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KJC3_006022-T1, KJC3_006022-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006022-T1
Unique NameKJC3_006022-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4422787..4423902-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006022-T1 ID=KJC3_006022-T1|Name=KJC3_006022-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1116bp|location=Sequence derived from alignment at ch4:4422787..4423902- (Aspergillus niger KJC3)
TCCATTCAAGCTGGGCTTTTCCAATCACACGATCATTTCCCCGACTTGCC
ACGAGGTCGTGTTCTATGACATCTGAAAAGGTCCGTCCCCTGCCTCACCT
GAACCCAGGTGAGGTATCGTTGTTGGATCTCGCGACCGACGACCCTCGCG
ATACCGTAACTTTGTCCGACAAAGAGGCCTTGATCCTGCAGCTGTATCGG
CAGATCCAGGAACAGCGATTGGAGAAAGCGCTACTAGAACAAGGTCGGTG
TCCATGTTGCTAGAGCAACAAACTATCATTTGTACTTGATCTAGAACTAA
TCATTATGCCTTATACAGACACGGATTTGCTATCTGGAGACAATGCTGAA
GAGCAACTAGCCGTCGCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACTTA
TACAGTCAGGAGGAAAGCTGTTGGCACAGTTCTTATGACTGATCCCATCC
TCAAGGCTGTTCATCTGAAAGCGTCGACGCCAGCTGAACAGTAAGTTTAC
TAATCGTCTTCTGCATATAATTTTCTTGATTCTTGCGCCTTTTGCATTAT
TTGCTGGTTTTCCTATTTTTGGAGTGCTTCAATTATCTTCTCCTTACTTA
CCAGAAACAGGGCCCTCCTACGGCTCATTAATCGTCGCGACATGCTATCT
TTAGCGCATGAAAATCTGAATACTGCACACAATGCAACTCTTCGAAGGCT
TTCAAGCCTGGAGGTGGAAAATTCACAGATCCACCAGCAAAACCAAGAGT
TAGTCCGTGAGCTGTTAGCCCTTACGGTAGATGATGAATCATGGAGAGAG
AATCTGGAAGATGCGGAGCTCAAGGCCCAGCTAGATCAACTAGATGCGGA
TCGCAGGAAAAGCAAAGCTAAATGGGAAACCATGAAAAACATCGCAAGCG
GGATGGTTGTCGGTAGTGGAGTGAACTGGGCTGAAGACGAGAGGCTCACG
GCTCTGGTCCTTGACGAATCTGATGATTGATGTAGTGGGTTGGTATATTG
CAGTACTTGGATAGGCGTTATGAGATATACCCTTGAACCGAATTATAGAC
GACATGAAATATCTATTATGTCTCCCTCACTCGTTGAGGGTAAATTGAGT
TTGTGATTGATCAAAT
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Coding sequence (CDS) from alignment at ch4:4422787..4423902-

>KJC3_006022-T1 ID=KJC3_006022-T1|Name=KJC3_006022-T1|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch4:4422787..4423902- (Aspergillus niger KJC3)
GGCCCTCCTACGGCTCATTAATCGTCGCGACATGCTATCTTTAGCGCATG
AAAATCTGAATACTGCACACAATGCAACTCTTCGAAGGCTTTCAAGCCTG
GAGGTGGAAAATTCACAGATCCACCAGCAAAACCAAGAGTTAGTCCGTGA
GCTGTTAGCCCTTACGGTAGATGATGAATCATGGAGAGAGAATCTGGAAG
ATGCGGAGCTCAAGGCCCAGCTAGATCAACTAGATGCGGATCGCAGGAAA
AGCAAAGCTAAATGGGAAACCATGAAAAACATCGCAAGCGGGATGGTTGT
CGGTAGTGGAGTGAACTGGGCTGAAGACGAGAGGCTCACGGCTCTGGTCC
TTGACGAATCTGATGATTGAACACGGATTTGCTATCTGGAGACAATGCTG
AAGAGCAACTAGCCGTCGCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACT
TATACAGTCAGGAGGAAAGCTGTTGGCACAGTTCTTATGACTGATCCCAT
CCTCAAGGCTGTTCATCTGAAAGCGTCGACGCCAGCTGAACAATGACATC
TGAAAAGGTCCGTCCCCTGCCTCACCTGAACCCAGGTGAGGTATCGTTGT
TGGATCTCGCGACCGACGACCCTCGCGATACCGTAACTTTGTCCGACAAA
GAGGCCTTGATCCTGCAGCTGTATCGGCAGATCCAGGAACAGCGATTGGA
GAAAGCGCTACTAGAACAAGGGCCCTCCTACGGCTCATTAATCGTCGCGA
CATGCTATCTTTAGCGCATGAAAATCTGAATACTGCACACAATGCAACTC
TTCGAAGGCTTTCAAGCCTGGAGGTGGAAAATTCACAGATCCACCAGCAA
AACCAAGAGTTAGTCCGTGAGCTGTTAGCCCTTACGGTAGATGATGAATC
ATGGAGAGAGAATCTGGAAGATGCGGAGCTCAAGGCCCAGCTAGATCAAC
TAGATGCGGATCGCAGGAAAAGCAAAGCTAAATGGGAAACCATGAAAAAC
ATCGCAAGCGGGATGGTTGTCGGTAGTGGAGTGAACTGGGCTGAAGACGA
GAGGCTCACGGCTCTGGTCCTTGACGAATCTGATGATTGAACACGGATTT
GCTATCTGGAGACAATGCTGAAGAGCAACTAGCCGTCGCCGAGCGTGAGC
TTCTGGAAGCTAGGGCGACTTATACAGTCAGGAGGAAAGCTGTTGGCACA
GTTCTTATGACTGATCCCATCCTCAAGGCTGTTCATCTGAAAGCGTCGAC
GCCAGCTGAACAATGACATCTGAAAAGGTCCGTCCCCTGCCTCACCTGAA
CCCAGGTGAGGTATCGTTGTTGGATCTCGCGACCGACGACCCTCGCGATA
CCGTAACTTTGTCCGACAAAGAGGCCTTGATCCTGCAGCTGTATCGGCAG
ATCCAGGAACAGCGATTGGAGAAAGCGCTACTAGAACAAGGGCCCTCCTA
CGGCTCATTAATCGTCGCGACATGCTATCTTTAGCGCATGAAAATCTGAA
TACTGCACACAATGCAACTCTTCGAAGGCTTTCAAGCCTGGAGGTGGAAA
ATTCACAGATCCACCAGCAAAACCAAGAGTTAGTCCGTGAGCTGTTAGCC
CTTACGGTAGATGATGAATCATGGAGAGAGAATCTGGAAGATGCGGAGCT
CAAGGCCCAGCTAGATCAACTAGATGCGGATCGCAGGAAAAGCAAAGCTA
AATGGGAAACCATGAAAAACATCGCAAGCGGGATGGTTGTCGGTAGTGGA
GTGAACTGGGCTGAAGACGAGAGGCTCACGGCTCTGGTCCTTGACGAATC
TGATGATTGAACACGGATTTGCTATCTGGAGACAATGCTGAAGAGCAACT
AGCCGTCGCCGAGCGTGAGCTTCTGGAAGCTAGGGCGACTTATACAGTCA
GGAGGAAAGCTGTTGGCACAGTTCTTATGACTGATCCCATCCTCAAGGCT
GTTCATCTGAAAGCGTCGACGCCAGCTGAACAATGACATCTGAAAAGGTC
CGTCCCCTGCCTCACCTGAACCCAGGTGAGGTATCGTTGTTGGATCTCGC
GACCGACGACCCTCGCGATACCGTAACTTTGTCCGACAAAGAGGCCTTGA
TCCTGCAGCTGTATCGGCAGATCCAGGAACAGCGATTGGAGAAAGCGCTA
CTAGAACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
Vocabulary: Biological Process
TermDefinition
GO:0051382kinetochore assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006022KJC3_006022Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006022-T1KJC3_006022-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006022-T1.cdsKJC3_006022-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006022-T1.utr3p1KJC3_006022-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006022-T1.exon3KJC3_006022-T1.exon3Aspergillus niger KJC3exon
KJC3_006022-T1.exon2KJC3_006022-T1.exon2Aspergillus niger KJC3exon
KJC3_006022-T1.exon1KJC3_006022-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006022-T1.utr5p1KJC3_006022-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008426
DBxrefPFAM:PF05837
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4422787..4423902 -
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