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KJC3_006048-T1, KJC3_006048-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006048-T1
Unique NameKJC3_006048-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4501550..4503250+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006048-T1 ID=KJC3_006048-T1|Name=KJC3_006048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1701bp|location=Sequence derived from alignment at ch4:4501550..4503250+ (Aspergillus niger KJC3)
GTCCACTTAAATTTTATCTCCGCACCTCACGTGGAAAATTTCCCCAAAAC
TTTCTGCGACCATCCAGAGACAACCCATACAACTATCTTTCTTGATCACC
ACTAAATCACTTTTTTCCCCGTTGTACTCCCACTGCTAATATATCTGGGA
CAACGCGACTCACATAAACTGCAAATTTGTTCATTTTCGTCCACCGCCGC
TCCGCAAATCGAACGACTCTTGCCATACCGTCGCATCGCTCAATGTCGAG
CAACCCCCAAGAATCTCCACAGCAGCAGCAACAACATATTCCGGCTTGGA
AGAAGATGGGTCTGAAACTCAAGTACGCTAAAGATACGGTGGAGGAGACG
GAGACGGATAAGGGAATTGTGGATAAGAAGCAGCAGGATCGCAACAAGAG
CAAGAAGAGACGGCTTGAGAATGATGATGAGGAAGATAAGGAAGTGAAGG
AGGACGATGCGGAGAAGAAGAAAAAGAAGAAGAAGAGGGTGTCGTTTTCG
GCGGATGCGAAGAAATTGGATGGTGATGCGGAGGATCAGGAGGAGCAGGA
GCAGGAGCAGGATCAAATGAAGATTGATGCTGACATTCCCGGGGATGATA
CTGGAGACAAGGCTGATGATGAAGGCGAGGGAAAGAAAAAGAAAAAGGAG
AAGAAGAAGAAGAACAAGAAGCAGGACGGTTCGAATGATGCTTCATCCAC
CACGACACCGAGAATCCACGAAACGCCTATCCTTTCCTACCTGAGTCTGT
ACCACAAGCATCGGTCGGCGTGGAAGTTCCAGAAGAACCGCGAGACGCAT
CTCTTCAAGCATGTATTGTCACTGGAGCAGGTCCCGACGCTGTACAATGC
GGCTTTGCTTGCCTATCTACAGGGTTTGAAGAGCGAAGGTGCGAAGTTGC
GGTTGCGACAGATTGCCGAGGAGGTCATCAAGGCGGAAGCCGATGCTGAG
GAAGATCAATCAAGTACTCCTGCGCAGACGGAAGAGTCGAAGGAGGGTAC
CTCTTCTGAAGCGAATGAGGACTCCGCGGCGACGGATAAGGCGAGTTACG
ACAAGGCTGTTGGTGTCTTCCGGACACGCTTGGCTGCGGGTCAAGATATC
GACTGCCAAGATGTTACTGGGCAGCTCAATGCTGAGACGCTGAAGAAGTA
CGAGAACAGGGCACGGGCTGAGCTCATTCTGTTTGCTGTTAACGGTACGC
TGTTCAATTACCACAAGCCGAAGCCTGCTGCGCAGAAAGGAAAGAAGGGG
GCGCAGAGCCAGCCCGGCAAGAAAAAGAAGAAGAACCGTACTGCTATCGT
TGAGATCTCGAGCAGCAGTGAGAGCGAGAGTTCGAGCGACAGTGATAGTG
ACAGCGACAGCGACGACGAGAAGAAGACCAAGGCCAAGCCTACAGCCGCT
AAAGCCTCGTCATCGAAAGATAGCAGTGACAGTGATAGTGACAGCAGCAG
CAGCAGCAGCAGCAGTGCTAGCGACAGCGATTCGGACAGCTCAATTTCGA
GTGACTAGCTGTGATGCCACTTTAGGAAGTCAGGTGCTTGTGCTTTCTTA
AATGAGCACACCCTTTCAATGACCTGCTGTTTGATCGTTATGTCCCAAAT
AAGGGAGATGTCCATTTTTATAGGAGCTTTTTATAGACCCCCATTTCCAG
TCATAGAGATCGCTATAGCTTGATCAATCACAACTCTGGCAGTTGCTTGG
C
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Coding sequence (CDS) from alignment at ch4:4501550..4503250+

>KJC3_006048-T1 ID=KJC3_006048-T1|Name=KJC3_006048-T1|organism=Aspergillus niger KJC3|type=CDS|length=1266bp|location=Sequence derived from alignment at ch4:4501550..4503250+ (Aspergillus niger KJC3)
ATGTCGAGCAACCCCCAAGAATCTCCACAGCAGCAGCAACAACATATTCC
GGCTTGGAAGAAGATGGGTCTGAAACTCAAGTACGCTAAAGATACGGTGG
AGGAGACGGAGACGGATAAGGGAATTGTGGATAAGAAGCAGCAGGATCGC
AACAAGAGCAAGAAGAGACGGCTTGAGAATGATGATGAGGAAGATAAGGA
AGTGAAGGAGGACGATGCGGAGAAGAAGAAAAAGAAGAAGAAGAGGGTGT
CGTTTTCGGCGGATGCGAAGAAATTGGATGGTGATGCGGAGGATCAGGAG
GAGCAGGAGCAGGAGCAGGATCAAATGAAGATTGATGCTGACATTCCCGG
GGATGATACTGGAGACAAGGCTGATGATGAAGGCGAGGGAAAGAAAAAGA
AAAAGGAGAAGAAGAAGAAGAACAAGAAGCAGGACGGTTCGAATGATGCT
TCATCCACCACGACACCGAGAATCCACGAAACGCCTATCCTTTCCTACCT
GAGTCTGTACCACAAGCATCGGTCGGCGTGGAAGTTCCAGAAGAACCGCG
AGACGCATCTCTTCAAGCATGTATTGTCACTGGAGCAGGTCCCGACGCTG
TACAATGCGGCTTTGCTTGCCTATCTACAGGGTTTGAAGAGCGAAGGTGC
GAAGTTGCGGTTGCGACAGATTGCCGAGGAGGTCATCAAGGCGGAAGCCG
ATGCTGAGGAAGATCAATCAAGTACTCCTGCGCAGACGGAAGAGTCGAAG
GAGGGTACCTCTTCTGAAGCGAATGAGGACTCCGCGGCGACGGATAAGGC
GAGTTACGACAAGGCTGTTGGTGTCTTCCGGACACGCTTGGCTGCGGGTC
AAGATATCGACTGCCAAGATGTTACTGGGCAGCTCAATGCTGAGACGCTG
AAGAAGTACGAGAACAGGGCACGGGCTGAGCTCATTCTGTTTGCTGTTAA
CGGTACGCTGTTCAATTACCACAAGCCGAAGCCTGCTGCGCAGAAAGGAA
AGAAGGGGGCGCAGAGCCAGCCCGGCAAGAAAAAGAAGAAGAACCGTACT
GCTATCGTTGAGATCTCGAGCAGCAGTGAGAGCGAGAGTTCGAGCGACAG
TGATAGTGACAGCGACAGCGACGACGAGAAGAAGACCAAGGCCAAGCCTA
CAGCCGCTAAAGCCTCGTCATCGAAAGATAGCAGTGACAGTGATAGTGAC
AGCAGCAGCAGCAGCAGCAGCAGTGCTAGCGACAGCGATTCGGACAGCTC
AATTTCGAGTGACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006048KJC3_006048Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006048-T1.utr5p1KJC3_006048-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006048-T1.exon1KJC3_006048-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006048-T1.cdsKJC3_006048-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006048-T1.utr3p1KJC3_006048-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006048-T1KJC3_006048-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092644DY
DBxrefInterPro:IPR019327
DBxrefPFAM:PF10180
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4501550..4503250 +
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