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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4476782..4481011+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006040-T1 ID=KJC3_006040-T1|Name=KJC3_006040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4230bp|location=Sequence derived from alignment at ch4:4476782..4481011+ (Aspergillus niger KJC3)
ATCCCACCCCCCGCTTGTCTCCCAGTCATTGGATTTGCCTTCCACACGCC
TCACACAACTGTGGCCACGCACTAAGTGCTGGCCACCCTTTCACCCATTC
CTCGGCAGTACCGCGCACGTTGCTCAAAAGCCATCGCTGGTGGTCCTTTC
TTCCATGGGTTGCCGGCCTTTCTATGGCTGATCCATCATTCTGCTTTTGA
TCATTTTATTTTCTGCAGCTTGTTGTCATTCTAAAATCCACCTGAAACCT
CCACCCCCCATACTTCCCAAGATCGCCTTGCGATTTGCTGATCGGTCTTC
TGCCACTCAGTGCCGCTCGCAACGCCGCTGCTAATCCTCACTGGATTTTC
TGCCTTTTTGCGGTACCAGCGACGTTCCATGGTCCCGTGACCTGCTCGAT
CTCCTCGCAATCTCTCTCTCCGGCCTTCCAACCACTGCTATTCGGGACCG
GCCTCCATCCGCTTGTGAGTCGGCATTTTTAGTTGTCCAGCCTTGTCGGT
ATGTACATCCTGCCTGTCCCTTACAATTTTCCTTTTTAAGAAATCATCAA
TCCACCCACCCCAGATTATCCCATCCCCCCCCGTCTCTCCCCCAGCTACA
CGTTGGGGTGGCTGTCCTCGGTGTGGTGTGTGGTCGCTGCTTCGTGTCGC
AGAGCGACAGCGCGACACCCTTCACTGTCAGCTTCCTCACCTGACGCGTC
TAGACCCTCTTCCACCCTACAAACATGGGAGATTGTGTCATTTACCCCTA
AAAAATAAGCTCGTGATGACTGTAACACTGCTGTTCTTATCGGTCGCGTA
TCGATGATGATCTTGGTGCTCGTGTCATTTTTCTGACAGCTCTGGTTACC
TTACAGATGGGTTGGTAAAACCACTCGACATGAATGCCTGGCTAGCCGAC
GCCTCGAACCTTCCGAACCATGACAATGGTGCTTTTCACCAAGCGACCAT
TGATCCTTCTGCGGCATTCCTCCATACCTCTCCCACTCCCGACCCTACCC
AGTTCCAGCGCATGTTCAATGGCGTGCCGCGAAATGCCTCCCCTGGCTTC
CACAACCCGAACCAGGTGATTCCGTCCAAAAGGCCGCGACCAGAGGATGC
CATGTCGATGTCGCCTCGACAGGCTCCCGGGGCTATCGCGGCATCCCGGT
CCCAGACTCCTCACCAAGTGCCTTTTTCAGGGTACCAAGGAGCTGCGAAT
GGCGCGCCTCAATATCCTCCGCATCCGACTCCGTATCAGCACCTCCAGCA
AGGAGCCTCTCCGAACGTCACCCAATCTCCGATCATGCAGGAATTCGACC
AACACGGTGTACAACGAATGGGAACAGCTTCGCCTAGCCCGTTCTCCCCA
GCCGGCCCTCAAGTAGGCTCCCACATGTCTCCGTCACAGTCGGATCATCC
GAGTAGGGTGAACACGCCGCAAAATAGCTCATTCATGCCCAATCAACCTT
TCCCTCAGCCCATGGCACCCCAGTTCCCGCCCGCGCCTGCGATGACTACT
GCCGCTGTGCAGGCGCCGATGCAAGCACATTACGGTGGCATGCCTCAGGG
GTATCAGCAGGCCATAGCTGCCCAGCAGCAACAGCAGCGAATGCATGCCA
TGCAGATGCAAAATCAAGGTCGTCCAATGGCGATGAATCCCGCCATGGCC
GGGCGACCCGTGGCAGCTGGGATGAACGCGATGGCCAATCCTCAACAAAT
GGCCGCCATCAGGCAGATGCAACAGACCATGGCTAAACCGCCTAATCCGG
AAGGGTTTATGAGGTCACTGCAGAAATTCATGATGTCGCGCAACCTGCCG
CTCGATCCTAGTCCCGTTGTTTGCGGTCGCCCGATCAACCTGGTCCAGCT
TTATGCTACGGTCATGAAGCTCGGAGGATCGAAGAAGATAACAGCTGCGA
ATATGTGGCACGTCATTGCACAGCAACTTCAGTTCCCGCCGATGCAGCTG
CCGATGGCCATGCAGGAGCTTAGGGAGCATTATCAGCGGAACCTAGCTGC
GTACGAGCAGGCCTTCCTCAGCACCCAGCAGAAGCAATTTGCGGACCAAA
TGCAGCAAACAGCGGTGCCACGTCAACCCAGTGACCCATCTGCCATGCAG
TTCCAGTCTCCAGCCATCAAACCGGGCCAGGGTTTCGAAAATGCACAGCA
GATGGGACACCCATCGCCAAGCCCCGCGTCTGTATCAAGTAGCGTACAAC
ATAACGCTTCGAATGGTTTCGCGACGCCTACGCCTGTTAAAACCCAGGGC
AAGCCGCAGAATCAGCATCGTCTCAGTATTTCCCGCCAGTCACAGCCTCC
AGCAACGCCCAATGATCCTACTGGCCAAATGCCGAGTCAATCACCTGCGC
AGCCGGGCAAAGGCCCAGGTCAAGTCCCCGGCAAGCCCTCGGAGCAGCTG
GATCAGTCAGATCAGCCTTTGAAGCACCAGATTGAGGATCCCTATAAACC
CATGGTCTTGCCAGAAAGCAATTTCCATGGACCCATAGCCATCGATGAAA
TGTATCAGATTGGGGAGGATATTACTCGCTTGAAGCCTAATGTTCCCAGT
TTTGCTGAGCTGGGTGTAATTGATATCCACGCTCTCACAATGAGCATCAA
ATCCGGGATACATGCTGAAATGCGCATGGCCTTGGATACGCTTACATCCA
TATCCTCAGAGCCGGCGATCCAAATATCGTTAGATAACTGCGACGATCTG
GTGGAGAGCTTGATCGAATGCGCCGAGGACCAAGCAGAGTTTCTTGCGGA
ACATGCCGCAGAAGTGTCTGATATGATGCTTCTATCCTCATATGAAGAAG
TCACTCGTGGATGTCAATCGGAATGGACGTCTTTGGCGGATGTTCCAGAA
TTCGGCAGCCTCGACTACGAACTAGACCGTGCCGTCGACCGACTCATCTG
CATTACAACCATACTACGCAATTTCTCGTTTATCGAGTCAAACTTTGGAA
TGCTGTCTACGCCCCCGGTTGTTCAATTCATGTCGACTATCATTCGTTAC
CTCGGCACACGCAATATGCTTCTAAGGACACATCAGAACACATTGGATTT
CATGAAGGACACAGTAACATACCTCAGCAACGTGGCTCACACCATTCAGT
TACCGAGTAAAGAAGAAGCCCTCTGTCTTCTGCATTTCCTTCTTGCTTTT
GCACCATTCCCAGGACCTATGGGCTCGGAGGGTATTATGTTCAATTCATA
CAACCCCTCAGTTCACAAGTACACACCGGCAGCGGTTGATAGCTTGGCCA
AGCTTCTGGCACGGGACGAGCCCAACCGGACATTCTTCAGAGCAATCTTC
TCTGGCGATGGCGTTTCCATCCAGCAAGAGTTGCTGACTCGTGCCTTTGG
TCTTGCCATTTGCCCGGTCCCTGATCAGCCGCGGAAACCCTTGGCTATAG
CGGATGCTCGGAAGGTTTTCCTCATGCAAGGCCTTTTGGCAGCGGATATC
CTTTCAGGTTTTGCGGATGGGCCTATTGCCAAGTCATGGCTGGAGTCGAT
CGACGGGTTTGCCATCCATCTCCTGCGACTCTCATGCCTCCTGAGCACGG
AACGCGTTCCTCCACCGAACACCAACTCACGCCAATCCCATGCCGCAAGA
GGCCAAGCGGAAGCGGAAGCTGCTGCTTACAGCTCCATAATCAATCGGGG
TTTGGCGATTCTGCGTCGATTGGCCGAGAAGTCGAAGCTTGCTGATTCCA
ACGCCACGTTACGGTTCCCCTCGGGGATCATCCCAAGGAAAGAAAGCTTG
CTTGGCGCACTGCTGATGCCTAGCATAGACCCTGGTGTTGTACGGCAATT
GATAACTTATGCACGACTAGCGGAATGAATGTGGTAACTTCTGGAACGGT
TAGGGTTTTTCTGAGATCATTTCTAGCGCGCTGGTTAACCCGAAGGTTTC
ATGTTTGGGCCACGCTTAGAACATGCCTTGTTGATGTTTGCTTCTGTCAT
GTCTTCTACTTCCAACCTTGAGTAAACAACTATCTACATCTCCGTTTTCT
CCCTTTCTGTTCTCTTTTCATTTACTCTTTCTCTTTTGACTCTCTTACTC
GATCTCGTGTGTTTGGCGCCGGTGGGAAGAACCTTTTTTCTTTTATCGAG
AGAGGCGTGACAATGTGTATCTCTGTGCTTTACCGCTGTACAATGTTCAA
TACCCTCGGGCGACAAAAAAAAAAATCATGCATGATGTCTAAATGGGTAA
CTCTACTTTATCATGGCTCATCGACTGAAC back to topCoding sequence (CDS) from alignment at ch4:4476782..4481011+ >KJC3_006040-T1 ID=KJC3_006040-T1|Name=KJC3_006040-T1|organism=Aspergillus niger KJC3|type=CDS|length=2949bp|location=Sequence derived from alignment at ch4:4476782..4481011+ (Aspergillus niger KJC3)
ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGG
TGCTTTTCACCAAGCGACCATTGATCCTTCTGCGGCATTCCTCCATACCT
CTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG
CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAA
AAGGCCGCGACCAGAGGATGCCATGTCGATGTCGCCTCGACAGGCTCCCG
GGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA
GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGAC
TCCGTATCAGCACCTCCAGCAAGGAGCCTCTCCGAACGTCACCCAATCTC
CGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT
TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTC
TCCGTCACAGTCGGATCATCCGAGTAGGGTGAACACGCCGCAAAATAGCT
CATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG
CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACA
TTACGGTGGCATGCCTCAGGGGTATCAGCAGGCCATAGCTGCCCAGCAGC
AACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG
GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGC
GATGGCCAATCCTCAACAAATGGCCGCCATCAGGCAGATGCAACAGACCA
TGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC
ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCG
CCCGATCAACCTGGTCCAGCTTTATGCTACGGTCATGAAGCTCGGAGGAT
CGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT
CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCA
TTATCAGCGGAACCTAGCTGCGTACGAGCAGGCCTTCCTCAGCACCCAGC
AGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC
AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCA
GGGTTTCGAAAATGCACAGCAGATGGGACACCCATCGCCAAGCCCCGCGT
CTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT
ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTAT
TTCCCGCCAGTCACAGCCTCCAGCAACGCCCAATGATCCTACTGGCCAAA
TGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC
GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCA
GATTGAGGATCCCTATAAACCCATGGTCTTGCCAGAAAGCAATTTCCATG
GACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC
TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCA
CGCTCTCACAATGAGCATCAAATCCGGGATACATGCTGAAATGCGCATGG
CCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG
TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGA
CCAAGCAGAGTTTCTTGCGGAACATGCCGCAGAAGTGTCTGATATGATGC
TTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG
TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCG
TGCCGTCGACCGACTCATCTGCATTACAACCATACTACGCAATTTCTCGT
TTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC
ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGAC
ACATCAGAACACATTGGATTTCATGAAGGACACAGTAACATACCTCAGCA
ACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT
CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGA
GGGTATTATGTTCAATTCATACAACCCCTCAGTTCACAAGTACACACCGG
CAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG
ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGA
GTTGCTGACTCGTGCCTTTGGTCTTGCCATTTGCCCGGTCCCTGATCAGC
CGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA
GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGC
CAAGTCATGGCTGGAGTCGATCGACGGGTTTGCCATCCATCTCCTGCGAC
TCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA
CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTA
CAGCTCCATAATCAATCGGGGTTTGGCGATTCTGCGTCGATTGGCCGAGA
AGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC
ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGA
CCCTGGTGTTGTACGGCAATTGATAACTTATGCACGACTAGCGGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006040-T1.utr3p1 | KJC3_006040-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036431 |
| DBxref | InterPro:IPR001606 |
| DBxref | PFAM:PF01388 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4476782..4481011 + |
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