You are here

Home

KJC3_006074-T1, KJC3_006074-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006074-T1
Unique NameKJC3_006074-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4594032..4595934-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006074-T1 ID=KJC3_006074-T1|Name=KJC3_006074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1903bp|location=Sequence derived from alignment at ch4:4594032..4595934- (Aspergillus niger KJC3)
ATTGAGTCTTCTGACCCTGACCGTGACCTTGGTTTTCTCCCTTGCTTCCT
TTCTCTTAACCTTTCGGACCCAATTGCACCAGCTCGTGATCTCCACCCCG
GAAGACGTGTGTGCGCGTGTGTGGGCATCGTGACTTGGTACTACTAGTAC
TTTACTACCATTTCTACTAGACCCTCTCACCCTAAACTCCCCCCCAACTC
TCTCTTTTACTTTACCTACACCACGACACCACCCTTTTCTAAAGCTCCTA
TTCTCCGGGGCACATCACACCCTCAAATGCACTCTACCATGTCCGCATCA
CACCCCAGCCCCGTCAAAGACGGTAGGCGAGTCCTCGGCGAGAAGCACGC
CAACGCGTGCCTGTCACCCGCCCACCATCGGCACGTTTCTGTCTCGCCCC
TCAAACAACGCCCTCTCCTTGAGACCTCCTCCTCTCCTAAGAAGCTCCTT
CCTTCGCCTCTCTTTGCTGGCCAGAAACGCTCTATCGATCAGGTGGATAG
CACCAGCGAACCCCAGATCAGCCATGCCAGCGCGCAGCCCCAGTCGCGGC
CAGAAGCATCTCCGAACGTGCAGCATGACGTTCAGCAGGACCCTCAGGTA
TGTACCACAACAATTCCACACAACACACAGCCAAAAATGCGTCAAATCGT
CCATTGACTCTAACAAAAGCCGATCCAGCCACACGCGACGCCTGAGACAC
CCACACAGCTTCTAGAATCACAACAACACCAACCACAAGAAGATACCCAC
CCCGACCAAACATCAACAACGACGTCAACGCCCCTCATCCCCGAAGATCC
AGCAACCCGCAAGCGCTTCATTCAAGAAGTATGTACTTAAAAACTCTATT
CATATTGACAAAGAAACTAACAAATCCCCAAGAAAGCAACCCTCCTCCGC
ACGCGCCTTCAAACAGCTATGCGTCACATCCACGACCCCCAACTCGATCG
CCGTCTCTCCGCCCTAGAAGCCCACAGTCGCAAATACCCTCGTCTATCTC
TCCCCCAAGAACAGCGAATCATGACTACGCCGAATTCCTCTTCTACATCA
TCATCTTCCTCCCAAAACCAGAACCAGACCACCCCGCGCCCTTACCAACC
CACTACACACCTCCCGCTGCATGAAACCGAGACCCAGAACGCGTCCGGCC
TCTCTTCCCCACCCCTATCAACGGGAACGATCGCAACACAGAAGGAACCG
GAACAAGAATCACAGACACCCGCACAAAGAGAAGAACGCGATGATGACGA
TGACCCCATGAAAACACCCACCCAGAAATCAACAACACTTCACACCCACA
CCCACCGCAGAACAAATACCCTCGGCTCCCCAATGCAATTGAGTAGTCCT
CCGGCGACGGTATCGAGGCGTAGAAATACAGAGACTAGCAGTGGAGAAGA
AGAAGAAGGGCCACAAGAGAGACAACGCCGGTTATCGCAAAAGGGGGATG
CAGTGGATGGATTGTTGAAGTTAATGGGAACGGGAGAGGGTGTTGTTAGT
GGAACTGCTGGGGTCGCGTGAGTGGTTTAACTTGTTTTTGGTTTGGACTT
TGGTTATAGATGGTATTGGAGTTGGGGTTGGGTTCGTTGGTCAAAATTGG
ATTTGTGTGGAGTTTGTGCTTGCTTGCTTGCTTGGTGGCTTTCCTGTCAT
TTTGTTTTGGGGAAGCGTGTATTAGTATGGGATTGCTGGGGTGCATGTAT
GTGCCGTGGATGGGATGGTGGAAGACATACACATAGATAGATAGACAGAC
GTTACATACGTGACTACTTAGGACCCATCGCACCACCAATGGGTTCAAGT
GGGAAGTCAATGATATGATACCAACATTGGAATGAAAGTCAAATCTACAT
GCCATTGCTAAGTTAAACGACATTATATACAAACAACTTCTATGTGCATA
GTA
back to top

Coding sequence (CDS) from alignment at ch4:4594032..4595934-

>KJC3_006074-T1 ID=KJC3_006074-T1|Name=KJC3_006074-T1|organism=Aspergillus niger KJC3|type=CDS|length=3357bp|location=Sequence derived from alignment at ch4:4594032..4595934- (Aspergillus niger KJC3)
AAAGCAACCCTCCTCCGCACGCGCCTTCAAACAGCTATGCGTCACATCCA
CGACCCCCAACTCGATCGCCGTCTCTCCGCCCTAGAAGCCCACAGTCGCA
AATACCCTCGTCTATCTCTCCCCCAAGAACAGCGAATCATGACTACGCCG
AATTCCTCTTCTACATCATCATCTTCCTCCCAAAACCAGAACCAGACCAC
CCCGCGCCCTTACCAACCCACTACACACCTCCCGCTGCATGAAACCGAGA
CCCAGAACGCGTCCGGCCTCTCTTCCCCACCCCTATCAACGGGAACGATC
GCAACACAGAAGGAACCGGAACAAGAATCACAGACACCCGCACAAAGAGA
AGAACGCGATGATGACGATGACCCCATGAAAACACCCACCCAGAAATCAA
CAACACTTCACACCCACACCCACCGCAGAACAAATACCCTCGGCTCCCCA
ATGCAATTGAGTAGTCCTCCGGCGACGGTATCGAGGCGTAGAAATACAGA
GACTAGCAGTGGAGAAGAAGAAGAAGGGCCACAAGAGAGACAACGCCGGT
TATCGCAAAAGGGGGATGCAGTGGATGGATTGTTGAAGTTAATGGGAACG
GGAGAGGGTGTTGTTAGTGGAACTGCTGGGGTCGCGTGACCGATCCAGCC
ACACGCGACGCCTGAGACACCCACACAGCTTCTAGAATCACAACAACACC
AACCACAAGAAGATACCCACCCCGACCAAACATCAACAACGACGTCAACG
CCCCTCATCCCCGAAGATCCAGCAACCCGCAAGCGCTTCATTCAAGAAAT
GCACTCTACCATGTCCGCATCACACCCCAGCCCCGTCAAAGACGGTAGGC
GAGTCCTCGGCGAGAAGCACGCCAACGCGTGCCTGTCACCCGCCCACCAT
CGGCACGTTTCTGTCTCGCCCCTCAAACAACGCCCTCTCCTTGAGACCTC
CTCCTCTCCTAAGAAGCTCCTTCCTTCGCCTCTCTTTGCTGGCCAGAAAC
GCTCTATCGATCAGGTGGATAGCACCAGCGAACCCCAGATCAGCCATGCC
AGCGCGCAGCCCCAGTCGCGGCCAGAAGCATCTCCGAACGTGCAGCATGA
CGTTCAGCAGGACCCTCAGAAAGCAACCCTCCTCCGCACGCGCCTTCAAA
CAGCTATGCGTCACATCCACGACCCCCAACTCGATCGCCGTCTCTCCGCC
CTAGAAGCCCACAGTCGCAAATACCCTCGTCTATCTCTCCCCCAAGAACA
GCGAATCATGACTACGCCGAATTCCTCTTCTACATCATCATCTTCCTCCC
AAAACCAGAACCAGACCACCCCGCGCCCTTACCAACCCACTACACACCTC
CCGCTGCATGAAACCGAGACCCAGAACGCGTCCGGCCTCTCTTCCCCACC
CCTATCAACGGGAACGATCGCAACACAGAAGGAACCGGAACAAGAATCAC
AGACACCCGCACAAAGAGAAGAACGCGATGATGACGATGACCCCATGAAA
ACACCCACCCAGAAATCAACAACACTTCACACCCACACCCACCGCAGAAC
AAATACCCTCGGCTCCCCAATGCAATTGAGTAGTCCTCCGGCGACGGTAT
CGAGGCGTAGAAATACAGAGACTAGCAGTGGAGAAGAAGAAGAAGGGCCA
CAAGAGAGACAACGCCGGTTATCGCAAAAGGGGGATGCAGTGGATGGATT
GTTGAAGTTAATGGGAACGGGAGAGGGTGTTGTTAGTGGAACTGCTGGGG
TCGCGTGACCGATCCAGCCACACGCGACGCCTGAGACACCCACACAGCTT
CTAGAATCACAACAACACCAACCACAAGAAGATACCCACCCCGACCAAAC
ATCAACAACGACGTCAACGCCCCTCATCCCCGAAGATCCAGCAACCCGCA
AGCGCTTCATTCAAGAAATGCACTCTACCATGTCCGCATCACACCCCAGC
CCCGTCAAAGACGGTAGGCGAGTCCTCGGCGAGAAGCACGCCAACGCGTG
CCTGTCACCCGCCCACCATCGGCACGTTTCTGTCTCGCCCCTCAAACAAC
GCCCTCTCCTTGAGACCTCCTCCTCTCCTAAGAAGCTCCTTCCTTCGCCT
CTCTTTGCTGGCCAGAAACGCTCTATCGATCAGGTGGATAGCACCAGCGA
ACCCCAGATCAGCCATGCCAGCGCGCAGCCCCAGTCGCGGCCAGAAGCAT
CTCCGAACGTGCAGCATGACGTTCAGCAGGACCCTCAGAAAGCAACCCTC
CTCCGCACGCGCCTTCAAACAGCTATGCGTCACATCCACGACCCCCAACT
CGATCGCCGTCTCTCCGCCCTAGAAGCCCACAGTCGCAAATACCCTCGTC
TATCTCTCCCCCAAGAACAGCGAATCATGACTACGCCGAATTCCTCTTCT
ACATCATCATCTTCCTCCCAAAACCAGAACCAGACCACCCCGCGCCCTTA
CCAACCCACTACACACCTCCCGCTGCATGAAACCGAGACCCAGAACGCGT
CCGGCCTCTCTTCCCCACCCCTATCAACGGGAACGATCGCAACACAGAAG
GAACCGGAACAAGAATCACAGACACCCGCACAAAGAGAAGAACGCGATGA
TGACGATGACCCCATGAAAACACCCACCCAGAAATCAACAACACTTCACA
CCCACACCCACCGCAGAACAAATACCCTCGGCTCCCCAATGCAATTGAGT
AGTCCTCCGGCGACGGTATCGAGGCGTAGAAATACAGAGACTAGCAGTGG
AGAAGAAGAAGAAGGGCCACAAGAGAGACAACGCCGGTTATCGCAAAAGG
GGGATGCAGTGGATGGATTGTTGAAGTTAATGGGAACGGGAGAGGGTGTT
GTTAGTGGAACTGCTGGGGTCGCGTGACCGATCCAGCCACACGCGACGCC
TGAGACACCCACACAGCTTCTAGAATCACAACAACACCAACCACAAGAAG
ATACCCACCCCGACCAAACATCAACAACGACGTCAACGCCCCTCATCCCC
GAAGATCCAGCAACCCGCAAGCGCTTCATTCAAGAAATGCACTCTACCAT
GTCCGCATCACACCCCAGCCCCGTCAAAGACGGTAGGCGAGTCCTCGGCG
AGAAGCACGCCAACGCGTGCCTGTCACCCGCCCACCATCGGCACGTTTCT
GTCTCGCCCCTCAAACAACGCCCTCTCCTTGAGACCTCCTCCTCTCCTAA
GAAGCTCCTTCCTTCGCCTCTCTTTGCTGGCCAGAAACGCTCTATCGATC
AGGTGGATAGCACCAGCGAACCCCAGATCAGCCATGCCAGCGCGCAGCCC
CAGTCGCGGCCAGAAGCATCTCCGAACGTGCAGCATGACGTTCAGCAGGA
CCCTCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006074KJC3_006074Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006074-T1KJC3_006074-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006074-T1.cdsKJC3_006074-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006074-T1.utr3p1KJC3_006074-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006074-T1.exon3KJC3_006074-T1.exon3Aspergillus niger KJC3exon
KJC3_006074-T1.exon2KJC3_006074-T1.exon2Aspergillus niger KJC3exon
KJC3_006074-T1.exon1KJC3_006074-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006074-T1.utr5p1KJC3_006074-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4594032..4595934 -
Powered by Drupal