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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4618759..4619749- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006081-T1 ID=KJC3_006081-T1|Name=KJC3_006081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=991bp|location=Sequence derived from alignment at ch4:4618759..4619749- (Aspergillus niger KJC3)
TTCAGATCTCCAGCGGTGCCTTGAGATCTTCATCCAACCGGCCATCACCA
GCCATGATGGTCGGCCTCAGGCGGCCGATCTATCCACTTACCATCCCTTT
AAACCGTCCGGATTATTAATTTCTCCGAGACAACTTGCCGCGGGCGGAGA
GTCGAGTCCTTTGACCCTGATTGGTGGAACACCCTGTTGTGTCACCAAGC
CTCAGGCTTAACTCAGTTGGTGGCTGGACCTCACAGTTGCCTCTTTTTTC
CTCTCTTCAAGGGTGCAACAACGCGTTTTTCCTTCTCCTTTCGCTTATCA
CCAGCCCCCTACGGTGCGCTGGCTTCATCCCTTTTGCACTCAAGCTTTGG
CCTAGCTTGTGTTGCCACGGATTCCGCCTATTAACGTAGTCCATACTGAA
GATGTTTCGGGCTTTTCTCAAAAGCGCATTCCTGCTACGGCCCCTCGAGG
TGCGTCTGAGGCAGAGGTATCTGGACTATCGCACACAAGCTCCATACTAA
CAGTTTCCTTCATACAGGAATGGCTTACCGCTAGGGTAGGTGTATGATAA
TGTCAATTACTTGAGCTTGATGCTCATGTTGCCACATATAGCTGCTGGCC
AGCCGGTCGTTCCATAAACTGGTTGGGGGGATTCACCGCAAAGTCCATCA
CCTGAAGACTGGTGTCCCACTGGAAGAGGTGCATGGCCCTGACTCTGGAA
AGTCTGGTATGAAGTTCGCCCATGCCGTGAATTGGTCGTGGTAGCTGTGT
AGTATCCTTTGATACTAACCTGCCCCTCACTCTAGCTTCGAAGTTGAACC
AATTCTTTGAGTACTTCAAGGAAGAGCTGAAGGACCAGGTGAAAGGGAAC
CCCCGCAATAAGCATTGATGAGAAGGTGGAGTTTCTTCCATCCGGGCTTT
TGTGACAGCCCTACTTTCTATGACTTGTGATACCCATCAATATTCATATA
CTCTTTTTCTGTTTTTATGTTATTGTTGCTGTCCATTCTTC back to topCoding sequence (CDS) from alignment at ch4:4618759..4619749- >KJC3_006081-T1 ID=KJC3_006081-T1|Name=KJC3_006081-T1|organism=Aspergillus niger KJC3|type=CDS|length=1056bp|location=Sequence derived from alignment at ch4:4618759..4619749- (Aspergillus niger KJC3)
CTTCGAAGTTGAACCAATTCTTTGAGTACTTCAAGGAAGAGCTGAAGGAC
CAGGTGAAAGGGAACCCCCGCAATAAGCATTGACTGCTGGCCAGCCGGTC
GTTCCATAAACTGGTTGGGGGGATTCACCGCAAAGTCCATCACCTGAAGA
CTGGTGTCCCACTGGAAGAGGTGCATGGCCCTGACTCTGGAAAGTCTGGA
ATGGCTTACCGCTAGGATGTTTCGGGCTTTTCTCAAAAGCGCATTCCTGC
TACGGCCCCTCGAGCTTCGAAGTTGAACCAATTCTTTGAGTACTTCAAGG
AAGAGCTGAAGGACCAGGTGAAAGGGAACCCCCGCAATAAGCATTGACTG
CTGGCCAGCCGGTCGTTCCATAAACTGGTTGGGGGGATTCACCGCAAAGT
CCATCACCTGAAGACTGGTGTCCCACTGGAAGAGGTGCATGGCCCTGACT
CTGGAAAGTCTGGAATGGCTTACCGCTAGGATGTTTCGGGCTTTTCTCAA
AAGCGCATTCCTGCTACGGCCCCTCGAGCTTCGAAGTTGAACCAATTCTT
TGAGTACTTCAAGGAAGAGCTGAAGGACCAGGTGAAAGGGAACCCCCGCA
ATAAGCATTGACTGCTGGCCAGCCGGTCGTTCCATAAACTGGTTGGGGGG
ATTCACCGCAAAGTCCATCACCTGAAGACTGGTGTCCCACTGGAAGAGGT
GCATGGCCCTGACTCTGGAAAGTCTGGAATGGCTTACCGCTAGGATGTTT
CGGGCTTTTCTCAAAAGCGCATTCCTGCTACGGCCCCTCGAGCTTCGAAG
TTGAACCAATTCTTTGAGTACTTCAAGGAAGAGCTGAAGGACCAGGTGAA
AGGGAACCCCCGCAATAAGCATTGACTGCTGGCCAGCCGGTCGTTCCATA
AACTGGTTGGGGGGATTCACCGCAAAGTCCATCACCTGAAGACTGGTGTC
CCACTGGAAGAGGTGCATGGCCCTGACTCTGGAAAGTCTGGAATGGCTTA
CCGCTAGGATGTTTCGGGCTTTTCTCAAAAGCGCATTCCTGCTACGGCCC
CTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006081-T1.utr3p1 | KJC3_006081-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006081-T1.utr5p1 | KJC3_006081-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020301 |
| DBxref | PFAM:PF10906 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4618759..4619749 - |
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