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KJC3_006061-T1, KJC3_006061-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006061-T1
Unique NameKJC3_006061-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4555425..4557929-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006061-T1 ID=KJC3_006061-T1|Name=KJC3_006061-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2505bp|location=Sequence derived from alignment at ch4:4555425..4557929- (Aspergillus niger KJC3)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATCCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Coding sequence (CDS) from alignment at ch4:4555425..4557929-

>KJC3_006061-T1 ID=KJC3_006061-T1|Name=KJC3_006061-T1|organism=Aspergillus niger KJC3|type=CDS|length=2505bp|location=Sequence derived from alignment at ch4:4555425..4557929- (Aspergillus niger KJC3)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATCCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003909DNA ligase activity
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003910DNA ligase (ATP) activity
Vocabulary: Biological Process
TermDefinition
GO:0051103DNA ligation involved in DNA repair
GO:0071897DNA biosynthetic process
GO:0006310DNA recombination
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006061KJC3_006061Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006061-T1.cdsKJC3_006061-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006061-T1.exon1KJC3_006061-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006061-T1KJC3_006061-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR016059
DBxrefInterPro:IPR012309
DBxrefInterPro:IPR000977
DBxrefInterPro:IPR036599
DBxrefInterPro:IPR012308
DBxrefInterPro:IPR012310
DBxrefPFAM:PF04675
DBxrefPFAM:PF01068
DBxrefPFAM:PF04679
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4555425..4557929 -
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