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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4470050..4472062- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006037-T1 ID=KJC3_006037-T1|Name=KJC3_006037-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2013bp|location=Sequence derived from alignment at ch4:4470050..4472062- (Aspergillus niger KJC3) AATACACTTATTAGCCATCGACGAAATTAAATGAGTTGTTCGTGCCAATT
TGTTAGCTATCGATCATGACTGAGCGAAAGGCTTTGTCCTGCGCCACTGT
ATCAGCTGGGCCGCCGAGCTACCAAGTCACATGACCACTGCCCGTGAGCT
TCGTGAGCCGGGCTGTCTGGCATCGACGCAATAGATCCAACAAGCCAAAT
CCTTCCCAACTTGCCCACCACTGATCGAACCATTATTCTCTGGGGCATAT
TCTTTCTATAACTTACAGTTAGCTGCGCTTGCTCTTTTCACACCCGCTCC
GCCTCTACCAGATTTCCGTCATGGGAGACGTCGCCGTCGAGACCCCGGCG
AACAACGTCACGCCTCTCACCAAGGCAGCTCCATTGGACACGATCCCCAA
CATAGACTCGCTCGAGGGCACAGGAAACGATGGGAGCGATGAATACGCCA
CACTGAAGAGATTGCAGAGACACCTAGAGTATGTTCTAACGGTGATGATG
TTGCCGCGGCACATGCTGACTCTTCAATAACAGGTACATTCAGCTTCAGG
AGGAGTACATCAAGGATGAGCAAAGGCAAGCTATATACCATCTTCCTCCG
AGCTTTTCATGCCCGAGCTAACATCTGCTACCCGTACAGGAGCTTGAAGA
GAGAACTTGTTCGTGCGCAGGAAGAGATCAAGCGGATACAGAGTGTGCCT
TTGGTTATCGGCCAGTTCATGGAGGCGATCGATCAGAAGTATGGTGCCGC
GCAGAGCTTTCGACATGGAACCAATAACTAATTATTGCAGTACCGGTATT
GTGCAGTCGTCGACCGGTTCGAATTATGTCGTCCGTATCCTGTCCACGCT
CGACCGCGAGAAGCTCAAGCCTTCGTCCTCGGTCGCACTCCACCGTCACT
CCAACGCCCTTGTCGATATCTTACCTCCGGAGGCTGACTCCTCCATCGCT
ATGCTGGGCGAGAATGAGAAGCCTGATGTGACCTATGCGGATGTTGGTGG
TCTTGACATGCAGAAGCAGGAGATCAGGGAAGCAGTCGAGCTGCCCTTGA
CGCAATTTGACCTTTACAAGCAGATCGGTGAGCTTAGTCTCCTCTTATTG
CTGTTCTCATTGGTAAGAGCAGAGTATTGATGCTGGAAATAGGTATCGAC
CCTCCTCGCGGCGTTCTCCTTTACGGCCCTCCCGGTACGGGTAAGACCAT
GCTGGTCAAGGCGGTGGCAAACAGCACAACCGCCAGCTTTATCCGTGTAA
ACGGCTCGGAATTCGTTCAGAAATACCTGGGTGAAGGACCTCGCATGGTT
CGTGATGTTTTCAGAATGGCGCGGGAGAACTCCCCGGCCATCATTTTCAT
CGATGAGATTGATGCCATCGCCACGAAGCGTTTCGACGCCCAGACCGGTG
CAGACCGTGAGGTGCAGCGTATTCTGCTGGAGCTTCTCAACCAGATGGAT
GGATTCGAGCAGTCGAGCAATGTCAAGGTTATCATGGCCACCAACAGAGC
CGATACTCTGGATCCGGCCTTGCTACGTCCGGGTCGTCTGGACCGGAAGA
TCGAGTTTCCGTCTTTGCGCGACCGGCGTGAGCGCCGGTTGATTTTCTCT
ACGATAGCATCCAAGATGTCGCTTTCGCCGGAAGTTGACCTGGACTCGCT
GATTGTGCGCAATGAGCCCCTCTCGGGTGCGGTCATTGCCGCGATCATGC
AAGAGGCGGGTCTCCGTGCTGTCCGGAAGAACCGTTACAACATCATCCAG
TCTGATCTCGAGGATGCTTACGCCGCCCAGGTGAAGACCGGACAGGAAGC
GGATAGGTACGGGACATTTTCTAATCTACCCGCGATCGGGACATGGCTAA
CCAAGCATATAGACTCGAATTCTACCGGTAAATCAAGTATGGGACGTGCA
TCAGGCTGGATATCGGATTACGCAAGGCGAACAGGGGGACCGTTAGCTGT
ATTATCAACATCTAGGCTATTTCATATTAGGACAACGACTGACGCATTGG
GTATTCCGCTGGG back to topCoding sequence (CDS) from alignment at ch4:4470050..4472062- >KJC3_006037-T1 ID=KJC3_006037-T1|Name=KJC3_006037-T1|organism=Aspergillus niger KJC3|type=CDS|length=7614bp|location=Sequence derived from alignment at ch4:4470050..4472062- (Aspergillus niger KJC3) ACTCGAATTCTACCGGTAAGTATCGACCCTCCTCGCGGCGTTCTCCTTTA CGGCCCTCCCGGTACGGGTAAGACCATGCTGGTCAAGGCGGTGGCAAACA GCACAACCGCCAGCTTTATCCGTGTAAACGGCTCGGAATTCGTTCAGAAA TACCTGGGTGAAGGACCTCGCATGGTTCGTGATGTTTTCAGAATGGCGCG GGAGAACTCCCCGGCCATCATTTTCATCGATGAGATTGATGCCATCGCCA CGAAGCGTTTCGACGCCCAGACCGGTGCAGACCGTGAGGTGCAGCGTATT CTGCTGGAGCTTCTCAACCAGATGGATGGATTCGAGCAGTCGAGCAATGT CAAGGTTATCATGGCCACCAACAGAGCCGATACTCTGGATCCGGCCTTGC TACGTCCGGGTCGTCTGGACCGGAAGATCGAGTTTCCGTCTTTGCGCGAC CGGCGTGAGCGCCGGTTGATTTTCTCTACGATAGCATCCAAGATGTCGCT TTCGCCGGAAGTTGACCTGGACTCGCTGATTGTGCGCAATGAGCCCCTCT CGGGTGCGGTCATTGCCGCGATCATGCAAGAGGCGGGTCTCCGTGCTGTC CGGAAGAACCGTTACAACATCATCCAGTCTGATCTCGAGGATGCTTACGC CGCCCAGGTGAAGACCGGACAGGAAGCGGATAGTACCGGTATTGTGCAGT CGTCGACCGGTTCGAATTATGTCGTCCGTATCCTGTCCACGCTCGACCGC GAGAAGCTCAAGCCTTCGTCCTCGGTCGCACTCCACCGTCACTCCAACGC CCTTGTCGATATCTTACCTCCGGAGGCTGACTCCTCCATCGCTATGCTGG GCGAGAATGAGAAGCCTGATGTGACCTATGCGGATGTTGGTGGTCTTGAC ATGCAGAAGCAGGAGATCAGGGAAGCAGTCGAGCTGCCCTTGACGCAATT TGACCTTTACAAGCAGATCGGAGCTTGAAGAGAGAACTTGTTCGTGCGCA GGAAGAGATCAAGCGGATACAGAGTGTGCCTTTGGTTATCGGCCAGTTCA TGGAGGCGATCGATCAGAAGTACATTCAGCTTCAGGAGGAGTACATCAAG GATGAGCAAAGATGGGAGACGTCGCCGTCGAGACCCCGGCGAACAACGTC ACGCCTCTCACCAAGGCAGCTCCATTGGACACGATCCCCAACATAGACTC GCTCGAGGGCACAGGAAACGATGGGAGCGATGAATACGCCACACTGAAGA GATTGCAGAGACACCTAGAACTCGAATTCTACCGGTAAGTATCGACCCTC CTCGCGGCGTTCTCCTTTACGGCCCTCCCGGTACGGGTAAGACCATGCTG GTCAAGGCGGTGGCAAACAGCACAACCGCCAGCTTTATCCGTGTAAACGG CTCGGAATTCGTTCAGAAATACCTGGGTGAAGGACCTCGCATGGTTCGTG ATGTTTTCAGAATGGCGCGGGAGAACTCCCCGGCCATCATTTTCATCGAT GAGATTGATGCCATCGCCACGAAGCGTTTCGACGCCCAGACCGGTGCAGA CCGTGAGGTGCAGCGTATTCTGCTGGAGCTTCTCAACCAGATGGATGGAT TCGAGCAGTCGAGCAATGTCAAGGTTATCATGGCCACCAACAGAGCCGAT ACTCTGGATCCGGCCTTGCTACGTCCGGGTCGTCTGGACCGGAAGATCGA GTTTCCGTCTTTGCGCGACCGGCGTGAGCGCCGGTTGATTTTCTCTACGA TAGCATCCAAGATGTCGCTTTCGCCGGAAGTTGACCTGGACTCGCTGATT GTGCGCAATGAGCCCCTCTCGGGTGCGGTCATTGCCGCGATCATGCAAGA GGCGGGTCTCCGTGCTGTCCGGAAGAACCGTTACAACATCATCCAGTCTG ATCTCGAGGATGCTTACGCCGCCCAGGTGAAGACCGGACAGGAAGCGGAT AGTACCGGTATTGTGCAGTCGTCGACCGGTTCGAATTATGTCGTCCGTAT CCTGTCCACGCTCGACCGCGAGAAGCTCAAGCCTTCGTCCTCGGTCGCAC TCCACCGTCACTCCAACGCCCTTGTCGATATCTTACCTCCGGAGGCTGAC TCCTCCATCGCTATGCTGGGCGAGAATGAGAAGCCTGATGTGACCTATGC GGATGTTGGTGGTCTTGACATGCAGAAGCAGGAGATCAGGGAAGCAGTCG AGCTGCCCTTGACGCAATTTGACCTTTACAAGCAGATCGGAGCTTGAAGA GAGAACTTGTTCGTGCGCAGGAAGAGATCAAGCGGATACAGAGTGTGCCT TTGGTTATCGGCCAGTTCATGGAGGCGATCGATCAGAAGTACATTCAGCT TCAGGAGGAGTACATCAAGGATGAGCAAAGATGGGAGACGTCGCCGTCGA GACCCCGGCGAACAACGTCACGCCTCTCACCAAGGCAGCTCCATTGGACA CGATCCCCAACATAGACTCGCTCGAGGGCACAGGAAACGATGGGAGCGAT GAATACGCCACACTGAAGAGATTGCAGAGACACCTAGAACTCGAATTCTA CCGGTAAGTATCGACCCTCCTCGCGGCGTTCTCCTTTACGGCCCTCCCGG TACGGGTAAGACCATGCTGGTCAAGGCGGTGGCAAACAGCACAACCGCCA GCTTTATCCGTGTAAACGGCTCGGAATTCGTTCAGAAATACCTGGGTGAA GGACCTCGCATGGTTCGTGATGTTTTCAGAATGGCGCGGGAGAACTCCCC GGCCATCATTTTCATCGATGAGATTGATGCCATCGCCACGAAGCGTTTCG ACGCCCAGACCGGTGCAGACCGTGAGGTGCAGCGTATTCTGCTGGAGCTT CTCAACCAGATGGATGGATTCGAGCAGTCGAGCAATGTCAAGGTTATCAT GGCCACCAACAGAGCCGATACTCTGGATCCGGCCTTGCTACGTCCGGGTC GTCTGGACCGGAAGATCGAGTTTCCGTCTTTGCGCGACCGGCGTGAGCGC CGGTTGATTTTCTCTACGATAGCATCCAAGATGTCGCTTTCGCCGGAAGT TGACCTGGACTCGCTGATTGTGCGCAATGAGCCCCTCTCGGGTGCGGTCA TTGCCGCGATCATGCAAGAGGCGGGTCTCCGTGCTGTCCGGAAGAACCGT TACAACATCATCCAGTCTGATCTCGAGGATGCTTACGCCGCCCAGGTGAA GACCGGACAGGAAGCGGATAGTACCGGTATTGTGCAGTCGTCGACCGGTT CGAATTATGTCGTCCGTATCCTGTCCACGCTCGACCGCGAGAAGCTCAAG CCTTCGTCCTCGGTCGCACTCCACCGTCACTCCAACGCCCTTGTCGATAT CTTACCTCCGGAGGCTGACTCCTCCATCGCTATGCTGGGCGAGAATGAGA AGCCTGATGTGACCTATGCGGATGTTGGTGGTCTTGACATGCAGAAGCAG GAGATCAGGGAAGCAGTCGAGCTGCCCTTGACGCAATTTGACCTTTACAA GCAGATCGGAGCTTGAAGAGAGAACTTGTTCGTGCGCAGGAAGAGATCAA GCGGATACAGAGTGTGCCTTTGGTTATCGGCCAGTTCATGGAGGCGATCG ATCAGAAGTACATTCAGCTTCAGGAGGAGTACATCAAGGATGAGCAAAGA TGGGAGACGTCGCCGTCGAGACCCCGGCGAACAACGTCACGCCTCTCACC AAGGCAGCTCCATTGGACACGATCCCCAACATAGACTCGCTCGAGGGCAC AGGAAACGATGGGAGCGATGAATACGCCACACTGAAGAGATTGCAGAGAC ACCTAGAACTCGAATTCTACCGGTAAGTATCGACCCTCCTCGCGGCGTTC TCCTTTACGGCCCTCCCGGTACGGGTAAGACCATGCTGGTCAAGGCGGTG GCAAACAGCACAACCGCCAGCTTTATCCGTGTAAACGGCTCGGAATTCGT TCAGAAATACCTGGGTGAAGGACCTCGCATGGTTCGTGATGTTTTCAGAA TGGCGCGGGAGAACTCCCCGGCCATCATTTTCATCGATGAGATTGATGCC ATCGCCACGAAGCGTTTCGACGCCCAGACCGGTGCAGACCGTGAGGTGCA GCGTATTCTGCTGGAGCTTCTCAACCAGATGGATGGATTCGAGCAGTCGA GCAATGTCAAGGTTATCATGGCCACCAACAGAGCCGATACTCTGGATCCG GCCTTGCTACGTCCGGGTCGTCTGGACCGGAAGATCGAGTTTCCGTCTTT GCGCGACCGGCGTGAGCGCCGGTTGATTTTCTCTACGATAGCATCCAAGA TGTCGCTTTCGCCGGAAGTTGACCTGGACTCGCTGATTGTGCGCAATGAG CCCCTCTCGGGTGCGGTCATTGCCGCGATCATGCAAGAGGCGGGTCTCCG TGCTGTCCGGAAGAACCGTTACAACATCATCCAGTCTGATCTCGAGGATG CTTACGCCGCCCAGGTGAAGACCGGACAGGAAGCGGATAGTACCGGTATT GTGCAGTCGTCGACCGGTTCGAATTATGTCGTCCGTATCCTGTCCACGCT CGACCGCGAGAAGCTCAAGCCTTCGTCCTCGGTCGCACTCCACCGTCACT CCAACGCCCTTGTCGATATCTTACCTCCGGAGGCTGACTCCTCCATCGCT ATGCTGGGCGAGAATGAGAAGCCTGATGTGACCTATGCGGATGTTGGTGG TCTTGACATGCAGAAGCAGGAGATCAGGGAAGCAGTCGAGCTGCCCTTGA CGCAATTTGACCTTTACAAGCAGATCGGAGCTTGAAGAGAGAACTTGTTC GTGCGCAGGAAGAGATCAAGCGGATACAGAGTGTGCCTTTGGTTATCGGC CAGTTCATGGAGGCGATCGATCAGAAGTACATTCAGCTTCAGGAGGAGTA CATCAAGGATGAGCAAAGATGGGAGACGTCGCCGTCGAGACCCCGGCGAA CAACGTCACGCCTCTCACCAAGGCAGCTCCATTGGACACGATCCCCAACA TAGACTCGCTCGAGGGCACAGGAAACGATGGGAGCGATGAATACGCCACA CTGAAGAGATTGCAGAGACACCTAGAACTCGAATTCTACCGGTAAGTATC GACCCTCCTCGCGGCGTTCTCCTTTACGGCCCTCCCGGTACGGGTAAGAC CATGCTGGTCAAGGCGGTGGCAAACAGCACAACCGCCAGCTTTATCCGTG TAAACGGCTCGGAATTCGTTCAGAAATACCTGGGTGAAGGACCTCGCATG GTTCGTGATGTTTTCAGAATGGCGCGGGAGAACTCCCCGGCCATCATTTT CATCGATGAGATTGATGCCATCGCCACGAAGCGTTTCGACGCCCAGACCG GTGCAGACCGTGAGGTGCAGCGTATTCTGCTGGAGCTTCTCAACCAGATG GATGGATTCGAGCAGTCGAGCAATGTCAAGGTTATCATGGCCACCAACAG AGCCGATACTCTGGATCCGGCCTTGCTACGTCCGGGTCGTCTGGACCGGA AGATCGAGTTTCCGTCTTTGCGCGACCGGCGTGAGCGCCGGTTGATTTTC TCTACGATAGCATCCAAGATGTCGCTTTCGCCGGAAGTTGACCTGGACTC GCTGATTGTGCGCAATGAGCCCCTCTCGGGTGCGGTCATTGCCGCGATCA TGCAAGAGGCGGGTCTCCGTGCTGTCCGGAAGAACCGTTACAACATCATC CAGTCTGATCTCGAGGATGCTTACGCCGCCCAGGTGAAGACCGGACAGGA AGCGGATAGTACCGGTATTGTGCAGTCGTCGACCGGTTCGAATTATGTCG TCCGTATCCTGTCCACGCTCGACCGCGAGAAGCTCAAGCCTTCGTCCTCG GTCGCACTCCACCGTCACTCCAACGCCCTTGTCGATATCTTACCTCCGGA GGCTGACTCCTCCATCGCTATGCTGGGCGAGAATGAGAAGCCTGATGTGA CCTATGCGGATGTTGGTGGTCTTGACATGCAGAAGCAGGAGATCAGGGAA GCAGTCGAGCTGCCCTTGACGCAATTTGACCTTTACAAGCAGATCGGAGC TTGAAGAGAGAACTTGTTCGTGCGCAGGAAGAGATCAAGCGGATACAGAG TGTGCCTTTGGTTATCGGCCAGTTCATGGAGGCGATCGATCAGAAGTACA TTCAGCTTCAGGAGGAGTACATCAAGGATGAGCAAAGATGGGAGACGTCG CCGTCGAGACCCCGGCGAACAACGTCACGCCTCTCACCAAGGCAGCTCCA TTGGACACGATCCCCAACATAGACTCGCTCGAGGGCACAGGAAACGATGG GAGCGATGAATACGCCACACTGAAGAGATTGCAGAGACACCTAGAACTCG AATTCTACCGGTAAGTATCGACCCTCCTCGCGGCGTTCTCCTTTACGGCC CTCCCGGTACGGGTAAGACCATGCTGGTCAAGGCGGTGGCAAACAGCACA ACCGCCAGCTTTATCCGTGTAAACGGCTCGGAATTCGTTCAGAAATACCT GGGTGAAGGACCTCGCATGGTTCGTGATGTTTTCAGAATGGCGCGGGAGA ACTCCCCGGCCATCATTTTCATCGATGAGATTGATGCCATCGCCACGAAG CGTTTCGACGCCCAGACCGGTGCAGACCGTGAGGTGCAGCGTATTCTGCT GGAGCTTCTCAACCAGATGGATGGATTCGAGCAGTCGAGCAATGTCAAGG TTATCATGGCCACCAACAGAGCCGATACTCTGGATCCGGCCTTGCTACGT CCGGGTCGTCTGGACCGGAAGATCGAGTTTCCGTCTTTGCGCGACCGGCG TGAGCGCCGGTTGATTTTCTCTACGATAGCATCCAAGATGTCGCTTTCGC CGGAAGTTGACCTGGACTCGCTGATTGTGCGCAATGAGCCCCTCTCGGGT GCGGTCATTGCCGCGATCATGCAAGAGGCGGGTCTCCGTGCTGTCCGGAA GAACCGTTACAACATCATCCAGTCTGATCTCGAGGATGCTTACGCCGCCC AGGTGAAGACCGGACAGGAAGCGGATAGTACCGGTATTGTGCAGTCGTCG ACCGGTTCGAATTATGTCGTCCGTATCCTGTCCACGCTCGACCGCGAGAA GCTCAAGCCTTCGTCCTCGGTCGCACTCCACCGTCACTCCAACGCCCTTG TCGATATCTTACCTCCGGAGGCTGACTCCTCCATCGCTATGCTGGGCGAG AATGAGAAGCCTGATGTGACCTATGCGGATGTTGGTGGTCTTGACATGCA GAAGCAGGAGATCAGGGAAGCAGTCGAGCTGCCCTTGACGCAATTTGACC TTTACAAGCAGATCGGAGCTTGAAGAGAGAACTTGTTCGTGCGCAGGAAG AGATCAAGCGGATACAGAGTGTGCCTTTGGTTATCGGCCAGTTCATGGAG GCGATCGATCAGAAGTACATTCAGCTTCAGGAGGAGTACATCAAGGATGA GCAAAGATGGGAGACGTCGCCGTCGAGACCCCGGCGAACAACGTCACGCC TCTCACCAAGGCAGCTCCATTGGACACGATCCCCAACATAGACTCGCTCG AGGGCACAGGAAACGATGGGAGCGATGAATACGCCACACTGAAGAGATTG CAGAGACACCTAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005524 | ATP binding |
| GO:0016787 | hydrolase activity |
Vocabulary: Biological Process
| Term | Definition |
| GO:0030163 | protein catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_006037-T1.utr3p1 | KJC3_006037-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_006037-T1.utr5p1 | KJC3_006037-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003960 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR005937 |
| DBxref | InterPro:IPR032501 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF16450 |
| DBxref | PFAM:PF07728 |
| DBxref | PFAM:PF07724 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch4 | supercontig | ch4:4470050..4472062 - |
|