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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4446401..4447376- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006028-T1 ID=KJC3_006028-T1|Name=KJC3_006028-T1|organism=Aspergillus niger KJC3|type=mRNA|length=976bp|location=Sequence derived from alignment at ch4:4446401..4447376- (Aspergillus niger KJC3)
ATGCCTCCACGTCTTTCTATATATACTCCGTTACGATCCACTTTCTCCTA
CCGCGTCACGGTCGCCAGATTTAGCACGAGCAGCGACAATGCCGTCATCC
AGACCCAGCACGTTCCCGCCCCAGGGTCGGGGAACATTCGCGTCCTGCTT
TTGAACCGGCCCAAGGCACGCAACGCAATCTCTCGCGATCTCCTCGACGG
GCTTGCCAGGAATGTTAAATCTATTGCCGCTGAAGGAGGCTCAGGGCCAA
CGCGTGCTCTGGTCATCGGCAGCAACGTCGACTCGGCCTTCTGCGCGGGC
GCAGATCTCAAGGAACGTGCGGGCATGAGCCGGGAAGAGTACGCGGCCCT
CCAGTTCCCCAAACCCCATCACAAACTACTGACCGTTGCAATTGCCATGG
CTTAGAACAGCCGAATTCTTATACAATCTGCGAAGCACCTTCCGCAACCT
CTCGGAGCTCCCCATTCCCACCATCTCCGCCGTTTCCTCTATGGCGCTGG
GCGGCGGCCTTGAACTTGCTCTAAGCACACATCTTCGCGTCTTCGGCTCC
TCGTGTATGGTCGGACTTCCCGAGACAAGGTTGGCCATTATTCCTGGGGC
TGGAGGTACCTATCGCCTCCCCAGTCTGATTGGCGTGAACCGTGCACGGG
ACCTTATTCTCACTGGACGGCGCGTATCCGGCCCGGAGTCGTATTTCATC
GGCCTATGCGATCGGCTTGTGGAGGTGCTCCCGGAAGAGGAAGGAAAGGA
GGGTGTGGCGAGGGAGAAGGTCCTCACGGAAAGTATCAAGCTGGCGCTGG
AGATCTGTGAGGGCGGGCCAATTGCCATCAAGCAGGCCTTGAAGGCTGTG
AGTGAGTATCAACGGGGCGAGGAGGCTGAAAATGAGGCGTACGACGGCGT
GATGGGCACCGAAGATCGGTTTGAGGCTCTCAGGGCGTTCGCGGAAAAGC
GGAAGCCCGTCTTCAGGGGGCGATGA back to topCoding sequence (CDS) from alignment at ch4:4446401..4447376- >KJC3_006028-T1 ID=KJC3_006028-T1|Name=KJC3_006028-T1|organism=Aspergillus niger KJC3|type=CDS|length=1818bp|location=Sequence derived from alignment at ch4:4446401..4447376- (Aspergillus niger KJC3)
AACAGCCGAATTCTTATACAATCTGCGAAGCACCTTCCGCAACCTCTCGG
AGCTCCCCATTCCCACCATCTCCGCCGTTTCCTCTATGGCGCTGGGCGGC
GGCCTTGAACTTGCTCTAAGCACACATCTTCGCGTCTTCGGCTCCTCGTG
TATGGTCGGACTTCCCGAGACAAGGTTGGCCATTATTCCTGGGGCTGGAG
GTACCTATCGCCTCCCCAGTCTGATTGGCGTGAACCGTGCACGGGACCTT
ATTCTCACTGGACGGCGCGTATCCGGCCCGGAGTCGTATTTCATCGGCCT
ATGCGATCGGCTTGTGGAGGTGCTCCCGGAAGAGGAAGGAAAGGAGGGTG
TGGCGAGGGAGAAGGTCCTCACGGAAAGTATCAAGCTGGCGCTGGAGATC
TGTGAGGGCGGGCCAATTGCCATCAAGCAGGCCTTGAAGGCTGTGAGTGA
GTATCAACGGGGCGAGGAGGCTGAAAATGAGGCGTACGACGGCGTGATGG
GCACCGAAGATCGGTTTGAGGCTCTCAGGGCGTTCGCGGAAAAGCGGAAG
CCCGTCTTCAGGGGGCGATGAATGCCTCCACGTCTTTCTATATATACTCC
GTTACGATCCACTTTCTCCTACCGCGTCACGGTCGCCAGATTTAGCACGA
GCAGCGACAATGCCGTCATCCAGACCCAGCACGTTCCCGCCCCAGGGTCG
GGGAACATTCGCGTCCTGCTTTTGAACCGGCCCAAGGCACGCAACGCAAT
CTCTCGCGATCTCCTCGACGGGCTTGCCAGGAATGTTAAATCTATTGCCG
CTGAAGGAGGCTCAGGGCCAACGCGTGCTCTGGTCATCGGCAGCAACGTC
GACTCGGCCTTCTGCGCGGGCGCAGATCTCAAGGAACGTGCGGGCATGAG
CCGGGAAGAAACAGCCGAATTCTTATACAATCTGCGAAGCACCTTCCGCA
ACCTCTCGGAGCTCCCCATTCCCACCATCTCCGCCGTTTCCTCTATGGCG
CTGGGCGGCGGCCTTGAACTTGCTCTAAGCACACATCTTCGCGTCTTCGG
CTCCTCGTGTATGGTCGGACTTCCCGAGACAAGGTTGGCCATTATTCCTG
GGGCTGGAGGTACCTATCGCCTCCCCAGTCTGATTGGCGTGAACCGTGCA
CGGGACCTTATTCTCACTGGACGGCGCGTATCCGGCCCGGAGTCGTATTT
CATCGGCCTATGCGATCGGCTTGTGGAGGTGCTCCCGGAAGAGGAAGGAA
AGGAGGGTGTGGCGAGGGAGAAGGTCCTCACGGAAAGTATCAAGCTGGCG
CTGGAGATCTGTGAGGGCGGGCCAATTGCCATCAAGCAGGCCTTGAAGGC
TGTGAGTGAGTATCAACGGGGCGAGGAGGCTGAAAATGAGGCGTACGACG
GCGTGATGGGCACCGAAGATCGGTTTGAGGCTCTCAGGGCGTTCGCGGAA
AAGCGGAAGCCCGTCTTCAGGGGGCGATGAATGCCTCCACGTCTTTCTAT
ATATACTCCGTTACGATCCACTTTCTCCTACCGCGTCACGGTCGCCAGAT
TTAGCACGAGCAGCGACAATGCCGTCATCCAGACCCAGCACGTTCCCGCC
CCAGGGTCGGGGAACATTCGCGTCCTGCTTTTGAACCGGCCCAAGGCACG
CAACGCAATCTCTCGCGATCTCCTCGACGGGCTTGCCAGGAATGTTAAAT
CTATTGCCGCTGAAGGAGGCTCAGGGCCAACGCGTGCTCTGGTCATCGGC
AGCAACGTCGACTCGGCCTTCTGCGCGGGCGCAGATCTCAAGGAACGTGC
GGGCATGAGCCGGGAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR014748 |
| DBxref | InterPro:IPR001753 |
| DBxref | PFAM:PF16113 |
| DBxref | PFAM:PF00378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4446401..4447376 - |
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