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KJC3_006054-T1, KJC3_006054-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006054-T1
Unique NameKJC3_006054-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4520429..4522150-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006054-T1 ID=KJC3_006054-T1|Name=KJC3_006054-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1722bp|location=Sequence derived from alignment at ch4:4520429..4522150- (Aspergillus niger KJC3)
GAACGTGCCTCGTTATGGCATCGGTTTCTCTTGGTAATATCCTACGGCTG
AAATTGGCGCTTGGCTGAGTTTCTTTCCCCTTGGCTTCCTATACAGCCCG
TGTGAGATCATGTTTGCAAGACCACGTCTCTGCACTCTTTCGTCACGGCC
TTCGGCTGTCAAGTTTCTCAGACAGCCCCGAAGCCAATATCTTCACGCTA
CCCCTCCATTGAGCTATCCCCGGCGGAAAGACTTCTTCTCTTCCAATGCA
TATCTATATCAGAAGCAAATGAAAAACGGCGACACGACCGATGAGACGGT
TCTAGAATCCCAGAAACAACGGAGAAGAAGCAATAGGTCGCCGGCCGCAT
CAACGTCACTCCGGAGAGTTGCAGTGGAGGCACAACGGTCGAAGGATGGA
ATGTTATCCAAAGCCCAGCTCAGGGAGCAGGGGCTCTATCAGCCCAAGGT
GCCAATGCCAAGAGCCGCGACCGTCCTTGAACCATTGCTAATCTATCAAT
GAGAAGACTGTAACAGCCTATGCCGTAGCTGAACAATTCAACATTCGCAA
AGTCAGAGACATCTTACAGGAGCGAGGCTACGAGCCGGACCCCTACGAGA
CGGGTCTGTATCCACAAGTTGTCCACATTGAGGTTCCTCTAGACTCAATC
CGCCGCCAGAGCAATCCGAATACCTTAGATCTGTCACCGAGCGAAGTGGG
GGATGTGTTTGTCTTTCCCTCGGGAACCGTGGTTGCATGGGCCCTACCTG
AAGGATTTACTTCCTTTTTGGCAACCAGGACATTATTACCTGCAGCTGAG
GGGGCACATCTTGATGACCTGGAAACAGAGGATCTTGAGTATGTTGAAGA
TTCTCAACGAGAGAATAGCAGCATCAAGGGCGACACCATCATCCTGGGGA
CCAAGCCAGGTAATGACGGGCCTAATTCCCACTTACCCACTCGGCAGTCT
GTAGATACGGTCCTTACAAAGGTGGCATTCTCGTCAGGGCTGGCTCGCAG
TACAAAATTGGCTGTATTGGAATCCCTCCTAGCCAATTACTTTGAATCTA
CTCGGCCTATTCCCACGCTCCTATCCAAGGGCTCACGTCTCCCATTCACT
CGGGACTTCATACTTCGCAAAACGGGCCAGCTGCTGAGTGTACGTGCGCA
GCTGAACTTATATTCGGAGCTCACGGACTCTCTGCCAGATATCTTCTGGG
ACAGTCGGCATGAACTGGGCTTAGAAGGGTACTATGAACAGGTAGGACGA
GCGCTCGATGTGGGGATCCGCATCAAGCTTCTGAACGAGAAGATGGATTA
TGCACAGGAGATCGCAAGTGTACTGCGGGAAAGGCTGAGCGAAACGCATG
GACTCCGACTCGAGTGGATTATCATCTTACTCATTGCTGTCGAGGTAGGA
TTTGAGGTCCTTCGGCTGTGGAAGGAGCGCGTCCACGAACAAGAGGCGAA
AAAGGAACAGGATACTGAGCGCTGATTCTCGACTGTAACCACCATCTCTA
CTCATGTACATACTCATATCATGGAGTTCTTCGAATATGATACCCAGGCG
TTGTTCTGTTCCGATATGCATGCACTACGTATTGAGTCACGATAAGGGAA
GCTTCAAGTCAATCCGGGGAGATCGACGATAAGGTGCTTATCGGACCAGT
CACATCACATGCCGCTGACTCAGGTACGGGGCCAAGTCATGGGATGGATG
CACGTGCTGCTGCTGTTGGGAC
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Coding sequence (CDS) from alignment at ch4:4520429..4522150-

>KJC3_006054-T1 ID=KJC3_006054-T1|Name=KJC3_006054-T1|organism=Aspergillus niger KJC3|type=CDS|length=2616bp|location=Sequence derived from alignment at ch4:4520429..4522150- (Aspergillus niger KJC3)
ACTGTAACAGCCTATGCCGTAGCTGAACAATTCAACATTCGCAAAGTCAG
AGACATCTTACAGGAGCGAGGCTACGAGCCGGACCCCTACGAGACGGGTC
TGTATCCACAAGTTGTCCACATTGAGGTTCCTCTAGACTCAATCCGCCGC
CAGAGCAATCCGAATACCTTAGATCTGTCACCGAGCGAAGTGGGGGATGT
GTTTGTCTTTCCCTCGGGAACCGTGGTTGCATGGGCCCTACCTGAAGGAT
TTACTTCCTTTTTGGCAACCAGGACATTATTACCTGCAGCTGAGGGGGCA
CATCTTGATGACCTGGAAACAGAGGATCTTGAGTATGTTGAAGATTCTCA
ACGAGAGAATAGCAGCATCAAGGGCGACACCATCATCCTGGGGACCAAGC
CAGGTAATGACGGGCCTAATTCCCACTTACCCACTCGGCAGTCTGTAGAT
ACGGTCCTTACAAAGGTGGCATTCTCGTCAGGGCTGGCTCGCAGTACAAA
ATTGGCTGTATTGGAATCCCTCCTAGCCAATTACTTTGAATCTACTCGGC
CTATTCCCACGCTCCTATCCAAGGGCTCACGTCTCCCATTCACTCGGGAC
TTCATACTTCGCAAAACGGGCCAGCTGCTGAGTGTACGTGCGCAGCTGAA
CTTATATTCGGAGCTCACGGACTCTCTGCCAGATATCTTCTGGGACAGTC
GGCATGAACTGGGCTTAGAAGGGTACTATGAACAGGTAGGACGAGCGCTC
GATGTGGGGATCCGCATCAAGCTTCTGAACGAGAAGATGGATTATGCACA
GGAGATCGCAAGTGTACTGCGGGAAAGGCTGAGCGAAACGCATGGACTCC
GACTCGAGTGGATTATCATCTTACTCATTGCTGTCGAGGTAGGATTTGAG
GTCCTTCGGCTGTGGAAGGAGCGCGTCCACGAACAAGAGGCGAAAAAGGA
ACAGGATACTGAGCGCTGAATGTTTGCAAGACCACGTCTCTGCACTCTTT
CGTCACGGCCTTCGGCTGTCAAGTTTCTCAGACAGCCCCGAAGCCAATAT
CTTCACGCTACCCCTCCATTGAGCTATCCCCGGCGGAAAGACTTCTTCTC
TTCCAATGCATATCTATATCAGAAGCAAATGAAAAACGGCGACACGACCG
ATGAGACGGTTCTAGAATCCCAGAAACAACGGAGAAGAAGCAATAGGTCG
CCGGCCGCATCAACGTCACTCCGGAGAGTTGCAGTGGAGGCACAACGGTC
GAAGGATGGAATGTTATCCAAAGCCCAGCTCAGGGAGCAGGGGCTCTATC
AGCCCAAGACTGTAACAGCCTATGCCGTAGCTGAACAATTCAACATTCGC
AAAGTCAGAGACATCTTACAGGAGCGAGGCTACGAGCCGGACCCCTACGA
GACGGGTCTGTATCCACAAGTTGTCCACATTGAGGTTCCTCTAGACTCAA
TCCGCCGCCAGAGCAATCCGAATACCTTAGATCTGTCACCGAGCGAAGTG
GGGGATGTGTTTGTCTTTCCCTCGGGAACCGTGGTTGCATGGGCCCTACC
TGAAGGATTTACTTCCTTTTTGGCAACCAGGACATTATTACCTGCAGCTG
AGGGGGCACATCTTGATGACCTGGAAACAGAGGATCTTGAGTATGTTGAA
GATTCTCAACGAGAGAATAGCAGCATCAAGGGCGACACCATCATCCTGGG
GACCAAGCCAGGTAATGACGGGCCTAATTCCCACTTACCCACTCGGCAGT
CTGTAGATACGGTCCTTACAAAGGTGGCATTCTCGTCAGGGCTGGCTCGC
AGTACAAAATTGGCTGTATTGGAATCCCTCCTAGCCAATTACTTTGAATC
TACTCGGCCTATTCCCACGCTCCTATCCAAGGGCTCACGTCTCCCATTCA
CTCGGGACTTCATACTTCGCAAAACGGGCCAGCTGCTGAGTGTACGTGCG
CAGCTGAACTTATATTCGGAGCTCACGGACTCTCTGCCAGATATCTTCTG
GGACAGTCGGCATGAACTGGGCTTAGAAGGGTACTATGAACAGGTAGGAC
GAGCGCTCGATGTGGGGATCCGCATCAAGCTTCTGAACGAGAAGATGGAT
TATGCACAGGAGATCGCAAGTGTACTGCGGGAAAGGCTGAGCGAAACGCA
TGGACTCCGACTCGAGTGGATTATCATCTTACTCATTGCTGTCGAGGTAG
GATTTGAGGTCCTTCGGCTGTGGAAGGAGCGCGTCCACGAACAAGAGGCG
AAAAAGGAACAGGATACTGAGCGCTGAATGTTTGCAAGACCACGTCTCTG
CACTCTTTCGTCACGGCCTTCGGCTGTCAAGTTTCTCAGACAGCCCCGAA
GCCAATATCTTCACGCTACCCCTCCATTGAGCTATCCCCGGCGGAAAGAC
TTCTTCTCTTCCAATGCATATCTATATCAGAAGCAAATGAAAAACGGCGA
CACGACCGATGAGACGGTTCTAGAATCCCAGAAACAACGGAGAAGAAGCA
ATAGGTCGCCGGCCGCATCAACGTCACTCCGGAGAGTTGCAGTGGAGGCA
CAACGGTCGAAGGATGGAATGTTATCCAAAGCCCAGCTCAGGGAGCAGGG
GCTCTATCAGCCCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006054KJC3_006054Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006054-T1KJC3_006054-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006054-T1.cdsKJC3_006054-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006054-T1.utr3p1KJC3_006054-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006054-T1.exon2KJC3_006054-T1.exon2Aspergillus niger KJC3exon
KJC3_006054-T1.exon1KJC3_006054-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006054-T1.utr5p1KJC3_006054-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003734
DBxrefPFAM:PF02582
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4520429..4522150 -
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