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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4697508..4699903- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006105-T1 ID=KJC3_006105-T1|Name=KJC3_006105-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2396bp|location=Sequence derived from alignment at ch4:4697508..4699903- (Aspergillus niger KJC3)
CCTCCTGTCGCGGGGTTGTTCTCTCTACGATTTTTTATGTGTGATGGGTC
TTATGGGTATGTTGGAAGCAGATTTCAGTGAGATATCAGCTTGAATTGTG
TCCTGTATGGTTATATTTACTGGTGTTCTAGGTATGGTGCTTCCTGCTTC
CCCCCTGATGTTGTTTTCGGGCTCCCATACTGATTTATTGATGATGCGCC
CAGAATGCAATAAGCAATATCTTGACTGAATTTTTCAACATGTCACGCCC
CTTCCCTTACACCTTCATATCTTGTCCTTGCGCCAATATCCCCGTTCCTG
ACCCGGCGAAGAAACGGAGGTCCAGGGAGTCGCCGCAGAAATCCAACAAC
CCCGATCAACCCAAACCTCTCCTGCGCCCGGATGACGACGAAGATGAACA
GGCTTTCGATCCTCGGTCTCCGCGCGCCAATTTCTCTCTGTATCCCCCGG
AGCAGCTGCTTTACTGCGAGGATTGCCATCAGATCAAGTGCCCGCGATGC
ATAACCGAGGAGATTGTGTGCTGGTACTGTCCGAACTGCCTGTTCGAGAC
GCCCAGCAGTATGGTCCGGAGTGAGGGAAATCGGTAGGTTGAGCAGGATA
TACACGTCCTCAAGCCTTTACAAGTGTGTTCTAATGCGGTAAATGCTAGA
TGTGCTCGCAATTGCTTCAATTGCCCGATATGCACCGCCCCTCTGGGCGT
CAACACCCTCGAAAACGTCGTGACAGGCGGCACCAGCCAACAAGGCCCCT
GGGTGTTGTCCTGCGGATACTGCATGTGGTCGACGCTGGATATTGGCATC
AAGTTCGATAAACCGACCAACATTCGGACTCAATTGTCCAAGATGACCGA
AATCACTCCTGCTCGCTCGAGACAAATGTCCCGGACGTTCGGGGATCTCA
AATCTCCCCTCTCCACATACTCTTCTATCGACGAGCACTTCCCACCGCCA
GGAGAGAATAAGCCCGAAGACTCTCCTCTAGACCAGCCCAGCGCTCCTCT
CACCCCAGATGCCCGATTCCACGCACTCAAGAACTTCTACAAGAACCAAA
TCTCTGCGACATCCTCCTCCCCAACCGACCCCCTAGGCATGGACTTCGGC
TCCGGCTTCTCCTCCCCCGGTGCCCTAAACCGCATCATGTCTCTCTACAC
CTCCTCATCCCGCCTCAGCAGCCTCTACGGCGGAGCCAACAAAAAGCCCA
AAACCAAACCACCCGTCATGCGAGAAGCCCTCACAGCCAGCGAGGGGCTC
AAGATCCCCTCCCCAGACGCCGAAGACACGCTGATCCAACGCATGTCCTC
CCCGGACTGCGGATGGGACGGCCTCGCCTCCATCGAACAACGCGGCTTCC
AATCTCCTGATGCCCGGTTCGTAGAGGACCTCCTCCCGCTGCCCGTGTTA
CTTCGCACGAAGCGGTCCAAACGATGCAAGTCGTGCAAGCACATCCTTGT
CAAACCCGAACTGAAACCACAGTCCACGCGGTTCCGCATCCGCCTGATTG
CCTTCAGCTACATTCCCTTACCGACGTTACGGCCGCTGAATCCCAGTCCC
TCCCCAGCCACCACCACCACCACTACCACCGTTCTCCCGACGCCCTCAAG
TTCCACGACGAACCCGAACCTGGACGCTCTCTCCCCGCTCCGACCCATCC
AACTCCTCCTCACGCTGAAGAATCACATGTTCGATCCCGTCCGCGTCACA
CTCGCCACGCCATCCGTCACCCCGGGCCGCGTGGCCTCCAAAGTAACTAT
CCTCTGTCCGCAATTCGACATTGGCGCCAACAGCGATGTGTGGGACGAAG
CCCTCCAGGGTACTTCGGCTACCACTACTACCACTGCTGCCGCGGGCACA
GGAACTGACCCCCGCGGATCCCGATCCGGAGGGCTAGGCGTGTATGAGAA
AGTCGCCGAGGCCGGGAAAGTCTGGGACAAGGGACGGAACTGGACCACCG
TGGTGTTGGAAGTCGTACCAGGGACATTACCTGGTGGTGCGAAAGAACCC
TCCTCCTCTACCAACAAGACCAAGAAAGACAAGACGAAGAAGAAGAGCCC
TACCGATGACTTAGACGACCAAGATGAGAACTCTGACGATGACGAGTCCG
ACTCTGACCCGGGTTTCGACTGGAGCGGACAGACATCTGATCCCAACCAG
CAGTTACAGCCGGATGAAGATGTGCTGGAGATTCCGGTGTTTGTGCATAT
GGAGTGGGATTCGGATAATCAGATTGATAGTGAACAGGCGGTCGGAAGGG
CCGGGACGGGTGGGAGTGATACGGTTAAGAGGGAGTTGGCGTATTGGATG
GTGTTGGGGGTGGGGAGAATTGTGAGGGAGATTGTGTAGATAGATAGATG
GTTGTTTGGTTCCATTGGGTTGTATAGATGGTGATGGATGTTGGTG back to topCoding sequence (CDS) from alignment at ch4:4697508..4699903- >KJC3_006105-T1 ID=KJC3_006105-T1|Name=KJC3_006105-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch4:4697508..4699903- (Aspergillus niger KJC3)
ATGTGCTCGCAATTGCTTCAATTGCCCGATATGCACCGCCCCTCTGGGCG
TCAACACCCTCGAAAACGTCGTGACAGGCGGCACCAGCCAACAAGGCCCC
TGGGTGTTGTCCTGCGGATACTGCATGTGGTCGACGCTGGATATTGGCAT
CAAGTTCGATAAACCGACCAACATTCGGACTCAATTGTCCAAGATGACCG
AAATCACTCCTGCTCGCTCGAGACAAATGTCCCGGACGTTCGGGGATCTC
AAATCTCCCCTCTCCACATACTCTTCTATCGACGAGCACTTCCCACCGCC
AGGAGAGAATAAGCCCGAAGACTCTCCTCTAGACCAGCCCAGCGCTCCTC
TCACCCCAGATGCCCGATTCCACGCACTCAAGAACTTCTACAAGAACCAA
ATCTCTGCGACATCCTCCTCCCCAACCGACCCCCTAGGCATGGACTTCGG
CTCCGGCTTCTCCTCCCCCGGTGCCCTAAACCGCATCATGTCTCTCTACA
CCTCCTCATCCCGCCTCAGCAGCCTCTACGGCGGAGCCAACAAAAAGCCC
AAAACCAAACCACCCGTCATGCGAGAAGCCCTCACAGCCAGCGAGGGGCT
CAAGATCCCCTCCCCAGACGCCGAAGACACGCTGATCCAACGCATGTCCT
CCCCGGACTGCGGATGGGACGGCCTCGCCTCCATCGAACAACGCGGCTTC
CAATCTCCTGATGCCCGGTTCGTAGAGGACCTCCTCCCGCTGCCCGTGTT
ACTTCGCACGAAGCGGTCCAAACGATGCAAGTCGTGCAAGCACATCCTTG
TCAAACCCGAACTGAAACCACAGTCCACGCGGTTCCGCATCCGCCTGATT
GCCTTCAGCTACATTCCCTTACCGACGTTACGGCCGCTGAATCCCAGTCC
CTCCCCAGCCACCACCACCACCACTACCACCGTTCTCCCGACGCCCTCAA
GTTCCACGACGAACCCGAACCTGGACGCTCTCTCCCCGCTCCGACCCATC
CAACTCCTCCTCACGCTGAAGAATCACATGTTCGATCCCGTCCGCGTCAC
ACTCGCCACGCCATCCGTCACCCCGGGCCGCGTGGCCTCCAAAGTAACTA
TCCTCTGTCCGCAATTCGACATTGGCGCCAACAGCGATGTGTGGGACGAA
GCCCTCCAGGGTACTTCGGCTACCACTACTACCACTGCTGCCGCGGGCAC
AGGAACTGACCCCCGCGGATCCCGATCCGGAGGGCTAGGCGTGTATGAGA
AAGTCGCCGAGGCCGGGAAAGTCTGGGACAAGGGACGGAACTGGACCACC
GTGGTGTTGGAAGTCGTACCAGGGACATTACCTGGTGGTGCGAAAGAACC
CTCCTCCTCTACCAACAAGACCAAGAAAGACAAGACGAAGAAGAAGAGCC
CTACCGATGACTTAGACGACCAAGATGAGAACTCTGACGATGACGAGTCC
GACTCTGACCCGGGTTTCGACTGGAGCGGACAGACATCTGATCCCAACCA
GCAGTTACAGCCGGATGAAGATGTGCTGGAGATTCCGGTGTTTGTGCATA
TGGAGTGGGATTCGGATAATCAGATTGATAGTGAACAGGCGGTCGGAAGG
GCCGGGACGGGTGGGAGTGATACGGTTAAGAGGGAGTTGGCGTATTGGAT
GGTGTTGGGGGTGGGGAGAATTGTGAGGGAGATTGTGTAGATGTCACGCC
CCTTCCCTTACACCTTCATATCTTGTCCTTGCGCCAATATCCCCGTTCCT
GACCCGGCGAAGAAACGGAGGTCCAGGGAGTCGCCGCAGAAATCCAACAA
CCCCGATCAACCCAAACCTCTCCTGCGCCCGGATGACGACGAAGATGAAC
AGGCTTTCGATCCTCGGTCTCCGCGCGCCAATTTCTCTCTGTATCCCCCG
GAGCAGCTGCTTTACTGCGAGGATTGCCATCAGATCAAGTGCCCGCGATG
CATAACCGAGGAGATTGTGTGCTGGTACTGTCCGAACTGCCTGTTCGAGA
CGCCCAGCAGTATGGTCCGGAGTGAGGGAAATCGATGTGCTCGCAATTGC
TTCAATTGCCCGATATGCACCGCCCCTCTGGGCGTCAACACCCTCGAAAA
CGTCGTGACAGGCGGCACCAGCCAACAAGGCCCCTGGGTGTTGTCCTGCG
GATACTGCATGTGGTCGACGCTGGATATTGGCATCAAGTTCGATAAACCG
ACCAACATTCGGACTCAATTGTCCAAGATGACCGAAATCACTCCTGCTCG
CTCGAGACAAATGTCCCGGACGTTCGGGGATCTCAAATCTCCCCTCTCCA
CATACTCTTCTATCGACGAGCACTTCCCACCGCCAGGAGAGAATAAGCCC
GAAGACTCTCCTCTAGACCAGCCCAGCGCTCCTCTCACCCCAGATGCCCG
ATTCCACGCACTCAAGAACTTCTACAAGAACCAAATCTCTGCGACATCCT
CCTCCCCAACCGACCCCCTAGGCATGGACTTCGGCTCCGGCTTCTCCTCC
CCCGGTGCCCTAAACCGCATCATGTCTCTCTACACCTCCTCATCCCGCCT
CAGCAGCCTCTACGGCGGAGCCAACAAAAAGCCCAAAACCAAACCACCCG
TCATGCGAGAAGCCCTCACAGCCAGCGAGGGGCTCAAGATCCCCTCCCCA
GACGCCGAAGACACGCTGATCCAACGCATGTCCTCCCCGGACTGCGGATG
GGACGGCCTCGCCTCCATCGAACAACGCGGCTTCCAATCTCCTGATGCCC
GGTTCGTAGAGGACCTCCTCCCGCTGCCCGTGTTACTTCGCACGAAGCGG
TCCAAACGATGCAAGTCGTGCAAGCACATCCTTGTCAAACCCGAACTGAA
ACCACAGTCCACGCGGTTCCGCATCCGCCTGATTGCCTTCAGCTACATTC
CCTTACCGACGTTACGGCCGCTGAATCCCAGTCCCTCCCCAGCCACCACC
ACCACCACTACCACCGTTCTCCCGACGCCCTCAAGTTCCACGACGAACCC
GAACCTGGACGCTCTCTCCCCGCTCCGACCCATCCAACTCCTCCTCACGC
TGAAGAATCACATGTTCGATCCCGTCCGCGTCACACTCGCCACGCCATCC
GTCACCCCGGGCCGCGTGGCCTCCAAAGTAACTATCCTCTGTCCGCAATT
CGACATTGGCGCCAACAGCGATGTGTGGGACGAAGCCCTCCAGGGTACTT
CGGCTACCACTACTACCACTGCTGCCGCGGGCACAGGAACTGACCCCCGC
GGATCCCGATCCGGAGGGCTAGGCGTGTATGAGAAAGTCGCCGAGGCCGG
GAAAGTCTGGGACAAGGGACGGAACTGGACCACCGTGGTGTTGGAAGTCG
TACCAGGGACATTACCTGGTGGTGCGAAAGAACCCTCCTCCTCTACCAAC
AAGACCAAGAAAGACAAGACGAAGAAGAAGAGCCCTACCGATGACTTAGA
CGACCAAGATGAGAACTCTGACGATGACGAGTCCGACTCTGACCCGGGTT
TCGACTGGAGCGGACAGACATCTGATCCCAACCAGCAGTTACAGCCGGAT
GAAGATGTGCTGGAGATTCCGGTGTTTGTGCATATGGAGTGGGATTCGGA
TAATCAGATTGATAGTGAACAGGCGGTCGGAAGGGCCGGGACGGGTGGGA
GTGATACGGTTAAGAGGGAGTTGGCGTATTGGATGGTGTTGGGGGTGGGG
AGAATTGTGAGGGAGATTGTGTAGATGTCACGCCCCTTCCCTTACACCTT
CATATCTTGTCCTTGCGCCAATATCCCCGTTCCTGACCCGGCGAAGAAAC
GGAGGTCCAGGGAGTCGCCGCAGAAATCCAACAACCCCGATCAACCCAAA
CCTCTCCTGCGCCCGGATGACGACGAAGATGAACAGGCTTTCGATCCTCG
GTCTCCGCGCGCCAATTTCTCTCTGTATCCCCCGGAGCAGCTGCTTTACT
GCGAGGATTGCCATCAGATCAAGTGCCCGCGATGCATAACCGAGGAGATT
GTGTGCTGGTACTGTCCGAACTGCCTGTTCGAGACGCCCAGCAGTATGGT
CCGGAGTGAGGGAAATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0005869 | dynactin complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006105-T1.utr3p1 | KJC3_006105-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008603 |
| DBxref | PFAM:PF05502 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4697508..4699903 - |
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