAGAACCTATCGCCCGTGTCAGACCCGCACAGCT
CATCCTCCACAGAGGGTGGGCGCTGGAGCAAGTCATTTTCGCGCGCGTCG
TTCACCAGCGATCGCAGTACGCCAGCAACTTCGGTTGAAGCTTCAGGCTC
CAGCAGTCGGCTCCGTCGACGCCGTAAGCAGAACGATCGATGGTGGCGTG
TCTCGGACGAGAAAGTCAAAGAATGCAAGACTTCCGATGTTTTGGGGATG
CAGCGAGAGGTCTACCTCTTGTTCTATGAGATTGAGAAGCCCACGCTTGG
CGCGTAAGCGGCCTTCAATATCACTTTTGGTTTTTTTCTTTTGGATATAG
GAGAGAAAAGGAACGATCGCATACTGGATAGATAGAGGAGTACCTCGGGG
GTTTATACAAGCCCATTTCACCGACCCATGTAAGGAGCCTTCTCGCGCAG
CGGCTCAGGAATGACAGTTATGCACAAGGAACATCAAAACCATATTAGAC
AGTACACAATACTAGACACATGCACGAGTCCTACATTTGCGAGATAGTAA
AACCCCCGTTCACATCACGGAAATCTCCATCCTACTACGATCTAGTAACA
CTCAGATTCCCG
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Coding sequence (CDS) from alignment at ch4:4394235..4397346+

>KJC3_006011-T1 ID=KJC3_006011-T1|Name=KJC3_006011-T1|organism=Aspergillus niger KJC3|type=CDS|length=1875bp|location=Sequence derived from alignment at ch4:4394235..4397346+ (Aspergillus niger KJC3)
ATGCAGGAAAAATCGAGCACTGTCGCCGCTTACGCGGCCGGAGCATCTCT
TGCGGCTATTGCTTTATTCTACGTCTTCGGCCCCAACTACACTATCGATG
GAGACGAGTCACAGGACAGTTCCCGCAAGAAAAACATTGTTGGCTTGTCC
AACCCCGCCAATGACTGCTTCATCAACTCGGTGCTGCAGGCTCTTGCAGG
GCTCGGTGATCTGCGTGTCTACCTGATCAGAGAGCTCCACAAGCGTGAAC
TAGACGGTTCTGATATATATAATGAACTTCCTCCACCGGCTGATATGCCT
CGGGATGCGAAGCCGGACAGGATAAGGGAATTGCAACAGGGGAGTATTAC
CAGAGCTCTCAAGGAGATGCTCGACCGACTGAACGAACGCCCGATCTACA
AGAAAACCATCTCCGCGCGACCCTTCATCCAGTCTCTTGAGTACGCCTAT
CGGACGCGGATCAGCCGTAGCCAGCAAGATGCGCAGGAGTTCTTGCAGAT
TGTCGCAGAAAGACTTTGCGATGAGTACCATGCCGGCGTGAAAGCACGAC
TACGAGCGAAGGCCATACCAGAGTTGTCGTCAGGCCCGGAGGCGGTAAAA
TCAGGCGATGAATCTTCTCCCAAAGTCCCTGCGGAAGTTGAGGTGCGGAT
TGATGACGGATCTGAGAACGGCTTACCCGCTATTATCGACAATAAACTCA
AAGAAATCGACCATGAGTACGGCTTCCCTTTCGAAGGAAAGCTCGAGTCC
CAGATCGAGTGCCTGTTTTGCCACTATCAATACAAGCCTAATCAGACCTC
CTTTGTAAATCTGACCTTGCAAGTGCCTCAAAAGAGCTCTACGACGCTTA
GCGCCTGCTTTGACGGTTTACTCAAAACTGAATACATTGAAGACTTCAAA
TGCGACAAATGTCGATTGCAGCATGCTCTTGAGTTCAAGACGCAGGAATT
GCACCGGACCCGCTCCAAAGATGACCGAGCTAGGTTTGAGTCAGAAATTG
AGCGAATCCAGACGGCCCTCGCTACAAATCCAGAAGGTCCTTTAGAGGGT
GTAATCTTGCCACCTTCTGACCTCGCCCCTAAACGAAAGATTGCGAGACA
TATGCGGATAACGGCCTTTCCCAAAATCATTGCCATTCATCTTTCGCGAT
CGATCTTTGACCACAGCAGCTCTTCCAAGAATGCAGCCAAAGTATCTTTT
CCGGAGCGGCTGCCGCTCGGTGGTATCCTGAGTCGAGAATGGTACAGGCT
GCTGGCAATTGTCTGTCATAAAGGCAGCCACCATAGCGGACATTACGAGT
CATTTCGACGTAATCACCTTTATCCACCCTTCTCAACGCCAGATGTATTC
AGCTCGTACGCTCAGAGTCGGGCAACTAGCGAAAACCCATCCGAAGCGCC
GAGCCCTCAGCTAAAGGCTCGCAACTCGTTCGAGAGCGAACCGGCGCCCC
TCAGCATCTCGACATCGATAGGGTCACCGACCAGTCCCTCTCAGCTGCAA
CCGCCCCCGTCACCGACTCCTCGACCGACATCGAGCCCACGGGTTTCTTT
CCAGAGCACTCGCTCGAAGTCGTCAGCATCTAAGCAGAACCTATCGCCCG
TGTCAGACCCGCACAGCTCATCCTCCACAGAGGGTGGGCGCTGGAGCAAG
TCATTTTCGCGCGCGTCGTTCACCAGCGATCGCAGTACGCCAGCAACTTC
GGTTGAAGCTTCAGGCTCCAGCAGTCGGCTCCGTCGACGCCGTAAGCAGA
ACGATCGATGGTGGCGTGTCTCGGACGAGAAAGTCAAAGAATGCAAGACT
TCCGATGTTTTGGGGATGCAGCGAGAGGTCTACCTCTTGTTCTATGAGAT
TGAGAAGCCCACGCTTGGCGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBP16KJC3_006011Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006011-T1.utr5p1KJC3_006011-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006011-T1.exon1KJC3_006011-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006011-T1.cdsKJC3_006011-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006011-T1.utr3p1KJC3_006011-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006011-T1KJC3_006011-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteMEROPS:MER0005855
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR018200
DBxrefInterPro:IPR001394
DBxrefPFAM:PF13423
DBxrefPFAM:PF00443
Productubiquitin-specific protease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4394235..4397346 +
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