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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4655090..4657969+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006092-T1 ID=KJC3_006092-T1|Name=KJC3_006092-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2880bp|location=Sequence derived from alignment at ch4:4655090..4657969+ (Aspergillus niger KJC3)
AGATCGATAGTTAGTAGGTAGTGGTAGTAAGTAGACCATGGCTCTCGCGG
GCAGAATTGAACAGTGAGATCATTGCCGCAACCTTACTTTTGTGCGACCT
GGGACACACCTGTCACCATGTTTGCAGTATGCATAAAACTCCTCCATTGA
ATGATGGTATTGAGACCAAGAATCTGTTGGATTATACTGTAGAAGAGGTC
AAGTCTCTTCAGTCTGGACTCGCCGTTCATCTGTTGAATTGAACTCCCCT
TTGTATCGCCACCACTACAAAGTACTATCCACTAGATAAAGCACGAGGAC
TGAAAAGTGCATTATGGCTGGAGGTTTCCTCCCATATCACGAACCAGGCA
GTACGTTGACGATGCCTTCACCACTGCCATTATCATTAAAAACTGACCAC
ATCAGTTGTCAACATTCTCATCCTAATCTCCTTCTTTTTCTTCCTCTCAC
TAGCGGAATGGATCTCCTCCAAAATCATCCGCGCCGGCATCATTGGCCAG
ATCGCCGTCGGTATCATCTACGGAACGCCACTGGCAAACATCCTGCATGC
AGACTGGCAATCCACTTTCCTTGCTCTAGGTTATATCGGCTTAATACTCA
TCATCTTTGAAGGCGGGCTAGGAGCCCGTCTTGACCTCCTGAAGAAGAAT
TTCTTCTTGAGTATGATTGGCGCTGCAACAGGGGTTCTATTTCCGATCGG
ACTTTCTTACCTGCTCTTGTACTTGGGATTCGGTTATGGTGAGTATGCGT
TACTCGATTAGGACTCTCAAAAGTGACACATCCCGGCAGGTGCTGTTGAA
ACCTTCATCGTGGGAGCATCTTTGTCTGCTACTTCTCTCGGCACTACCTT
TGCTGTTATTTCAACCGCTTCCAGCACGGTCGATCTCGCCCAAACTCGCG
TCGGATCGATCCTCGTAAGCGCAGCTGTCATTGACGACGTTGTCGGTCTG
GTAATGCTAAGGTAGATGACATACTTGCCTGAAACCCACCTTCATCACGG
TTTAACTCATTTGATACAGCGTCATCAATGATCTGGGCGAACTAGGCCAA
GGCCACTCTGTCAATCTAGGCTGGCTAATTGGCCGCCCGATTGTAGCCTC
CATCGGCATGGCTATTGTAACCCCTCTGGTAACAAAATTCCTCTTTGCGC
CGCTCTTCCGCCGCTATATCGAGTATCACTTCGCTCGATTCGACCACATC
TCCAACATCATCCTGATGATCTTGGTCCTCTGCGCATTTATCAGCATTGC
CGCGTATACGGGGACTTCCATCCTCTTTGGTGCGTTCCTGGCTGGTACAT
TCCTGACTTATATTCCCAGTAAGCACCCAGATGGACCGTTTGTAGTCATG
AGCCGAGAGGAAGGCGAAAGAGAGGAGAATAAGAGTCCGACATTTGTACA
CACTTTCGAGCGGTACCTGCTGGATGTGCAGAAGTATCTTATGGAGCCTC
TCTTCTTTTCGAGTATCGGGTTCGCTATCCCCTTTGTGCAGCTTTGGACA
GGGAAGAGGATATGGAGGGGTATTGTCTTTACTCTTCTGATGCTTTTTGC
AAAGGTATTCACTTTCCACTCTCGCTAATTTTGTCTCTAACATGACAACT
AACAATGAACCAGCTCATCGTTGGAATCTGGGTCCCACTTTGGCAATTAC
TATCCGGTTCCAACATCCTGAGCAGAAAAGTAGCAAAAGAGTATCCTAGG
GAAGAATATCACAGCGACGAGAGCACAAAACCAGTCTGGTCTACAGTCTG
TCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGGCGAGATCG
GCCTCCTCATTGTCGAGGTCGGGTACAATGAGACTTCATACGTGAGTGAG
GACGCCTTTATTACCGCCGTATGGGCGATTCTGCTTAACACGGTCCTTGG
TCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGAGATAGGGG
AGGGGGCATGGGGGCTTCAGGGGACTGCTCCTGCTGCTGGTGACGATTCA
AGTATTGATCCCTCACTTGGGTGATATGCAGGACACCACTGTCTCATCAT
GTTATCTACATGGTTTCACTACAAGCCATTGCCTTACTAATGACCTTGAA
TCTTTTCCCAAGACTCATGATGACATGTGTCAGAACACCAGGCATTCCCC
AGCGTACGCATTGAACCATTCATGCTCAATCTGGACCAAACCCTCCTCAC
CAGGTGGCCTACTTCCAGTTCCAGCTCAGCCAGCTATCTACTTGCCAGAT
TGTCGGCTGCTGCTATCCAGTTCCTATCTCAGCGACAAGTACCAAGTCAA
CTCTACAGGCAGATTTGTGGCAGATGAGGCTCAGGGTCAACAAACACAAT
GGCCAATAAGGGCAATAACTTGAACTCAGATAAATTTCGTGTCGAAGGAT
ATCTTGGCTTCCCTTTACGCCGTGGCATTTTCAATCTCTTGAGGCAGCAT
TGAAAAGTGACTGTTTGGCACAAAGCACCGTCCAAGCCCGGAATACCACA
CTAGCCTAGCCTCTTGCAGGGATGAAATCCCCGAACCCGGCAGGCACATC
CTTCTACCCCACTTCTCTTCATACAGCGATTTTCCTGCTTCGAGTTAGGG
CTGAGTTGCATGAATTCGGCACTAGATGAATTTCCTGACAACGGAACCAC
TCTTGACCCTGTCTCTCGTCCTGTTTTCTTTGGTTTGATCTATGCAGGAT
GTTTGCAATCATTACACTTGGTTCGGATCATTGCTTCTATGGGGGTTATA
TTGCTGGTGTTATGCCTAGGGGTTGGATGATGGGCATCTTTGGATACCGA
GATCAAATGCCTTTCGTCAAGGATACAACGCAATATGATTTGTTAGATTT
GTTTTTGTTTTAAGATAAACAGGTTCTCGC back to topCoding sequence (CDS) from alignment at ch4:4655090..4657969+ >KJC3_006092-T1 ID=KJC3_006092-T1|Name=KJC3_006092-T1|organism=Aspergillus niger KJC3|type=CDS|length=4776bp|location=Sequence derived from alignment at ch4:4655090..4657969+ (Aspergillus niger KJC3)
ATGATTGGCGCTGCAACAGGGGTTCTATTTCCGATCGGACTTTCTTACCT
GCTCTTGTACTTGGGATTCGGTTATGGTGCTGTTGAAACCTTCATCGTGG
GAGCATCTTTGTCTGCTACTTCTCTCGGCACTACCTTTGCTGTTATTTCA
ACCGCTTCCAGCACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCT
CGTAAGCGCAGCTGTCATTGACGACGTTGTCGGTCTGGTAATGCTAAGCG
TCATCAATGATCTGGGCGAACTAGGCCAAGGCCACTCTGTCAATCTAGGC
TGGCTAATTGGCCGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAAC
CCCTCTGGTAACAAAATTCCTCTTTGCGCCGCTCTTCCGCCGCTATATCG
AGTATCACTTCGCTCGATTCGACCACATCTCCAACATCATCCTGATGATC
TTGGTCCTCTGCGCATTTATCAGCATTGCCGCGTATACGGGGACTTCCAT
CCTCTTTGGTGCGTTCCTGGCTGGTACATTCCTGACTTATATTCCCAGTA
AGCACCCAGATGGACCGTTTGTAGTCATGAGCCGAGAGGAAGGCGAAAGA
GAGGAGAATAAGAGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCT
GGATGTGCAGAAGTATCTTATGGAGCCTCTCTTCTTTTCGAGTATCGGGT
TCGCTATCCCCTTTGTGCAGCTTTGGACAGGGAAGAGGATATGGAGGGGT
ATTGTCTTTACTCTTCTGATGCTTTTTGCAAAGCTCATCGTTGGAATCTG
GGTCCCACTTTGGCAATTACTATCCGGTTCCAACATCCTGAGCAGAAAAG
TAGCAAAAGAGTATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAA
CCAGTCTGGTCTACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAAT
GGTTGCCCGCGGCGAGATCGGCCTCCTCATTGTCGAGGTCGGGTACAATG
AGACTTCATACGTGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATT
CTGCTTAACACGGTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTT
TCATGGAAAGGAGATAGGGGAGGGGGCATGGGGGCTTCAGGGGACTGCTC
CTGCTGCTGGTGACGATTCAAGTATTGATCCCTCACTTGGGTGAATGATT
GGCGCTGCAACAGGGGTTCTATTTCCGATCGGACTTTCTTACCTGCTCTT
GTACTTGGGATTCGGTTATGGTGCTGTTGAAACCTTCATCGTGGGAGCAT
CTTTGTCTGCTACTTCTCTCGGCACTACCTTTGCTGTTATTTCAACCGCT
TCCAGCACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCTCGTAAG
CGCAGCTGTCATTGACGACGTTGTCGGTCTGGTAATGCTAAGCGTCATCA
ATGATCTGGGCGAACTAGGCCAAGGCCACTCTGTCAATCTAGGCTGGCTA
ATTGGCCGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCT
GGTAACAAAATTCCTCTTTGCGCCGCTCTTCCGCCGCTATATCGAGTATC
ACTTCGCTCGATTCGACCACATCTCCAACATCATCCTGATGATCTTGGTC
CTCTGCGCATTTATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTT
TGGTGCGTTCCTGGCTGGTACATTCCTGACTTATATTCCCAGTAAGCACC
CAGATGGACCGTTTGTAGTCATGAGCCGAGAGGAAGGCGAAAGAGAGGAG
AATAAGAGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGT
GCAGAAGTATCTTATGGAGCCTCTCTTCTTTTCGAGTATCGGGTTCGCTA
TCCCCTTTGTGCAGCTTTGGACAGGGAAGAGGATATGGAGGGGTATTGTC
TTTACTCTTCTGATGCTTTTTGCAAAGCTCATCGTTGGAATCTGGGTCCC
ACTTTGGCAATTACTATCCGGTTCCAACATCCTGAGCAGAAAAGTAGCAA
AAGAGTATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTC
TGGTCTACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGC
CCGCGGCGAGATCGGCCTCCTCATTGTCGAGGTCGGGTACAATGAGACTT
CATACGTGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTT
AACACGGTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGG
AAAGGAGATAGGGGAGGGGGCATGGGGGCTTCAGGGGACTGCTCCTGCTG
CTGGTGACGATTCAAGTATTGATCCCTCACTTGGGTGAATGATTGGCGCT
GCAACAGGGGTTCTATTTCCGATCGGACTTTCTTACCTGCTCTTGTACTT
GGGATTCGGTTATGGTGCTGTTGAAACCTTCATCGTGGGAGCATCTTTGT
CTGCTACTTCTCTCGGCACTACCTTTGCTGTTATTTCAACCGCTTCCAGC
ACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCTCGTAAGCGCAGC
TGTCATTGACGACGTTGTCGGTCTGGTAATGCTAAGCGTCATCAATGATC
TGGGCGAACTAGGCCAAGGCCACTCTGTCAATCTAGGCTGGCTAATTGGC
CGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCTGGTAAC
AAAATTCCTCTTTGCGCCGCTCTTCCGCCGCTATATCGAGTATCACTTCG
CTCGATTCGACCACATCTCCAACATCATCCTGATGATCTTGGTCCTCTGC
GCATTTATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTTTGGTGC
GTTCCTGGCTGGTACATTCCTGACTTATATTCCCAGTAAGCACCCAGATG
GACCGTTTGTAGTCATGAGCCGAGAGGAAGGCGAAAGAGAGGAGAATAAG
AGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGTGCAGAA
GTATCTTATGGAGCCTCTCTTCTTTTCGAGTATCGGGTTCGCTATCCCCT
TTGTGCAGCTTTGGACAGGGAAGAGGATATGGAGGGGTATTGTCTTTACT
CTTCTGATGCTTTTTGCAAAGCTCATCGTTGGAATCTGGGTCCCACTTTG
GCAATTACTATCCGGTTCCAACATCCTGAGCAGAAAAGTAGCAAAAGAGT
ATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTCTGGTCT
ACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGG
CGAGATCGGCCTCCTCATTGTCGAGGTCGGGTACAATGAGACTTCATACG
TGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTTAACACG
GTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGA
GATAGGGGAGGGGGCATGGGGGCTTCAGGGGACTGCTCCTGCTGCTGGTG
ACGATTCAAGTATTGATCCCTCACTTGGGTGAATGATTGGCGCTGCAACA
GGGGTTCTATTTCCGATCGGACTTTCTTACCTGCTCTTGTACTTGGGATT
CGGTTATGGTGCTGTTGAAACCTTCATCGTGGGAGCATCTTTGTCTGCTA
CTTCTCTCGGCACTACCTTTGCTGTTATTTCAACCGCTTCCAGCACGGTC
GATCTCGCCCAAACTCGCGTCGGATCGATCCTCGTAAGCGCAGCTGTCAT
TGACGACGTTGTCGGTCTGGTAATGCTAAGCGTCATCAATGATCTGGGCG
AACTAGGCCAAGGCCACTCTGTCAATCTAGGCTGGCTAATTGGCCGCCCG
ATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCTGGTAACAAAATT
CCTCTTTGCGCCGCTCTTCCGCCGCTATATCGAGTATCACTTCGCTCGAT
TCGACCACATCTCCAACATCATCCTGATGATCTTGGTCCTCTGCGCATTT
ATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTTTGGTGCGTTCCT
GGCTGGTACATTCCTGACTTATATTCCCAGTAAGCACCCAGATGGACCGT
TTGTAGTCATGAGCCGAGAGGAAGGCGAAAGAGAGGAGAATAAGAGTCCG
ACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGTGCAGAAGTATCT
TATGGAGCCTCTCTTCTTTTCGAGTATCGGGTTCGCTATCCCCTTTGTGC
AGCTTTGGACAGGGAAGAGGATATGGAGGGGTATTGTCTTTACTCTTCTG
ATGCTTTTTGCAAAGCTCATCGTTGGAATCTGGGTCCCACTTTGGCAATT
ACTATCCGGTTCCAACATCCTGAGCAGAAAAGTAGCAAAAGAGTATCCTA
GGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTCTGGTCTACAGTC
TGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGGCGAGAT
CGGCCTCCTCATTGTCGAGGTCGGGTACAATGAGACTTCATACGTGAGTG
AGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTTAACACGGTCCTT
GGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGAGATAGG
GGAGGGGGCATGGGGGCTTCAGGGGACTGCTCCTGCTGCTGGTGACGATT
CAAGTATTGATCCCTCACTTGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015299 | solute:proton antiporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006812 | cation transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006092-T1.utr5p1 | KJC3_006092-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006092-T1.utr3p1 | KJC3_006092-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006153 |
| DBxref | PFAM:PF00999 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4655090..4657969 + |
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