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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4579728..4581713+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006069-T1 ID=KJC3_006069-T1|Name=KJC3_006069-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1986bp|location=Sequence derived from alignment at ch4:4579728..4581713+ (Aspergillus niger KJC3)
GCTTCTTGGGGTCTTCTTTCTCCAATTTCAACAGTGGGGATCCCGGACGA
ATGTCCCCTTCAGTAAGGGGCTTCGGATATGGAGCTTCCGCTTCGCTTAA
TGTTTTCAAATAAGGGATATGCTCCATGTCCTCGTTACGGGCTTCCCCCA
TCATCTGACGCTCAGAAACGAGATAGATCGACCGGTTTCCCTGTTCCTAG
TATTCCTTAGCTGTGTTGCTTTGACGGTTAGACAATCTATTACCTTCCTT
GTTCGATTGCAGTAACCTGCGTCTTACCTCTGTTCCATGTCCGGGTCCCG
TTGTATCCCCGGGTTGCGGCTGCCTGGCTTTTCTCCCCGATGGCTGCAGT
AAAGATTTGCTCGCTCATGTTATATTTGCTTACCTCCCCCTCCCCCCCAG
CGCTATGGATCATCATAACTATATCTAGTACTAGTAGCGAGCATGCGAGC
GCTGAGGCAACATAACTGAAGTGTTGCGCGAAATGTCGCCTTCTTTATCA
CCGATCTTAATCCCTGACATTGAACCTTCTTATACTCTCGGCTCCATCCT
TCAACGCCACTTTTCTTCTTCGGTACAGGTCAAAGGAATCTATCCGCTCA
AGGGCCACCTACATTCAATTAGTCGCCTCGTACTGTCGAACGGGGTCCAC
CTGCTTCTGAAGTGCTCTCCAGGGCCGACAACGCCTCTCTTACGGCGAGA
ACAGCTGCTACTTGAAACTGAAGCCCGTGCCCACTCCATCCTAGAACAAC
AGGAAACCCCATACATCCCGTCATTCCTGCATTATGGTCTCCACGGGGGA
CCGCTGGGCTCTGCCTTCTTAGTAAGACACTATATCAATGGGGCGACAAT
GCAGGAGCTGGAATCCGCGCTTACCATGCAAGAGCGGGATGATCTCAACC
GGGCTCTGGGGTCTTTAGCTCGTGAGATCGGACAGAATTTCTCCAGCTCC
TTTGGGTCACTAGACCAGGTAGCCTGTGGATCAGGGAAGCAGTCCTGGCG
AGAAGCGTTTGTGACGCTTCTAGAAGGCATTCTCCGGGACTCCGAAGACG
CTTTTGTTCATCTTCCATATGCGGAGATTCGAAACCAAGTTCGTCGGCTG
TCCCCTGCGCTCGAGGAAATTACGTCACCGCAACTAGTGATTGTTGGGTT
AGGCCGGCCGTCGCAGGTGGTGCTGAATCCGGGGTCGAAGAAGCTTGCAG
GGCTCTTAGGGCTAGAGAACACTCTCTGGGGCGATGTGCATATGGCAGAG
ATCTTTGAGGCGCCGTCTCCGGCTGTGTTGGAGGGCTTTGGTACTCGACC
GAAGACAAATAAGGCCCAGGTGGCCCGACAACTACTGTATGCAATCTCTG
GATGAGACTGAAAATGGTGGGAGAGTCTATGAGCTGACTGTCGGTCCCTT
AGGTATGCCTGCTATCGTGCTGTGCACCAGGTTACGATACACTACTACCG
CGATCAGGGGATGGCTGCAGAGATCGATGCTAGGAGACGTCTAACGTCAG
TCTTAGCTGAGATGGCCTCCGTAGACGGAGTCTGCACGTTGTGTTGAAAT
GGGATGTCCAGGGACATCTCTGGAAGATTATATAGATGGGAACAATGACT
CGGATTTAGTTAGTTCAGTCGGCCGGACCGATCTGCAGTTAGACTTCAGA
TGGAAGTCTCAAGAATGGGAAAGGTTCCTTAGTGCTACACAGCAGTGTTC
GACCATGAGCTACATGATGAATATGAATATGATCGGTTTCGGAGAAATCA
TATGAAAACAAAAGCCAATAGTCCAATGCAAGATTCGGTCATGTCGGCAT
GGAAGCTGTCTTGGCGATGATTTGTTGCTGCCTACGAAGATTGGCGAGGT
TCTCCTTGGAAGTTGATTTCCACCCATGTAAGAGATCTGGTTCCTGAGAA
AATACGAACTCATTCCGTGCTGGAATGTATACGGAGAGCCCCGTTTTGAG
ATAGCAATGTAGAGAGAGCCCTATTAAGAATCATTT back to topCoding sequence (CDS) from alignment at ch4:4579728..4581713+ >KJC3_006069-T1 ID=KJC3_006069-T1|Name=KJC3_006069-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch4:4579728..4581713+ (Aspergillus niger KJC3)
ATGTCGCCTTCTTTATCACCGATCTTAATCCCTGACATTGAACCTTCTTA
TACTCTCGGCTCCATCCTTCAACGCCACTTTTCTTCTTCGGTACAGGTCA
AAGGAATCTATCCGCTCAAGGGCCACCTACATTCAATTAGTCGCCTCGTA
CTGTCGAACGGGGTCCACCTGCTTCTGAAGTGCTCTCCAGGGCCGACAAC
GCCTCTCTTACGGCGAGAACAGCTGCTACTTGAAACTGAAGCCCGTGCCC
ACTCCATCCTAGAACAACAGGAAACCCCATACATCCCGTCATTCCTGCAT
TATGGTCTCCACGGGGGACCGCTGGGCTCTGCCTTCTTACGGGATGATCT
CAACCGGGCTCTGGGGTCTTTAGCTCGTGAGATCGGACAGAATTTCTCCA
GCTCCTTTGGGTCACTAGACCAGGTAGCCTGTGGATCAGGGAAGCAGTCC
TGGCGAGAAGCGTTTGTGACGCTTCTAGAAGGCATTCTCCGGGACTCCGA
AGACGCTTTTGTTCATCTTCCATATGCGGAGATTCGAAACCAAGTTCGTC
GGCTGTCCCCTGCGCTCGAGGAAATTACGTCACCGCAACTAGTGATTGTT
GGGTTAGGCCGGCCGTCGCAGGTGGTGCTGAATCCGGGGTCGAAGAAGCT
TGCAGGGCTCTTAGGGCTAGAGAACACTCTCTGGGGCGATGTGCATATGG
CAGAGATCTTTGAGGCGCCGTCTCCGGCTGTGTTGGAGGGCTTTGGTACT
CGACCGAAGACAAATAAGGCCCAGGTGGCCCGACAACTACTGTATGCAAT
CTCTGGATGAATGTCGCCTTCTTTATCACCGATCTTAATCCCTGACATTG
AACCTTCTTATACTCTCGGCTCCATCCTTCAACGCCACTTTTCTTCTTCG
GTACAGGTCAAAGGAATCTATCCGCTCAAGGGCCACCTACATTCAATTAG
TCGCCTCGTACTGTCGAACGGGGTCCACCTGCTTCTGAAGTGCTCTCCAG
GGCCGACAACGCCTCTCTTACGGCGAGAACAGCTGCTACTTGAAACTGAA
GCCCGTGCCCACTCCATCCTAGAACAACAGGAAACCCCATACATCCCGTC
ATTCCTGCATTATGGTCTCCACGGGGGACCGCTGGGCTCTGCCTTCTTAC
GGGATGATCTCAACCGGGCTCTGGGGTCTTTAGCTCGTGAGATCGGACAG
AATTTCTCCAGCTCCTTTGGGTCACTAGACCAGGTAGCCTGTGGATCAGG
GAAGCAGTCCTGGCGAGAAGCGTTTGTGACGCTTCTAGAAGGCATTCTCC
GGGACTCCGAAGACGCTTTTGTTCATCTTCCATATGCGGAGATTCGAAAC
CAAGTTCGTCGGCTGTCCCCTGCGCTCGAGGAAATTACGTCACCGCAACT
AGTGATTGTTGGGTTAGGCCGGCCGTCGCAGGTGGTGCTGAATCCGGGGT
CGAAGAAGCTTGCAGGGCTCTTAGGGCTAGAGAACACTCTCTGGGGCGAT
GTGCATATGGCAGAGATCTTTGAGGCGCCGTCTCCGGCTGTGTTGGAGGG
CTTTGGTACTCGACCGAAGACAAATAAGGCCCAGGTGGCCCGACAACTAC
TGTATGCAATCTCTGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006069-T1.utr5p1 | KJC3_006069-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006069-T1.utr3p1 | KJC3_006069-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4579728..4581713 + |
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