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KJC3_006103-T1, KJC3_006103-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006103-T1
Unique NameKJC3_006103-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4693275..4695137+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006103-T1 ID=KJC3_006103-T1|Name=KJC3_006103-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1863bp|location=Sequence derived from alignment at ch4:4693275..4695137+ (Aspergillus niger KJC3)
CCCTCCGCCTCACTGCGTATCTACCTAGGCCGTAGCATCTCTCTCTCTCC
CTCTCTCTCGCCGTCATTGCGCTCTCTCTCCATCACCTTTTCCCGTCCAC
CGCCATTTCACTCTGGTACCGGTGCGTAGTATACCTCCTTCTCATTTGTC
CATTTTCCCCCTCCAATGTTCCCTCCGTCACATTACCCCTGCTCGATTCT
GGCCCTTTCCTCCCGCCCCCCCTCCTCATCCGGACTCCCTCGTGTGTCTT
GCTTACGTCTTCCTTCAGGCTACTACTCCCGAGCAGTGCTCTCTGTATCC
GCTCGGCCTGAGCCGCCCTTCGCGAGCTGAAATCATCCTCCAGATTGATA
ATCATTCCTAGTGTGGGCTTGTCCTGCAAGACGACCTGATCGCATACCAT
CATCGCCTTCGTTGGGCTCTCGAGCCATGTCTGAATCAACCAGCACAAAT
ACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTTTGGGTGAAGCCGC
TGTGGGAAAGGTACGACCAACCTCGGCACTTTCCTTGCTTTGACCTCCGC
GTGGTACCTGAGTAACCAAAGAAGAAAGAAGACTGACAATGAACGCAATG
GATGATTGCCCATTATAGTCCTCCCTGGTGCTGAGATTTGTCAACAACGA
TTTCCAAGAAAACAAAGAACCAACTATTGGAGGTAAGCTTTTCCGATTTT
GGCAGTTACAGATCACTTTCTCTGGATTGGGAAGAGAGAGAGGGAAAGGA
AGAAGAAGAAGGGAAATTGTTCCCGGTTTTCTTGGTTTCCGAAAGTGGCC
GTATCTCCGATGCTGATGTCATTGCCTCTATAATAGCTGCATTTCTTACC
CAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATAC
CGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAACG
CCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCACA
AAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCAT
TGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAACG
AGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGCC
GATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTTC
CGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAGG
AAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGTC
GTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGAA
GAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGCG
GTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGCA
ACTGCAAAGGAAGGGTGTGCCTGCTAATCTCGGATTTTTTTTTTGCAGCG
TGTCATGGGCTTCTGGTCGTGCTTCTTTCGTTTTTGCAATCCCCTTTTTA
CTGTTCAGATACAATGTCAGGTTGATTACACGGTAATGTCCTGCGGCAGT
GATTCCCCGACCGTCAGGACCAGACTGACATGCAGCTTGAGCCATTCTCA
TTTCCCGGCGTCTTGAGTGTTCTGTTCTGCTATGACATTGCATTACCTGT
TTATCTTTTTCTGTTTGTTTCCGATGACTATGCAGAGTTAGTATGGCGAT
TAAGGGAATGGCAAAGATTTGTACAGAGAACCAGTCAGGTTCATTGCCAG
TCAGCCATAATCATAGAATAAGAATTCTGCGATACAGATGCAGTATATTG
TTCTATATGATAA
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Coding sequence (CDS) from alignment at ch4:4693275..4695137+

>KJC3_006103-T1 ID=KJC3_006103-T1|Name=KJC3_006103-T1|organism=Aspergillus niger KJC3|type=CDS|length=2367bp|location=Sequence derived from alignment at ch4:4693275..4695137+ (Aspergillus niger KJC3)
ATGTCTGAATCAACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAA
GCTGGTACTTTTGGGTGAAGCCGCTGTGGGAAAGTCCTCCCTGGTGCTGA
GATTTGTCAACAACGATTTCCAAGAAAACAAAGAACCAACTATTGGAGCT
GCATTTCTTACCCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGA
AATTTGGGATACCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGT
ACTACCGTAACGCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCG
TCCTCTCTCACAAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGC
TAGTCCCGGCATTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAA
ACGACGGGAACGAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAA
TCGTCTACGGCCGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACA
GGATGTCACTTCCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCG
CCTACGCAGAGGAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACG
GGCACGAATGTCGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGA
GAGCAGCCTGAAGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTA
GCCTGAACAGCGGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAG
CGCGGCCCGGCAACTGCAAAGGAAGGGTGTGCCTGCTAAATGTCTGAATC
AACCAGCACAAATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTT
TGGGTGAAGCCGCTGTGGGAAAGTCCTCCCTGGTGCTGAGATTTGTCAAC
AACGATTTCCAAGAAAACAAAGAACCAACTATTGGAGCTGCATTTCTTAC
CCAAAAATGTTCCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATA
CCGCCGGTCAGGAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAAC
GCCCAGGCGGCGCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCAC
AAAGGCTAAGCACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCA
TTGTGATTGCTCTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAAC
GAGGCGACCGGGGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGC
CGATGCAGATGAAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTT
CCGGCGATGCTCGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAG
GAAGAGGGTCTCCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGT
CGTGGATGTCTTTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGA
AGAGTGGACGAGCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGC
GGTCGTCCGGCTGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGC
AACTGCAAAGGAAGGGTGTGCCTGCTAAATGTCTGAATCAACCAGCACAA
ATACCCCCAAGCCGAGTAGCAGCGTCAAGCTGGTACTTTTGGGTGAAGCC
GCTGTGGGAAAGTCCTCCCTGGTGCTGAGATTTGTCAACAACGATTTCCA
AGAAAACAAAGAACCAACTATTGGAGCTGCATTTCTTACCCAAAAATGTT
CCCTGCCTACGCGAACGATCAAGTTCGAAATTTGGGATACCGCCGGTCAG
GAGCGCTTCGCTTCGCTCGCTCCCATGTACTACCGTAACGCCCAGGCGGC
GCTCGTGGTCTATGATGTTACCAAACCGTCCTCTCTCACAAAGGCTAAGC
ACTGGGTTGCGGAACTCCAGCGACAAGCTAGTCCCGGCATTGTGATTGCT
CTTGTTGGCAACAAGCTGGATTTGACAAACGACGGGAACGAGGCGACCGG
GGAGTCGCCCGCTGATGCCGAGGGCGAATCGTCTACGGCCGATGCAGATG
AAACCGCCGAAGAACCTCAGGAAGCACAGGATGTCACTTCCGGCGATGCT
CGGAAGGTGCCTACACGGGAAGCTAGCGCCTACGCAGAGGAAGAGGGTCT
CCTGTTCTTCGAGACTAGTGCCAAGACGGGCACGAATGTCGTGGATGTCT
TTACTGCGATTGCCAACGCGATCCCGGAGAGCAGCCTGAAGAGTGGACGA
GCAGGTGGCGCTGGCACGGGCCAGACTAGCCTGAACAGCGGTCGTCCGGC
TGAAGACTCGCGGGTCAACCTGGGGGAGCGCGGCCCGGCAACTGCAAAGG
AAGGGTGTGCCTGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006103KJC3_006103Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006103-T1KJC3_006103-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006103-T1.utr5p1KJC3_006103-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006103-T1.utr5p2KJC3_006103-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006103-T1.exon1KJC3_006103-T1.exon1Aspergillus niger KJC3exon
KJC3_006103-T1.exon2KJC3_006103-T1.exon2Aspergillus niger KJC3exon
KJC3_006103-T1.exon3KJC3_006103-T1.exon3Aspergillus niger KJC3exon
KJC3_006103-T1.exon4KJC3_006103-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006103-T1.cdsKJC3_006103-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006103-T1.utr3p1KJC3_006103-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4693275..4695137 +
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