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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4451435..4455198+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006030-T1 ID=KJC3_006030-T1|Name=KJC3_006030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3764bp|location=Sequence derived from alignment at ch4:4451435..4455198+ (Aspergillus niger KJC3)
TGGAGTCCGTCTTGCGTCCTTTCAGCTCTGCGCCCTGACTTGCCCTGAAC
CCGCTTGCTTTTGTGGCGTCAAGGAGCTTGTTACTCCGTGTCAATCTACT
GTCGTTGTGACATTGCCGTGTGCGTCGCGATCTAATCCTCCCTAGCTGCA
GCGTACCGCTTCTCGATCGAGCCTCGTAACTATTGGCGCATCCGCTTCGG
AGAACAAGGAACACTCAATCACCGACGACTATTTTCCGCCTCTCTCGAAT
CATATCCCTTCATTCCATTTGTCTCCCATTTATTTTTGGCCGATTGTGTG
TTCGCTGTCACACTCTGTCGCCTGTTGGACCTTCCTGAGCGGCTTCGCAA
AAAAAGGAATAATCGAGGCCATTTTGTACTCGCGTCAAAGAAGAGTTCGA
GAACGGCGCGACCCCAAGCCATGAGTGCAGACGAAGGCGGAGGGACGGCC
CCGATGCCGGTCACGAATGGCGACCAGTCGCAAAATACGCCCGAACCATC
TGTCCTGGCGACTCCAGGCAAGCGAAAGCGTGTCGCGAGTCACGACGAGA
AGGCCGTCCAAGACGCTAGCGCTTCTGCGGCGCAATCGCAAGAAAAGGCA
AAATTACAGGAAACGCTACGCAATTTGGTGGACATTTTGAGCAAGTGAGC
ACTCCGCGTCACCACTAAATCGTGAATACTTCCCACTAACCCATGTCAGG
AGCGATGCCGATTTGCATCTCCTATCCTGTCCTTTACCGTCGTCGCCGGC
AAAACCACGTTCGAAACGCGCAAAGGTGTCCGGTGATAAAGACGAGAGTT
CGAGCATTCAAGCACGGGTGGCGTCAGACCGATACAGTAGTTTGTCGGAG
TTTTTGAGCGATATTGAGAAGGCGTCGGCGGCGGTGATAGAGCGGAACAA
AGCTCAAGCAACGCCTGCTCCAGCTGACGGGTCACCTCTGACAGAGACCG
TCAACCGCATCGCGGCGTTCAAGAAACTCCTGAATAGCCTTGTTCGCCAG
GCACATGTGAGCCAGGCCAACATCAAGACTGAGGCGTCGGAAGAGGACGG
AGAAGCCCCGGCAAAATCTACTCCGACTACTGTTGAGACCCGAAATGACA
GCCTCGTGTTGACATTGTTTGGAAATCCCGCAAATCCGAAGCAGCTTTAC
TCAAGCTTGCAGAAAACCGTCAAGGTTCCACTGCCTTCGGATGACGCTAA
TGCAGATAAATTTGTGGAGGTGCAAGCGCCCTTGCGCGAAATCGGCTTGC
CTAACGGGATCTCCACCACCAAGGTGCAGCCATTTGAAGCAGAGACTACT
GTCAAAGAACATAAGAGAACTTTCGGCGAGGTGTTCGCGCCTCGTTCAAC
ACTGCCCCAATTAGAGGTGCCGCGCAAATCCAGAGCTTCTACTCGCACTG
CTACCAACGGCTGGATCGATCCTTTTGAAGCCATCACCGACTATAAGGCC
TTTCTCGGGGATCGGAACAATTACTGCCTTGCACCTCTCCCTTCGGGGCA
TTGGCTTCAGTATGGTGGGGTCACATCCTCTCCGTCTGTCTGGAGTCGTC
GGCAGAAACAGCATTCTTCTCAGCAACCGGGCGAGGAAGTTCCAACCGAT
GACCCTGCGCTGAGCATTGACGAGGATGCTGCCCTTTTGCAAGGGGTGTA
CTCGTCTTTTGCTCCTTCTTTTGACAGCTCTGGAGCTGTCGAGCAAGCCG
ATTCCAAAAATCTGGTGTGGTGGAGCAAACGTGGAGCAAGACGTCTGAAT
ACGCTCCTCTCATTACCGTACGTGGAAGATGAACAGAAAGATTCCACATC
GGTGCAGCCCGGAAGTATCGGCGATCTTGACGAGTCCACTCTGGAGGAGA
TGGTGAAAACGTTCAACCCCGACGATTTTGCGGACAACATCGGGCATACA
GATATATCTACGGAAAAGGACGATCAAGAGCGAGAAATGGACGACGTATT
GCGCGATGTCTCTGATCTGCTAGAGACCCTTAGCTCCTACCAAAAGATTC
GGAGTTTGGAGACTACGGCTTCTAGCGGTCAAGGAACCGAGCCTAAAGAA
ACGACGCCCGATGCCACAGGAGCAGACACTCCGTCGACGGCAGAGCAGAC
TGTGTATGAGACGCTCAAGTCAAGTCTAGCAGCTCTTGTCGCGACTCTGC
CACCTTACGCTGTTGCCAAGTTGGACGGTGACCAGCTGGCCGAGCTGAAC
ATCAGCCAAAAGATCCTGGTTGAGAATCCTGAGTACCAGGGCACAATGGA
AAAGGATGACTATGCTTTGCAGCAGGAGCGTGCAGCTGCCATGGCTGCCA
CCAGCGGCGCGAATAGGACTTCAACTCCTTCACGTTCCGGTAGCTTCCAG
GCGCAGTTCAACCAACGAGCATTTACGGCCAACGCGCGAACGCAGCCTCA
GACTTTCCAGACGCCACAGCCTTACTACGGGGCAAGGCAGAACTCCACGC
CAGCGCCATACACTCCTGGCCATCCTCAGCAATTCGCTGGAGCACGCCCT
CCGTCAACACCGCAGCAGAGACCAGGTTACTTCCCTGGTTACGCGCAGCA
GCCCACTCCGCAATACAACCAGTACCAACGTCCCGGCCAGAATGGCTACC
ACCCCTACCCGGGACAACAGGGCCCTCCCGCCGCGGGTCAGGGGTCTCCC
CAGCCCTACACCCCGCGTCCCGGACAGCCTGCGCCCTATAACGCGCCCTA
TGCAGCCGGACGCAGCGCATCCCCCCAGAAACCTCCTTCATACGCTACTC
CCCGGGGCTCTTTCGCTGCTCCAGGCTCAGCCAACCCACAACAACGGTTC
GTGCCGCAACAACAACCAGGCCAGCAGCCCCCTCCTTATGGGAACTACCC
CTCGAACCAAGCCCCGCCGCCATCAGGAGGATATTCCAATTCAGCTGCGG
CCATGACCTATGCTCGGAGCGCTGCCGAACAAGCCATTATGATGGAGAGG
AACAAAGTTCAATTAGCAGCAGCAGCCCAAAACCGGCCCAGCTCAGCGAC
ACCACAGCCATCGGGCGAAGTCTCCCAAGATCGAAGTGCAACGCCCGGAA
GCAAGCAGAACGGCACGCCTGCACCATGACGAGCGGGGCGATTGATGAGA
CACGGTCGAGATGTAGGGATATGAGTTTGATTAACACTTATTATTCGTCT
TTCTCACTCTTTCTTACCTTTTAACTTTTAACAACTTTTTCTCTTGTTAA
CACTATACCATTCCAATTATTTCACTTCTTCCTTCCCTTTCCACTGGTTT
TCTTACCACTCGCAGAGCTTAGAAAACAAATATTCCAGAAGAAAATAACC
CACAACCGGGAAGAAAACAAAAAACAATACAGTGATGAATTCCAATACCT
TGTATTGTGGTGGTCAATTCCATGTTGGATAACCTTTCCACTCAGCGACG
ATAACCCCTTACCTACCTACCTACCTACTCTACTTCTACCAATTATTCTA
ACTTCAATTTTCTTTTAATCCTTTTCCCCTCTGTCACAAGGCAATAATTT
CCGTTGCTTTCTAGATTCGGCTTTATTTTCAAGTTCAGGTTCCCTTTTAT
TTTACCCCAAACAGGACAGGACAGGACGGATGTTTTTAAATCACTGGTAT
TCCACAGGCATGTATGGATGGATGGATGGATGTTCTGAGTTTTTTATCTC
GTTGGTTTGCGTTGCTTTGTCATACTTAACCTCTTTTATCCCTCCATTGT
TTCCATTGCCAATGGAGTTGACTTTTCTTTTCATCTGTTTACCAGAGTCC
CTAAATCAATGAAC back to topCoding sequence (CDS) from alignment at ch4:4451435..4455198+ >KJC3_006030-T1 ID=KJC3_006030-T1|Name=KJC3_006030-T1|organism=Aspergillus niger KJC3|type=CDS|length=5208bp|location=Sequence derived from alignment at ch4:4451435..4455198+ (Aspergillus niger KJC3)
ATGAGTGCAGACGAAGGCGGAGGGACGGCCCCGATGCCGGTCACGAATGG
CGACCAGTCGCAAAATACGCCCGAACCATCTGTCCTGGCGACTCCAGGCA
AGCGAAAGCGTGTCGCGAGTCACGACGAGAAGGCCGTCCAAGACGCTAGC
GCTTCTGCGGCGCAATCGCAAGAAAAGGCAAAATTACAGGAAACGCTACG
CAATTTGGTGGACATTTTGAGCAAGAGCGATGCCGATTTGCATCTCCTAT
CCTGTCCTTTACCGTCGTCGCCGGCAAAACCACGTTCGAAACGCGCAAAG
GTGTCCGGTGATAAAGACGAGAGTTCGAGCATTCAAGCACGGGTGGCGTC
AGACCGATACAGTAGTTTGTCGGAGTTTTTGAGCGATATTGAGAAGGCGT
CGGCGGCGGTGATAGAGCGGAACAAAGCTCAAGCAACGCCTGCTCCAGCT
GACGGGTCACCTCTGACAGAGACCGTCAACCGCATCGCGGCGTTCAAGAA
ACTCCTGAATAGCCTTGTTCGCCAGGCACATGTGAGCCAGGCCAACATCA
AGACTGAGGCGTCGGAAGAGGACGGAGAAGCCCCGGCAAAATCTACTCCG
ACTACTGTTGAGACCCGAAATGACAGCCTCGTGTTGACATTGTTTGGAAA
TCCCGCAAATCCGAAGCAGCTTTACTCAAGCTTGCAGAAAACCGTCAAGG
TTCCACTGCCTTCGGATGACGCTAATGCAGATAAATTTGTGGAGGTGCAA
GCGCCCTTGCGCGAAATCGGCTTGCCTAACGGGATCTCCACCACCAAGGT
GCAGCCATTTGAAGCAGAGACTACTGTCAAAGAACATAAGAGAACTTTCG
GCGAGGTGTTCGCGCCTCGTTCAACACTGCCCCAATTAGAGGTGCCGCGC
AAATCCAGAGCTTCTACTCGCACTGCTACCAACGGCTGGATCGATCCTTT
TGAAGCCATCACCGACTATAAGGCCTTTCTCGGGGATCGGAACAATTACT
GCCTTGCACCTCTCCCTTCGGGGCATTGGCTTCAGTATGGTGGGGTCACA
TCCTCTCCGTCTGTCTGGAGTCGTCGGCAGAAACAGCATTCTTCTCAGCA
ACCGGGCGAGGAAGTTCCAACCGATGACCCTGCGCTGAGCATTGACGAGG
ATGCTGCCCTTTTGCAAGGGGTGTACTCGTCTTTTGCTCCTTCTTTTGAC
AGCTCTGGAGCTGTCGAGCAAGCCGATTCCAAAAATCTGGTGTGGTGGAG
CAAACGTGGAGCAAGACGTCTGAATACGCTCCTCTCATTACCGTACGTGG
AAGATGAACAGAAAGATTCCACATCGGTGCAGCCCGGAAGTATCGGCGAT
CTTGACGAGTCCACTCTGGAGGAGATGGTGAAAACGTTCAACCCCGACGA
TTTTGCGGACAACATCGGGCATACAGATATATCTACGGAAAAGGACGATC
AAGAGCGAGAAATGGACGACGTATTGCGCGATGTCTCTGATCTGCTAGAG
ACCCTTAGCTCCTACCAAAAGATTCGGAGTTTGGAGACTACGGCTTCTAG
CGGTCAAGGAACCGAGCCTAAAGAAACGACGCCCGATGCCACAGGAGCAG
ACACTCCGTCGACGGCAGAGCAGACTGTGTATGAGACGCTCAAGTCAAGT
CTAGCAGCTCTTGTCGCGACTCTGCCACCTTACGCTGTTGCCAAGTTGGA
CGGTGACCAGCTGGCCGAGCTGAACATCAGCCAAAAGATCCTGGTTGAGA
ATCCTGAGTACCAGGGCACAATGGAAAAGGATGACTATGCTTTGCAGCAG
GAGCGTGCAGCTGCCATGGCTGCCACCAGCGGCGCGAATAGGACTTCAAC
TCCTTCACGTTCCGGTAGCTTCCAGGCGCAGTTCAACCAACGAGCATTTA
CGGCCAACGCGCGAACGCAGCCTCAGACTTTCCAGACGCCACAGCCTTAC
TACGGGGCAAGGCAGAACTCCACGCCAGCGCCATACACTCCTGGCCATCC
TCAGCAATTCGCTGGAGCACGCCCTCCGTCAACACCGCAGCAGAGACCAG
GTTACTTCCCTGGTTACGCGCAGCAGCCCACTCCGCAATACAACCAGTAC
CAACGTCCCGGCCAGAATGGCTACCACCCCTACCCGGGACAACAGGGCCC
TCCCGCCGCGGGTCAGGGGTCTCCCCAGCCCTACACCCCGCGTCCCGGAC
AGCCTGCGCCCTATAACGCGCCCTATGCAGCCGGACGCAGCGCATCCCCC
CAGAAACCTCCTTCATACGCTACTCCCCGGGGCTCTTTCGCTGCTCCAGG
CTCAGCCAACCCACAACAACGGTTCGTGCCGCAACAACAACCAGGCCAGC
AGCCCCCTCCTTATGGGAACTACCCCTCGAACCAAGCCCCGCCGCCATCA
GGAGGATATTCCAATTCAGCTGCGGCCATGACCTATGCTCGGAGCGCTGC
CGAACAAGCCATTATGATGGAGAGGAACAAAGTTCAATTAGCAGCAGCAG
CCCAAAACCGGCCCAGCTCAGCGACACCACAGCCATCGGGCGAAGTCTCC
CAAGATCGAAGTGCAACGCCCGGAAGCAAGCAGAACGGCACGCCTGCACC
ATGAATGAGTGCAGACGAAGGCGGAGGGACGGCCCCGATGCCGGTCACGA
ATGGCGACCAGTCGCAAAATACGCCCGAACCATCTGTCCTGGCGACTCCA
GGCAAGCGAAAGCGTGTCGCGAGTCACGACGAGAAGGCCGTCCAAGACGC
TAGCGCTTCTGCGGCGCAATCGCAAGAAAAGGCAAAATTACAGGAAACGC
TACGCAATTTGGTGGACATTTTGAGCAAGAGCGATGCCGATTTGCATCTC
CTATCCTGTCCTTTACCGTCGTCGCCGGCAAAACCACGTTCGAAACGCGC
AAAGGTGTCCGGTGATAAAGACGAGAGTTCGAGCATTCAAGCACGGGTGG
CGTCAGACCGATACAGTAGTTTGTCGGAGTTTTTGAGCGATATTGAGAAG
GCGTCGGCGGCGGTGATAGAGCGGAACAAAGCTCAAGCAACGCCTGCTCC
AGCTGACGGGTCACCTCTGACAGAGACCGTCAACCGCATCGCGGCGTTCA
AGAAACTCCTGAATAGCCTTGTTCGCCAGGCACATGTGAGCCAGGCCAAC
ATCAAGACTGAGGCGTCGGAAGAGGACGGAGAAGCCCCGGCAAAATCTAC
TCCGACTACTGTTGAGACCCGAAATGACAGCCTCGTGTTGACATTGTTTG
GAAATCCCGCAAATCCGAAGCAGCTTTACTCAAGCTTGCAGAAAACCGTC
AAGGTTCCACTGCCTTCGGATGACGCTAATGCAGATAAATTTGTGGAGGT
GCAAGCGCCCTTGCGCGAAATCGGCTTGCCTAACGGGATCTCCACCACCA
AGGTGCAGCCATTTGAAGCAGAGACTACTGTCAAAGAACATAAGAGAACT
TTCGGCGAGGTGTTCGCGCCTCGTTCAACACTGCCCCAATTAGAGGTGCC
GCGCAAATCCAGAGCTTCTACTCGCACTGCTACCAACGGCTGGATCGATC
CTTTTGAAGCCATCACCGACTATAAGGCCTTTCTCGGGGATCGGAACAAT
TACTGCCTTGCACCTCTCCCTTCGGGGCATTGGCTTCAGTATGGTGGGGT
CACATCCTCTCCGTCTGTCTGGAGTCGTCGGCAGAAACAGCATTCTTCTC
AGCAACCGGGCGAGGAAGTTCCAACCGATGACCCTGCGCTGAGCATTGAC
GAGGATGCTGCCCTTTTGCAAGGGGTGTACTCGTCTTTTGCTCCTTCTTT
TGACAGCTCTGGAGCTGTCGAGCAAGCCGATTCCAAAAATCTGGTGTGGT
GGAGCAAACGTGGAGCAAGACGTCTGAATACGCTCCTCTCATTACCGTAC
GTGGAAGATGAACAGAAAGATTCCACATCGGTGCAGCCCGGAAGTATCGG
CGATCTTGACGAGTCCACTCTGGAGGAGATGGTGAAAACGTTCAACCCCG
ACGATTTTGCGGACAACATCGGGCATACAGATATATCTACGGAAAAGGAC
GATCAAGAGCGAGAAATGGACGACGTATTGCGCGATGTCTCTGATCTGCT
AGAGACCCTTAGCTCCTACCAAAAGATTCGGAGTTTGGAGACTACGGCTT
CTAGCGGTCAAGGAACCGAGCCTAAAGAAACGACGCCCGATGCCACAGGA
GCAGACACTCCGTCGACGGCAGAGCAGACTGTGTATGAGACGCTCAAGTC
AAGTCTAGCAGCTCTTGTCGCGACTCTGCCACCTTACGCTGTTGCCAAGT
TGGACGGTGACCAGCTGGCCGAGCTGAACATCAGCCAAAAGATCCTGGTT
GAGAATCCTGAGTACCAGGGCACAATGGAAAAGGATGACTATGCTTTGCA
GCAGGAGCGTGCAGCTGCCATGGCTGCCACCAGCGGCGCGAATAGGACTT
CAACTCCTTCACGTTCCGGTAGCTTCCAGGCGCAGTTCAACCAACGAGCA
TTTACGGCCAACGCGCGAACGCAGCCTCAGACTTTCCAGACGCCACAGCC
TTACTACGGGGCAAGGCAGAACTCCACGCCAGCGCCATACACTCCTGGCC
ATCCTCAGCAATTCGCTGGAGCACGCCCTCCGTCAACACCGCAGCAGAGA
CCAGGTTACTTCCCTGGTTACGCGCAGCAGCCCACTCCGCAATACAACCA
GTACCAACGTCCCGGCCAGAATGGCTACCACCCCTACCCGGGACAACAGG
GCCCTCCCGCCGCGGGTCAGGGGTCTCCCCAGCCCTACACCCCGCGTCCC
GGACAGCCTGCGCCCTATAACGCGCCCTATGCAGCCGGACGCAGCGCATC
CCCCCAGAAACCTCCTTCATACGCTACTCCCCGGGGCTCTTTCGCTGCTC
CAGGCTCAGCCAACCCACAACAACGGTTCGTGCCGCAACAACAACCAGGC
CAGCAGCCCCCTCCTTATGGGAACTACCCCTCGAACCAAGCCCCGCCGCC
ATCAGGAGGATATTCCAATTCAGCTGCGGCCATGACCTATGCTCGGAGCG
CTGCCGAACAAGCCATTATGATGGAGAGGAACAAAGTTCAATTAGCAGCA
GCAGCCCAAAACCGGCCCAGCTCAGCGACACCACAGCCATCGGGCGAAGT
CTCCCAAGATCGAAGTGCAACGCCCGGAAGCAAGCAGAACGGCACGCCTG
CACCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006030-T1.utr5p1 | KJC3_006030-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006030-T1.utr3p1 | KJC3_006030-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4451435..4455198 + |
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