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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4665320..4667244- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006097-T1 ID=KJC3_006097-T1|Name=KJC3_006097-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1925bp|location=Sequence derived from alignment at ch4:4665320..4667244- (Aspergillus niger KJC3)
ATGCCCATCTTTGAATATTCTCCTCTGGATCAAGGGCCTTTCAGCACCCG
CATACTCCGTCTGCTTCCAAGCAAAGACAGAGCCGCTCCGATTGAATGTC
AGCTTTCCAACCTTTCCCTTCGGGACGATATTGCCCAAGAGTACGATGCC
CTCTCATACGTGTGGGGAGATGAGGCGGACGGACAGTGTAACATCTCAAT
CAACAACCAGGCTCTCTCTGTAGGAAAGAATTTACACTCCGCACTCCTTA
GGCTTCGAGGCCATAGAGTTGAACGGACATTATGGGTCGACGCAATTTGC
ATCGACCAGAACAATGTGGGAGAAAAAGAGAAGCAGATCCAAAACATGGC
GCGCATATATGAGCAGGCCAGCCAGGTGATAGTGTGGTTGGGTGAGGAGG
CGGATGATAGTACTCAGGCGTTAGAAGCCATTCGTGTCGCGGCAGAGTCA
GTGTATTCTGGAGAGGATTCCAATCCGCCATCAGGAAGCGTCCCCATTGA
GGGTATTAAAAGTCTGTTCCTGCGGGGGTGGTTTTATCGCATGTGGGTAA
GTAATTTTACACTATGCCCACCGTCTTCTCCCTCCTCTTGCTCTTCACGA
AGCGATATCCGATGTCTAAGGAGAGGTAGCAGATCCTCCAAGAGGTGGGC
CTCGCTCGGAATATTCAGATTCTGTGTGGTCCTGTCAGAATGAGCGGTTA
CACATTTGCCACGGGTATCGAAGCATATCGCTCGTATGCTGGCCCTAGTG
TGATGAGCACGACACATCTGATTCGTGAAGCAATCTTTCGTCCACAGTAT
GGTACGCACCCAATGAAGAAGCTCACCCTATCTGAATTGATTGATATGCA
TCATACAAACGAGGCCTCTATTCTGCATGATAAAATCTATGCTCTACTGG
GACTGAGCTCTGATTCTCATGAAGCACCTGGACTGTTACCCAACTATGAG
CTGTCCTGGGAGCAGCTTTTTCAACGATTAATATGGTTCCTTCTAAATAA
ACAGATATCAGTGAAGACCTGGCCTGGTACGGAATTTGCGAGCATACAGA
GTAGTGGAAGGATCTTGGGTTTCGTTGTCACCACGGAAGACAAGCACACG
AAGACCATATTGCAAGTGCTTTTGACTGGTGTTGGGCTGCGTGATGAGGG
CTACAAGAGATTGTGGAAAGTAAAATGGACCATCAGGAAATCAGTGGGGT
TGATCAAGTCCGGTGATATCATATGCCTCCTGAAGGGGGTTTCCTATCCA
TCCGTCATCAGATACGCTGATGGTTGTTTTCGAGTGATCGTGCTAAGGGC
CGTTCTCCAGAAGATGAACGGGGAAGACAGTGCAGATTTCCAACAAGTAC
TGTCCGAGAACAATCGACCGGCTCTGAACTTTCACCTTGTCTGGAGCTGG
AGAGAGCAATTGTCACCTTCCTTAGGTGTACTCGACTTGGCAGCAGAGGC
TCTTGGAACGAAGTCGACAATAGAGAAGGTTCTATGGGACACCAATGTTG
CAATGCACGAGACAGCATACAACAGAAAAGGGATGTACTGGCCAGCCATG
TTAGCTACCGAAGACATCTTTCGGTTATTTACAGAGCGACTCGGATCTTG
GCATCCAAAGACACGGATGACCTTGTACAGCGTGGCGCTCTTGTATTCCA
AGGCGAATATTGGCGACAAGGCAATCCCACTACTCTTCGATCGAACTAAG
GCAAGAGATATATTGCGGCGGATGTGTGGACTACAATATGGAGAGAATTT
ATCGTCGTTGGTGGGACGTAACTACTTTCACCGGAAATACATCGATGAAC
CGGATTTTGTTTCTGGGAATATGGAGATACCTATAAGCATAAGGCTCGAA
GCATTGAGTAAATTGAAGGACCTGCTGCGTGAATTTGAGCACAGACCCCC
TTTAAGGCTCCAGCCGTTATTTTGA back to topCoding sequence (CDS) from alignment at ch4:4665320..4667244- >KJC3_006097-T1 ID=KJC3_006097-T1|Name=KJC3_006097-T1|organism=Aspergillus niger KJC3|type=CDS|length=3678bp|location=Sequence derived from alignment at ch4:4665320..4667244- (Aspergillus niger KJC3)
ATCCTCCAAGAGGTGGGCCTCGCTCGGAATATTCAGATTCTGTGTGGTCC
TGTCAGAATGAGCGGTTACACATTTGCCACGGGTATCGAAGCATATCGCT
CGTATGCTGGCCCTAGTGTGATGAGCACGACACATCTGATTCGTGAAGCA
ATCTTTCGTCCACAGTATGGTACGCACCCAATGAAGAAGCTCACCCTATC
TGAATTGATTGATATGCATCATACAAACGAGGCCTCTATTCTGCATGATA
AAATCTATGCTCTACTGGGACTGAGCTCTGATTCTCATGAAGCACCTGGA
CTGTTACCCAACTATGAGCTGTCCTGGGAGCAGCTTTTTCAACGATTAAT
ATGGTTCCTTCTAAATAAACAGATATCAGTGAAGACCTGGCCTGGTACGG
AATTTGCGAGCATACAGAGTAGTGGAAGGATCTTGGGTTTCGTTGTCACC
ACGGAAGACAAGCACACGAAGACCATATTGCAAGTGCTTTTGACTGGTGT
TGGGCTGCGTGATGAGGGCTACAAGAGATTGTGGAAAGTAAAATGGACCA
TCAGGAAATCAGTGGGGTTGATCAAGTCCGGTGATATCATATGCCTCCTG
AAGGGGGTTTCCTATCCATCCGTCATCAGATACGCTGATGGTTGTTTTCG
AGTGATCGTGCTAAGGGCCGTTCTCCAGAAGATGAACGGGGAAGACAGTG
CAGATTTCCAACAAGTACTGTCCGAGAACAATCGACCGGCTCTGAACTTT
CACCTTGTCTGGAGCTGGAGAGAGCAATTGTCACCTTCCTTAGGTGTACT
CGACTTGGCAGCAGAGGCTCTTGGAACGAAGTCGACAATAGAGAAGGTTC
TATGGGACACCAATGTTGCAATGCACGAGACAGCATACAACAGAAAAGGG
ATGTACTGGCCAGCCATGTTAGCTACCGAAGACATCTTTCGGTTATTTAC
AGAGCGACTCGGATCTTGGCATCCAAAGACACGGATGACCTTGTACAGCG
TGGCGCTCTTGTATTCCAAGGCGAATATTGGCGACAAGGCAATCCCACTA
CTCTTCGATCGAACTAAGGCAAGAGATATATTGCGGCGGATGTGTGGACT
ACAATATGGAGAGAATTTATCGTCGTTGGTGGGACGTAACTACTTTCACC
GGAAATACATCGATGAACCGGATTTTGTTTCTGGGAATATGGAGATACCT
ATAAGCATAAGGCTCGAAGCATTGAGTAAATTGAAGGACCTGCTGCGTGA
ATTTGAGCACAGACCCCCTTTAAGGCTCCAGCCGTTATTTTGAATGCCCA
TCTTTGAATATTCTCCTCTGGATCAAGGGCCTTTCAGCACCCGCATACTC
CGTCTGCTTCCAAGCAAAGACAGAGCCGCTCCGATTGAATGTCAGCTTTC
CAACCTTTCCCTTCGGGACGATATTGCCCAAGAGTACGATGCCCTCTCAT
ACGTGTGGGGAGATGAGGCGGACGGACAGTGTAACATCTCAATCAACAAC
CAGGCTCTCTCTGTAGGAAAGAATTTACACTCCGCACTCCTTAGGCTTCG
AGGCCATAGAGTTGAACGGACATTATGGGTCGACGCAATTTGCATCGACC
AGAACAATGTGGGAGAAAAAGAGAAGCAGATCCAAAACATGGCGCGCATA
TATGAGCAGGCCAGCCAGGTGATAGTGTGGTTGGGTGAGGAGGCGGATGA
TAGTACTCAGGCGTTAGAAGCCATTCGTGTCGCGGCAGAGTCAGTGTATT
CTGGAGAGGATTCCAATCCGCCATCAGGAAGCGTCCCCATTGAGGGTATT
AAAAGTCTGTTCCTGCGGGGGTGGTTTTATCGCATGTGGATCCTCCAAGA
GGTGGGCCTCGCTCGGAATATTCAGATTCTGTGTGGTCCTGTCAGAATGA
GCGGTTACACATTTGCCACGGGTATCGAAGCATATCGCTCGTATGCTGGC
CCTAGTGTGATGAGCACGACACATCTGATTCGTGAAGCAATCTTTCGTCC
ACAGTATGGTACGCACCCAATGAAGAAGCTCACCCTATCTGAATTGATTG
ATATGCATCATACAAACGAGGCCTCTATTCTGCATGATAAAATCTATGCT
CTACTGGGACTGAGCTCTGATTCTCATGAAGCACCTGGACTGTTACCCAA
CTATGAGCTGTCCTGGGAGCAGCTTTTTCAACGATTAATATGGTTCCTTC
TAAATAAACAGATATCAGTGAAGACCTGGCCTGGTACGGAATTTGCGAGC
ATACAGAGTAGTGGAAGGATCTTGGGTTTCGTTGTCACCACGGAAGACAA
GCACACGAAGACCATATTGCAAGTGCTTTTGACTGGTGTTGGGCTGCGTG
ATGAGGGCTACAAGAGATTGTGGAAAGTAAAATGGACCATCAGGAAATCA
GTGGGGTTGATCAAGTCCGGTGATATCATATGCCTCCTGAAGGGGGTTTC
CTATCCATCCGTCATCAGATACGCTGATGGTTGTTTTCGAGTGATCGTGC
TAAGGGCCGTTCTCCAGAAGATGAACGGGGAAGACAGTGCAGATTTCCAA
CAAGTACTGTCCGAGAACAATCGACCGGCTCTGAACTTTCACCTTGTCTG
GAGCTGGAGAGAGCAATTGTCACCTTCCTTAGGTGTACTCGACTTGGCAG
CAGAGGCTCTTGGAACGAAGTCGACAATAGAGAAGGTTCTATGGGACACC
AATGTTGCAATGCACGAGACAGCATACAACAGAAAAGGGATGTACTGGCC
AGCCATGTTAGCTACCGAAGACATCTTTCGGTTATTTACAGAGCGACTCG
GATCTTGGCATCCAAAGACACGGATGACCTTGTACAGCGTGGCGCTCTTG
TATTCCAAGGCGAATATTGGCGACAAGGCAATCCCACTACTCTTCGATCG
AACTAAGGCAAGAGATATATTGCGGCGGATGTGTGGACTACAATATGGAG
AGAATTTATCGTCGTTGGTGGGACGTAACTACTTTCACCGGAAATACATC
GATGAACCGGATTTTGTTTCTGGGAATATGGAGATACCTATAAGCATAAG
GCTCGAAGCATTGAGTAAATTGAAGGACCTGCTGCGTGAATTTGAGCACA
GACCCCCTTTAAGGCTCCAGCCGTTATTTTGAATGCCCATCTTTGAATAT
TCTCCTCTGGATCAAGGGCCTTTCAGCACCCGCATACTCCGTCTGCTTCC
AAGCAAAGACAGAGCCGCTCCGATTGAATGTCAGCTTTCCAACCTTTCCC
TTCGGGACGATATTGCCCAAGAGTACGATGCCCTCTCATACGTGTGGGGA
GATGAGGCGGACGGACAGTGTAACATCTCAATCAACAACCAGGCTCTCTC
TGTAGGAAAGAATTTACACTCCGCACTCCTTAGGCTTCGAGGCCATAGAG
TTGAACGGACATTATGGGTCGACGCAATTTGCATCGACCAGAACAATGTG
GGAGAAAAAGAGAAGCAGATCCAAAACATGGCGCGCATATATGAGCAGGC
CAGCCAGGTGATAGTGTGGTTGGGTGAGGAGGCGGATGATAGTACTCAGG
CGTTAGAAGCCATTCGTGTCGCGGCAGAGTCAGTGTATTCTGGAGAGGAT
TCCAATCCGCCATCAGGAAGCGTCCCCATTGAGGGTATTAAAAGTCTGTT
CCTGCGGGGGTGGTTTTATCGCATGTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4665320..4667244 - |
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