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KJC3_006067-T1, KJC3_006067-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006067-T1
Unique NameKJC3_006067-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4577852..4579485+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006067-T1 ID=KJC3_006067-T1|Name=KJC3_006067-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1634bp|location=Sequence derived from alignment at ch4:4577852..4579485+ (Aspergillus niger KJC3)
ATGTTGACCACAGACGTCTCACCATTGGCTTTTCCGCATCTGGTAATCAA
TGTCTAACGCGTGGCGGCACAGGGAGGTGGCCAATGGCAGAAACACCAAC
AAGGCAATAAGTCGGGCATTGAGGGAGGCGACTGGGGAGTCTTCGTGTCG
TGCGATCTGGGAAAGGAAGGGAAATGTATGGCAGAGGTAGTGGATGTTTT
CTCGCAGGTTAGTAGCATGAATGACAGGGCTTTGTGAATAGAAGGCGACC
CACGGTATCTGGCAGATTGATGCGATCTGATATGCTCATCCATCTGACTT
GTGTTATTTCCCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGC
AAGCTCGACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAAT
CAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGT
TTCATGCCATCAGAATGGATTTGCCATGTCGTGCGTTAACCCTCGTTCTC
CTCCTTAGATTGATCTAGGTTTTGAGAGACGCTAATATACTTCAGTGTTG
TTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCT
TTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCC
AACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTG
GAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACC
TCCCAAAAAGGTGAGTCTCGGTCTCACCGTAAGGCTTAGATGGTCATGAA
CTCCCATTAACCAGAAAATTTCAGTACGCAATTCGACCTGTGGTGAGAAG
CAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCG
TGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTC
GTCACCGTTATCCAGGTCAGTTTTCTACGGACGTAGTGTGGTGTTTAAGT
CGCTCATACAAGTACCGTAACTGACAATAAATTATCAGAATGTCATTGGC
ATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGC
CGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGG
ACTAACCTCGCATTCTCCCTGACTGACTTTTGGGCGACATTTGGCGTCGG
GAAAAATCTTGAAAAATGGCGGAATTGTGATCGCCTCATCAGCTCCATGA
CAGACAAAAGCTAGAAAAATGTATATACAGAGTTCGCGATATCCTAACCA
CCGACACGGCCTCTCTTAGTTCTAAATGATCCCCTCTATGAGCCACATGA
ACTTTAGAGCCGACGCATGATACGTGGCTACCAGCAAATTAGTTCAAAGT
GGTGTAATTTAGAGATAAGAGGCCATGGCAAAGGGAGGCATAATTTATTG
AATCCCCGCTCGAAGGACGGTCCGTCTGCCAATAGCTTGATTGGAGGGCG
AACAGAACAGGGATGTGCCGAAAGTTACCCAGGCAGCACAAAATACATTA
GGTAGCACAAGTCTCCTACCTTCCGCGATCACTGTGCGAAAGGGTAAATG
GGATAGCAGACCTACAATTTCATCGTAGTAGCAG
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Coding sequence (CDS) from alignment at ch4:4577852..4579485+

>KJC3_006067-T1 ID=KJC3_006067-T1|Name=KJC3_006067-T1|organism=Aspergillus niger KJC3|type=CDS|length=3345bp|location=Sequence derived from alignment at ch4:4577852..4579485+ (Aspergillus niger KJC3)
ATGGCAGAGGTAGTGGATGTTTTCTCGCAGAGTGTGGAATCATCCAGCAG
TGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATG
ACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCG
AGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCATGTCTGTT
GTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTACATCAGC
TTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATC
CAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCT
GGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGAC
CTCCCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTC
AACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACA
TCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACCGTTATCC
AGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAG
AAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGC
CGAATCTACTAAGGACTAAATGGCAGAGGTAGTGGATGTTTTCTCGCAGA
GTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGACTCGGAT
GAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGA
AGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAA
TGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCATCAATCCA
GAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAA
GAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCA
AAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCG
CATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGACCTGTGGT
GAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAG
ATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGACTTGATC
ATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTGTTGCCGGAAG
TGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAG
CACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAAATGGCAGAGGTA
GTGGATGTTTTCTCGCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGG
AGGCAAGCTCGACTCGGATGAGGAGGATGACGATGATGACATCGAGGCCC
AAATCAGAAGAGAGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGC
CCGTTTCATGCCATCAGAATGGATTTGCCATGTCTGTTGTTTGTGCGATT
TGACAAATCCATCAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACG
CAGCTGCTAATCCTGAAAAGAAACGATCCCGATGGATCCAACGCATGACA
CCTGCAATTTCCGTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGC
ACGGGAAATACTCAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGT
ACGCAATTCGACCTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATT
GTCATCAAGACCGTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCT
CAAGAACTATGACTTGATCATTCTCGTCACCGTTATCCAGAATGTCATTG
GCATGAGTGTTGCCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTG
GCCGAGTTATACAGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAA
GGACTAAATGGCAGAGGTAGTGGATGTTTTCTCGCAGAGTGTGGAATCAT
CCAGCAGTGACAGTCATGGAGGCAAGCTCGACTCGGATGAGGAGGATGAC
GATGATGACATCGAGGCCCAAATCAGAAGAGAGGTCGAAGGCCTGAAGCC
CAGCGCGAGCAAGTCCCGCCCGTTTCATGCCATCAGAATGGATTTGCCAT
GTCTGTTGTTTGTGCGATTTGACAAATCCATCAATCCAGAGGAAATGGTA
CATCAGCTTTGCTTAGACGCAGCTGCTAATCCTGAAAAGAAACGATCCCG
ATGGATCCAACGCATGACACCTGCAATTTCCGTTCGCAAAACTCTCAGTG
TCGACCTGGAGTCTTTTGCACGGGAAATACTCAAACCGCATTTCCATTCC
GGGGGACCTCCCAAAAAGTACGCAATTCGACCTGTGGTGAGAAGCAACAA
GAAGTTCAACCGCGACATTGTCATCAAGACCGTTGCAGATGTCGTGGGGC
CCGAACATCCCGTTGATCTCAAGAACTATGACTTGATCATTCTCGTCACC
GTTATCCAGAATGTCATTGGCATGAGTGTTGCCGGAAGTGACTATGATCG
GTTAAAGAAGTATAACCTGGCCGAGTTATACAGTCCAGCACCTACGTCAG
AGGCCGCCGAATCTACTAAGGACTAAATGGCAGAGGTAGTGGATGTTTTC
TCGCAGAGTGTGGAATCATCCAGCAGTGACAGTCATGGAGGCAAGCTCGA
CTCGGATGAGGAGGATGACGATGATGACATCGAGGCCCAAATCAGAAGAG
AGGTCGAAGGCCTGAAGCCCAGCGCGAGCAAGTCCCGCCCGTTTCATGCC
ATCAGAATGGATTTGCCATGTCTGTTGTTTGTGCGATTTGACAAATCCAT
CAATCCAGAGGAAATGGTACATCAGCTTTGCTTAGACGCAGCTGCTAATC
CTGAAAAGAAACGATCCCGATGGATCCAACGCATGACACCTGCAATTTCC
GTTCGCAAAACTCTCAGTGTCGACCTGGAGTCTTTTGCACGGGAAATACT
CAAACCGCATTTCCATTCCGGGGGACCTCCCAAAAAGTACGCAATTCGAC
CTGTGGTGAGAAGCAACAAGAAGTTCAACCGCGACATTGTCATCAAGACC
GTTGCAGATGTCGTGGGGCCCGAACATCCCGTTGATCTCAAGAACTATGA
CTTGATCATTCTCGTCACCGTTATCCAGAATGTCATTGGCATGAGTGTTG
CCGGAAGTGACTATGATCGGTTAAAGAAGTATAACCTGGCCGAGTTATAC
AGTCCAGCACCTACGTCAGAGGCCGCCGAATCTACTAAGGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006067KJC3_006067Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006067-T1KJC3_006067-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006067-T1.utr5p1KJC3_006067-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006067-T1.exon1KJC3_006067-T1.exon1Aspergillus niger KJC3exon
KJC3_006067-T1.exon2KJC3_006067-T1.exon2Aspergillus niger KJC3exon
KJC3_006067-T1.exon3KJC3_006067-T1.exon3Aspergillus niger KJC3exon
KJC3_006067-T1.exon4KJC3_006067-T1.exon4Aspergillus niger KJC3exon
KJC3_006067-T1.exon5KJC3_006067-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006067-T1.cdsKJC3_006067-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006067-T1.utr3p1KJC3_006067-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264829
DBxrefInterPro:IPR040183
DBxrefInterPro:IPR004114
DBxrefPFAM:PF02926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4577852..4579485 +
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