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KJC3_006071-T1, KJC3_006071-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006071-T1
Unique NameKJC3_006071-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4586311..4588036-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006071-T1 ID=KJC3_006071-T1|Name=KJC3_006071-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1726bp|location=Sequence derived from alignment at ch4:4586311..4588036- (Aspergillus niger KJC3)
GCATCCCCATTCATTCAGTTGCCAAAGAGATCGTCTGATCTTCTTTTCTC
TCTTGTCTCCTCCCTCCTCCCTTTTCATACCTCTTATATATCTCCGCAAC
CTCTTCGTCTCATTCCTCTCTCCATCACATTTCTCCACGTCTAATCCTTC
TCGTTCACTAAACCACTCTTTCCACCCCCCTCTCTCCATATTACTCAATA
AAGCAATTCCCTCCACTACCGCCCCTCCATCGCGATGTCGGTCGTTTCTC
TTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTAT
CAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGTACGCT
GTGAACCCCGCTCCCGTTAATTGGCCGCCACTAACGAGTTTCCAGATCTG
GAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCGTAAGTTGGACCTGA
AGCGAGATAAAATCAGATCTATCTGCTAACCACCTGTTTCTCTAGCTCCG
AGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGT
GTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCC
TACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATG
ACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGAT
TCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCAT
TCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCA
AATGGTAGGTATCATCTATTTGTTTTTCTTGTCATACGATACTAATAACT
ACCGCCTAGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATC
AGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAG
GAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCC
TAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGG
AAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGAT
GAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGG
CGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAG
CCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAG
TTGATGGTGCACTAAAGCAAATGAAGAGCCCCGAAGTTATACTACCTTTC
TTTATCTTCTATTCCGTCGAATGATTTTACGACTGGGTTGCAACGTGTTT
CATGACAACATTCTCATCTATCATATCCCCCGCCACCTTCACATCTTTGC
AAGTACTTAGCTTATGACATAGAACCGACCAGCCAAACAAACATAATTCG
AAAAAATGCACATACTTGATTCCAACTCATCTCTCTCTCTCTCTATCTAT
CTTACCCCTCCACATTCCTCACCGCATCAAATGCAAGGGCAATCTGAAAA
GACCCAAGCTACCATGGCAACTGCATGTCATCCCTAACCGAGTACGTTAG
CTGAAGAACCAACGCAAGGCCAAAAAGCAAGTTCCCAACAGGGCAAAACC
CAAACAAGTAGTCTAGCTTACACAATGGAATTGATCTACAACACATAACT
GCATATTCGAATGATATTAATTCCCG
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Coding sequence (CDS) from alignment at ch4:4586311..4588036-

>KJC3_006071-T1 ID=KJC3_006071-T1|Name=KJC3_006071-T1|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch4:4586311..4588036- (Aspergillus niger KJC3)
GGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAG
CCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAG
CTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGA
AGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGG
AGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGAC
GAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGA
CGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCG
CCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTG
CACTAACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGA
TCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTC
AAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCAC
TTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACA
ACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATC
ATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCG
GTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCG
ACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCT
GCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGA
ACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCC
AGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTG
CAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTG
GAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCAC
CAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCG
AAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGAC
GACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGA
ATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGC
CCGAGTTGATGGTGCACTAACTCCGAGTATGACCAGGAACTCGACTCCCT
GCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCG
ACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACC
GTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGG
TTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGC
CGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAG
CCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCT
ACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAA
TCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACT
TTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCC
GCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAG
TGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGG
AGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACC
GAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGA
GTCTGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACG
AGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCC
GAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGC
CCATCAACAACAGCCCGAGTTGATGGTGCACTAACTCCGAGTATGACCAG
GAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTT
CATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAA
TCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAA
TTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCT
TATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATA
TCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGA
GTGGAAGCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCT
TCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATC
AATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGG
AGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAG
GAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGC
AGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGG
AGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGAT
ATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGACGAAGATGA
GGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAA
TGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAAC
AACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAACT
CCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTT
GGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCAT
CCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCT
ATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATAC
GATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACG
CATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCA
TCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCATG
TCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTT
CCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGC
AGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0006333chromatin assembly or disassembly
GO:0016573histone acetylation
GO:0006337nucleosome disassembly
GO:0006334nucleosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1KJC3_006071Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006071-T1KJC3_006071-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006071-T1.cdsKJC3_006071-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006071-T1.utr3p1KJC3_006071-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006071-T1.exon4KJC3_006071-T1.exon4Aspergillus niger KJC3exon
KJC3_006071-T1.exon3KJC3_006071-T1.exon3Aspergillus niger KJC3exon
KJC3_006071-T1.exon2KJC3_006071-T1.exon2Aspergillus niger KJC3exon
KJC3_006071-T1.exon1KJC3_006071-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006071-T1.utr5p1KJC3_006071-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264COX
DBxrefInterPro:IPR006818
DBxrefInterPro:IPR036747
DBxrefInterPro:IPR017282
DBxrefPFAM:PF04729
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4586311..4588036 -
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