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KJC3_006046-T1, KJC3_006046-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006046-T1
Unique NameKJC3_006046-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4494479..4497499+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006046-T1 ID=KJC3_006046-T1|Name=KJC3_006046-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3021bp|location=Sequence derived from alignment at ch4:4494479..4497499+ (Aspergillus niger KJC3)
TTCTGAACTGCCGTGTACTCGCTCAGTGACCTTTGGGTACAGGCGTTTGC
GCTGCAGTATAGCCAGCTCCCGAAGCATCAACAACTTGTCGCATTCTACT
AACTTCAATCAACCAGCTTTGCCTCCTTTTAACTTGCTTCCCTTTCCCGT
ACCCCTCCAGTTGTTTTCTTGTTCAGCGTCCGTCCCGTCCTTATTCTTCT
TCGTGTCCTCGCCACCTCCGTCCGCTCGCTTGGCTATTTTTTTCCTTACA
TCCCCGGGGTCACCTGTCGACCTCCCTCGCTCTGATATATCGACACCACC
AACAATTATCCCCCTCCTCCTTTCTTCGCTATTATGTCTGCGGCTGTTAC
TTCGACCGTTTCGACCAGTCTAACTAATCATACCGATACTCGTAATTCTA
CCCCAATGGATGCGAAAAAGGCGGGTCTAGACGAAGGTGAGTGTTGTGCA
TCTTTAAGAAAAAACTGTTTCGATCCTTCGTTTTGCGCGCGTGGAACTCT
GGTACCTCCCATGCCCCAAACTCCCGAATATCTGCTGTATCTTGCACTTC
CTTACTTCATCATCGACCCTTGACCTGTTCTGGCTTGGTTGTACGCCACT
GTTCCCCCAAATGTTCTGTTGACTACCCGCCGCCGTCGGGATGACCTCAC
AATTGGCGTCATCGATGGGGGGTCACTGTTATCAGATCCCCCTTCCTCTC
AGACTTCGGCCTGGACCGCCTCATTTGGCCAACCTCTTTCATTCTACCCC
TGTTTCAGATAACCTCACTGTCGCGTACTTCATCATCGTCATTGTTATTG
TCGTTGTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGAC
TCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGATCC
TCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTG
ATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCC
AATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACACC
CGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGC
CGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGC
TCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGCGA
TTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTC
TCCGCACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCT
AGCCCCAACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGGTGGTGCGAC
ACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAAGAAGA
ACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCG
ACGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCAGGTTCCGA
CCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGC
TGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAA
GCATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGATGC
TGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAG
AGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCT
GCCAAGGGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAGCACCGCAGC
AAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAAGAAGG
CCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGG
GATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACAGACAC
GAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAACA
GGTAAGAAGCGCTTTTTACCATTTGGTGCGTTCAAGTTATTGGCTTGGTG
CTAACGTTCTTTGTAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAG
CAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAA
TGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATC
TCAAGACTTTGTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCCCAA
GGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGATGCGCA
TCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCC
CTGCTCAGGGGCTACGACGGTAATGAGTCCCCATGCGAGGCCACGATAAT
ACATGATTGGTCGTGTTCCGTTATATGCGGTTGAAGAACGGCCGATATTC
TTTAAATTCTTTTTCTTGCTTCAGGAGTGCAGGCGTCAACGTGAGGATGT
GTGGCGCCTTGTCTGCCTGCTACCTCTTGCTCTTATTATTTGGCTACGCG
CCACCGGCATGGATAGGTGTTATGATGTATACGATTTCTAAAACGGACGG
CTGAATTTGAAGTGGATTGGGCATCACTTGATCACCAGAAGGTGCAAACT
TGGCGCAAAAGCTTGGCTGCTTTCAATTTCTTTTTATCACTTGTTCTCTC
TTTTTTTTTTCGCTTCGACCCTCAAGAGCCCTCGTCCTGTCTGGCATCGG
TACTTGCAGGCTAGGGTGGTGTATTGTGTACTCATTTATCTTTTGCTTTC
TCTTTTTACACTGCTATCCCCTTTGCTGTGAGGGCTTCTCTTCGTCTGTC
TGATACTTGCGGGCCACTGGGTGTTTGCCTTCTCTATCATTTTGTTGCTG
CGAAACACGGTACTGGGTGGCGTACTGGAGGCTTCTTGCTATCGTTTGCT
TTCATACTAGATGCCATTAAGCGTCTAGGGAATTTGCTGAGCTTGAATTC
CAACTGATTCTTCGATCAAAA
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Coding sequence (CDS) from alignment at ch4:4494479..4497499+

>KJC3_006046-T1 ID=KJC3_006046-T1|Name=KJC3_006046-T1|organism=Aspergillus niger KJC3|type=CDS|length=4689bp|location=Sequence derived from alignment at ch4:4494479..4497499+ (Aspergillus niger KJC3)
ATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATAC
CGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACG
AAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTA
GATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGC
GACTGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGG
AACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAA
ACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGC
CCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTC
TGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACG
AGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTC
TTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTG
CTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGGTGGT
GCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAA
GAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATC
CAGCGACGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCAGGT
TCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTT
CATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGA
ACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTT
GATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGG
CAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGC
CCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAGCACC
GCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAA
GAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATG
TTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACA
GACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAG
GAACAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTG
CCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTT
ACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTT
GTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCC
CTCTCATGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAAC
ATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGG
GCTACGACGGTAAATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTC
TAACTAATCATACCGATACTCGTAATTCTACCCCAATGGATGCGAAAAAG
GCGGGTCTAGACGAAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATAC
CAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAG
CCATAACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAAC
CCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGG
TTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCAC
TTACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGC
TGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGG
CCCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTA
CCCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGG
TCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAGCT
GCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTC
TTAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACT
TCCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAA
CCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGG
CTAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAG
TTCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAA
TGACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGA
ATGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGT
GAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGCAC
AAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTA
AGGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAG
CCTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAGAG
AAAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGA
ACTTTCTCGAGAGGAACAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAG
AAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGA
GAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCA
ATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCC
CAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGATGC
GCATCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTA
TCCCTGCTCAGGGGCTACGACGGTAAATGTCTGCGGCTGTTACTTCGACC
GTTTCGACCAGTCTAACTAATCATACCGATACTCGTAATTCTACCCCAAT
GGATGCGAAAAAGGCGGGTCTAGACGAAGACTCCCGGGCGACCTCTTCGG
ATCTTAAAGATACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCG
CCTCCGCGACCAGCCATAACAAGCGCGACTGATACCCCCGATTACTTCAA
CTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTT
TCGGCAGTGGTGGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCT
CCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGG
TGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTG
CTATGCTCGCCGGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGC
AGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCC
GGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCAC
TCCTGCAGCAGCTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTT
CACCGTACTGCTCTTAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAAC
CTCTAACCCCACTTCCGAACCTGATCCAGCGACGCAAAACTCCAATATGG
ATATTAAGCCGAACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGAC
GCTGCTGATGCGGCTAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGC
GAACCCCAATCAGTTCACTGTATCGAACCAAGCATCGATTCAGCCACAAA
GTATTCAGGCCAATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAAC
TCGCAAAACATGAATGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTC
TGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAA
AGAACACTGGCACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCA
GAAGATGCACCTAAGGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTC
TGGTAGTGTTGAGCCTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAG
ATGATATGAAGAGAAAGAACTCGACAGACACGAAGAAAATGACTGATGAA
GAGAAGAGAAAGAACTTTCTCGAGAGGAACAGGGTTGCGGCGCTCAAGTG
TCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAAT
TGTTCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGT
GAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAAGACTGCCC
AGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGG
CAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCAA
CCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006046KJC3_006046Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006046-T1KJC3_006046-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006046-T1.utr5p1KJC3_006046-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006046-T1.utr5p2KJC3_006046-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006046-T1.exon1KJC3_006046-T1.exon1Aspergillus niger KJC3exon
KJC3_006046-T1.exon2KJC3_006046-T1.exon2Aspergillus niger KJC3exon
KJC3_006046-T1.exon3KJC3_006046-T1.exon3Aspergillus niger KJC3exon
KJC3_006046-T1.exon4KJC3_006046-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006046-T1.cdsKJC3_006046-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006046-T1.utr3p1KJC3_006046-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021755
DBxrefInterPro:IPR021756
DBxrefInterPro:IPR020956
DBxrefInterPro:IPR004827
DBxrefInterPro:IPR002112
DBxrefPFAM:PF07716
DBxrefPFAM:PF00170
DBxrefPFAM:PF11785
DBxrefPFAM:PF11787
DBxrefPFAM:PF11786
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4494479..4497499 +
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