You are here

Home

KJC3_006083-T1, KJC3_006083-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006083-T1
Unique NameKJC3_006083-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4622838..4624462-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006083-T1 ID=KJC3_006083-T1|Name=KJC3_006083-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1625bp|location=Sequence derived from alignment at ch4:4622838..4624462- (Aspergillus niger KJC3)
GTCTGTCTGTCTGTATCGTAAGCTAAACCACATGACATGCCATCATCTTC
ATCGCTTCATCATCCAGTTTTCCTCTTCCGGCCTTTCTTTCTCCCCTCCA
CGGCCTCCTCTTTCTACACATCTCCCCCCTTAAACGTCCTACTTCCAGAT
CGCCCATCATGCGAATCCGTTACCCTTTCGCGGGTATGTCTTTTCCCCCA
ATCCTCTCCATCCATTGAGCTCTTCTACCCGCTTCCACCTCTTCCGAAGC
CAAAGTGCAGCTCTATGATACCCAATCGTCCGATTACCTCAAGAGCTTCA
CCAGCTCCCCATACCACCAACTATTACCAAAATACTTCCGTAATATGCAT
CGCTAACTCCACTCCCATCAGGCGCCTTTCTTTTCCTCCTCATCCTCGCC
GCCTACATCGGCCTCCTCCCGCACAGCACATCATCTACTCTTCCGTCCCA
ACTTCAACCCAATGACAAGTTCCTCCATGTCGTCACCTTCTTCCTCCTCT
CCCTCATATTCTACTGGATCTTCGACACTACCCGTCGTCGCACCCTTCAC
CTAACCCTCGTCGTCTGCACTCTCGTCCTCGGCATTGGCTCCGAAATCGT
CCAAGGTCTCCTTCCCAACGGCAGGTCCTTCGATGCGTTCGACCTCCTCG
CCAACATCGTCGGCAGTCTCGGCGCCGTCGGCCTTTGCGGTTGGTACCAC
CGGCGCATGCTTGACCGGCGACGCAAGGCGCGCTTCGGTTCCCTGGGCGG
CGACGGCACAGAGAACGATGTCGAGCTCGGAGTGACGGGCCACCACAGCG
ACGAGGAGGAGGGTCTGGGACCCCAGGAAACAGGCGTTATGAGCCTAGAG
CAGGAGGTAGATAACTGGGATGAGAACGCTGTCGATAATTGGGATGAGGA
GGACGAGTCTGGAGATTTGGCCGTTGATACCTCGAAGAGGACGTCGCCGG
CTGAAGATGGAAAGAAGCGGAGTGATTAAAGTCGCAACCTAGCTAGCTAG
CTAGCTAGATCTCTGGCTTTCGCGCCTCCTCCTCGCTAGCTATCTATTGA
CCGTCTATCATGCTTCTCACGTCTCTTGTGCCGTGAAGTCCGCTTTGTTC
CGCAGAATAGCGTTTCTGCCGAGCATGAGATTATGATGTATACGCTTACT
TGGCGTGGATGCACTCATCACCACCTGTCGCTCTCTATCACGCATGCACT
CTCTATATGCTAAATGCCCCACCGCGACAACCCGATATAACCCTAACTCA
TACACGTCACACCCCGTCGTCATATGATAGGGAAGCTATTTGAACCCCGC
CCGATTCGATGATTGCTATGCTACGCAGACAGAAAGGAAACGAAAGGGAA
AAAGTTACCATACCTATCTATTCACACCTACTACTTTCGCTACGACCGTG
TCATGACCCGACCCGTATCTACCGGCGTTTTGAGTTGATCTTTACATTCT
GTTCGTGTTTTCTCTATATCTGCGTCTCTCCTCTACGACCTTATCTATCT
CTATTCTTACTCCTGGTTCTGGTTCTGGTTTTTGCTATAAACCCTCCGAG
GATATTATGATGTACATAGGATAACAGAGAAGAGGAGGGGGAGTTTGTTT
CCACCTAATAGTATAAGAACGCTTG
back to top

Coding sequence (CDS) from alignment at ch4:4622838..4624462-

>KJC3_006083-T1 ID=KJC3_006083-T1|Name=KJC3_006083-T1|organism=Aspergillus niger KJC3|type=CDS|length=1266bp|location=Sequence derived from alignment at ch4:4622838..4624462- (Aspergillus niger KJC3)
GCGCCTTTCTTTTCCTCCTCATCCTCGCCGCCTACATCGGCCTCCTCCCG
CACAGCACATCATCTACTCTTCCGTCCCAACTTCAACCCAATGACAAGTT
CCTCCATGTCGTCACCTTCTTCCTCCTCTCCCTCATATTCTACTGGATCT
TCGACACTACCCGTCGTCGCACCCTTCACCTAACCCTCGTCGTCTGCACT
CTCGTCCTCGGCATTGGCTCCGAAATCGTCCAAGGTCTCCTTCCCAACGG
CAGGTCCTTCGATGCGTTCGACCTCCTCGCCAACATCGTCGGCAGTCTCG
GCGCCGTCGGCCTTTGCGGTTGGTACCACCGGCGCATGCTTGACCGGCGA
CGCAAGGCGCGCTTCGGTTCCCTGGGCGGCGACGGCACAGAGAACGATGT
CGAGCTCGGAGTGACGGGCCACCACAGCGACGAGGAGGAGGGTCTGGGAC
CCCAGGAAACAGGCGTTATGAGCCTAGAGCAGGAGGTAGATAACTGGGAT
GAGAACGCTGTCGATAATTGGGATGAGGAGGACGAGTCTGGAGATTTGGC
CGTTGATACCTCGAAGAGGACGTCGCCGGCTGAAGATGGAAAGAAGCGGA
GTGATTAAATGCGAATCCGTTACCCTTTCGCGGGCGCCTTTCTTTTCCTC
CTCATCCTCGCCGCCTACATCGGCCTCCTCCCGCACAGCACATCATCTAC
TCTTCCGTCCCAACTTCAACCCAATGACAAGTTCCTCCATGTCGTCACCT
TCTTCCTCCTCTCCCTCATATTCTACTGGATCTTCGACACTACCCGTCGT
CGCACCCTTCACCTAACCCTCGTCGTCTGCACTCTCGTCCTCGGCATTGG
CTCCGAAATCGTCCAAGGTCTCCTTCCCAACGGCAGGTCCTTCGATGCGT
TCGACCTCCTCGCCAACATCGTCGGCAGTCTCGGCGCCGTCGGCCTTTGC
GGTTGGTACCACCGGCGCATGCTTGACCGGCGACGCAAGGCGCGCTTCGG
TTCCCTGGGCGGCGACGGCACAGAGAACGATGTCGAGCTCGGAGTGACGG
GCCACCACAGCGACGAGGAGGAGGGTCTGGGACCCCAGGAAACAGGCGTT
ATGAGCCTAGAGCAGGAGGTAGATAACTGGGATGAGAACGCTGTCGATAA
TTGGGATGAGGAGGACGAGTCTGGAGATTTGGCCGTTGATACCTCGAAGA
GGACGTCGCCGGCTGAAGATGGAAAGAAGCGGAGTGATTAAATGCGAATC
CGTTACCCTTTCGCGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006083KJC3_006083Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006083-T1KJC3_006083-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006083-T1.cdsKJC3_006083-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006083-T1.utr3p1KJC3_006083-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006083-T1.exon2KJC3_006083-T1.exon2Aspergillus niger KJC3exon
KJC3_006083-T1.exon1KJC3_006083-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006083-T1.utr5p1KJC3_006083-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4622838..4624462 -
Powered by Drupal